deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: r-api-4.0, r-api-bioc-3.19, r-bioc-limma (>= 3.60.3), r-bioc-dexseq (>=
1.50.0), r-bioc-saturn (>= 1.12.0), r-bioc-sva (>= 3.52.0), r-cran-ggplot2 (>=
3.3.5), r-bioc-pfamanalyzer (>= 1.4.0), r-bioc-bsgenome (>= 1.72.0), r-cran-plyr,
r-cran-reshape2, r-cran-gridextra, r-bioc-biostrings (>= 2.72.1), r-bioc-iranges
(>= 2.38.1), r-bioc-genomicranges (>= 1.56.1), r-cran-rcolorbrewer, r-bioc-rtracklayer
(>= 1.64.0), r-cran-venndiagram, r-cran-dbi, r-bioc-genomeinfodb (>= 1.40.1),
r-bioc-tximport (>= 1.32.0), r-bioc-tximeta (>= 1.22.1), r-bioc-edger (>= 4.2.0),
r-cran-futile.logger, r-cran-stringr, r-cran-dplyr, r-cran-magrittr, r-cran-readr,
r-cran-tibble, r-bioc-xvector (>= 0.44.0), r-bioc-biocgenerics (>= 0.50.0), r-cran-rcurl,
r-bioc-biobase (>= 2.64.0), r-bioc-summarizedexperiment (>= 1.34.0), r-cran-tidyr,
r-bioc-s4vectors (>= 0.42.1), r-bioc-biocparallel (>= 1.38.0), r-bioc-pwalign
(>= 1.0.0-2~0exp1)
Description: |-
Identify, Annotate and Visualize Alternative Splicing and
Isoform Switches with Functional Consequences from both short- and
long-read RNA-seq data. Analysis of alternative splicing and
isoform switches with predicted functional consequences (e.g.
gain/loss of protein domains etc.) from quantification of all
types of RNASeq by tools such as Kallisto, Salmon, StringTie,
Cufflinks/Cuffdiff etc.
Homepage: https://bioconductor.org/packages/IsoformSwitchAnalyzeR/
Installed-Size: '4718'
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Package: r-bioc-isoformswitchanalyzer
Priority: optional
Section: gnu-r
Suggests: r-cran-knitr, r-cran-rmarkdown
Version: 2.4.0+ds-1
srcpkg_name: r-bioc-isoformswitchanalyzer
srcpkg_version: 2.4.0+ds-1