Artifact libslow5lib_0.7.0+dfsg-3+bd1_arm64-2024-09-26T09:24:49Z

Metadata
bd_uninstallable: null
filename: libslow5lib_0.7.0+dfsg-3+bd1_arm64-2024-09-26T09:24:49Z.build
source: libslow5lib
version: 0.7.0+dfsg-3

File

libslow5lib_0.7.0+dfsg-3+bd1_arm64-2024-09-26T09:24:49Z.build
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sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-01.freexian.com

+==============================================================================+
| libslow5lib 0.7.0+dfsg-3+bd1 (arm64)         Thu, 26 Sep 2024 09:24:49 +0000 |
+==============================================================================+

Package: libslow5lib
Version: 0.7.0+dfsg-3+bd1
Source Version: 0.7.0+dfsg-3
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: any

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/807048/system.tar.xz to /tmp/tmp.sbuild.jz5A2N7_pO...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy-dbgsym_2.1.1+ds-3_amd64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy-dev_2.1.1+ds-3_amd64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy_2.1.1+ds-3_amd64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-zqfp_gt8/python-numpy-doc_2.1.1+ds-3_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/libslow5lib-t1FcNS/resolver-O69ayl' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ InRelease
Ign:1 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ InRelease
Get:2 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ Release [606 B]
Get:4 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ Release.gpg
Ign:4 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ Release.gpg
Get:5 file:/build/libslow5lib-t1FcNS/resolver-b4Gt0B/apt_archive ./ Packages [4543 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9861 kB]
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The following packages will be upgraded:
  libc-bin libc6
2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
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Setting up libc-bin (2.40-3) ...
Processing triggers for man-db (2.13.0-1) ...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/tmp/debusine-fetch-exec-upload-zqfp_gt8/libslow5lib_0.7.0+dfsg-3.dsc exists in /tmp/debusine-fetch-exec-upload-zqfp_gt8; copying to chroot
I: NOTICE: Log filtering will replace 'build/libslow5lib-t1FcNS/libslow5lib-0.7.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libslow5lib-t1FcNS' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), dh-python, python3-all-dev, libstreamvbyte-dev, libzstd-dev, zlib1g-dev, cython3, python3-setuptools, python3-numpy, python3-wheel, build-essential, fakeroot, dumb-init
Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), dh-python, python3-all-dev, libstreamvbyte-dev, libzstd-dev, zlib1g-dev, cython3, python3-setuptools, python3-numpy, python3-wheel, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [818 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [843 B]
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Get:1 file:/<<BUILDDIR>>/resolver-b4Gt0B/apt_archive ./ InRelease
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Get:2 file:/<<BUILDDIR>>/resolver-b4Gt0B/apt_archive ./ Release [606 B]
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Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cmake cmake-data
  cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 d-shlibs
  debhelper dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz
  fakeroot g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
  gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libarchive13t64
  libasan8 libatomic1 libblas3 libbrotli1 libc-dev-bin libc6-dev libcc1-0
  libcrypt-dev libcurl4t64 libdebhelper-perl libelf1t64 libexpat1
  libexpat1-dev libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev
  libgfortran5 libgssapi-krb5-2 libhwasan0 libisl23 libitm1 libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp25 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblsan0 libmpc3 libmpfr6
  libncursesw6 libnghttp2-14 libnsl2 libproc2-0 libpsl5t64 libpython3-all-dev
  libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
  libpython3.12-stdlib libpython3.12t64 librhash0 librtmp1 libsasl2-2
  libsasl2-modules-db libssh2-1t64 libstdc++-14-dev libstreamvbyte-dev
  libstreamvbyte0 libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  libuv1t64 libzstd-dev linux-libc-dev m4 media-types po-debconf procps
  python3 python3-all python3-all-dev python3-autocommand python3-dev
  python3-inflect python3-jaraco.context python3-jaraco.functools
  python3-minimal python3-more-itertools python3-numpy python3-pkg-resources
  python3-setuptools python3-typeguard python3-typing-extensions python3-wheel
  python3-zipp python3.12 python3.12-dev python3.12-minimal rpcsvc-proto
  zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
  elpa-cmake-mode ninja-build cpp-doc gcc-14-locales cpp-14-doc cython-doc
  dh-make flit python3-build python3-installer gcc-14-doc gcc-multilib
  manpages-dev flex bison gdb gcc-doc gdb-aarch64-linux-gnu lrzip
  libc-devtools glibc-doc krb5-doc krb5-user libstdc++-14-doc libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-doc
  python3-tk python3-venv gfortran python-numpy-doc python3-pytest
  python-setuptools-doc python3.12-venv python3.12-doc binfmt-support
Recommended packages:
  manpages manpages-dev libarchive-cpio-perl javascript-common krb5-locales
  libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev
  libmail-sendmail-perl psmisc linux-sysctl-defaults
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cmake cmake-data
  cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 d-shlibs
  debhelper dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz
  fakeroot g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc
  gcc-14 gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libarchive13t64
  libasan8 libatomic1 libblas3 libbrotli1 libc-dev-bin libc6-dev libcc1-0
  libcrypt-dev libcurl4t64 libdebhelper-perl libelf1t64 libexpat1
  libexpat1-dev libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev
  libgfortran5 libgssapi-krb5-2 libhwasan0 libisl23 libitm1 libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp25 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblsan0 libmpc3 libmpfr6
  libncursesw6 libnghttp2-14 libnsl2 libproc2-0 libpsl5t64 libpython3-all-dev
  libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
  libpython3.12-stdlib libpython3.12t64 librhash0 librtmp1 libsasl2-2
  libsasl2-modules-db libssh2-1t64 libstdc++-14-dev libstreamvbyte-dev
  libstreamvbyte0 libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  libuv1t64 libzstd-dev linux-libc-dev m4 media-types po-debconf procps
  python3 python3-all python3-all-dev python3-autocommand python3-dev
  python3-inflect python3-jaraco.context python3-jaraco.functools
  python3-minimal python3-more-itertools python3-numpy python3-pkg-resources
  python3-setuptools python3-typeguard python3-typing-extensions python3-wheel
  python3-zipp python3.12 python3.12-dev python3.12-minimal rpcsvc-proto
  sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 118 newly installed, 0 to remove and 0 not upgraded.
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Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [992 B]
Get:2 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.6-1 [806 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.3-1 [90.2 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.6-1 [1935 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 python3-minimal arm64 3.12.6-1 [26.7 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2 [124 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B]
Get:11 http://deb.debian.org/debian sid/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3 [78.4 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b2 [37.7 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.6-1 [1898 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.6-1 [669 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libpython3-stdlib arm64 3.12.6-1 [9692 B]
Get:19 http://deb.debian.org/debian sid/main arm64 python3 arm64 3.12.6-1 [27.8 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libproc2-0 arm64 2:4.0.4-5 [61.3 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 procps arm64 2:4.0.4-5 [868 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.10.11-1 [2399 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-5 [9161 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-5 [1280 B]
Get:37 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.1.0-2 [4792 B]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.1.0-2 [1572 B]
Get:39 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-5 [42.0 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-5 [24.2 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libatomic1 arm64 14.2.0-5 [10.1 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-5 [2578 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-5 [1162 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-5 [2385 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-5 [1040 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-5 [1442 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-5 [2363 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-5 [17.7 MB]
Get:49 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-5 [513 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.1.0-2 [1440 B]
Get:51 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.1.0-2 [5136 B]
Get:52 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-5 [2263 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-5 [10.1 MB]
Get:54 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-5 [19.7 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.1.0-2 [1200 B]
Get:56 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.1.0-2 [1328 B]
Get:57 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.10 [4516 B]
Get:58 http://deb.debian.org/debian sid/main arm64 libarchive13t64 arm64 3.7.4-1 [323 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b4 [292 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3 [174 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 libnghttp2-14 arm64 1.63.0-1 [71.2 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 libssh2-1t64 arm64 1.11.0-7 [208 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 libcurl4t64 arm64 8.10.1-1 [322 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 libjsoncpp25 arm64 1.9.5-6+b2 [73.2 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 librhash0 arm64 1.4.3-3+b1 [127 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 libuv1t64 arm64 1.48.0-6 [142 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 cmake-data all 3.30.3-1 [2221 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 cmake arm64 3.30.3-1 [9398 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 cython3 arm64 3.0.11+dfsg-1 [2192 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 d-shlibs all 0.107 [11.0 kB]
Get:75 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:80 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.191-2 [188 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.4.0-1 [63.7 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:90 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.0.2-1 [11.7 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 74.1.2-2 [736 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20240824 [109 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-5 [361 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:104 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.6-1 [1981 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.6-1 [4782 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 libpython3-dev arm64 3.12.6-1 [9952 B]
Get:109 http://deb.debian.org/debian sid/main arm64 libpython3-all-dev arm64 3.12.6-1 [1064 B]
Get:110 http://deb.debian.org/debian sid/main arm64 libstreamvbyte0 arm64 0.4.1-4+b1 [6028 B]
Get:111 http://deb.debian.org/debian sid/main arm64 libstreamvbyte-dev arm64 0.4.1-4+b1 [6744 B]
Get:112 http://deb.debian.org/debian sid/main arm64 libzstd-dev arm64 1.5.6+dfsg-1 [330 kB]
Get:113 http://deb.debian.org/debian sid/main arm64 python3-all arm64 3.12.6-1 [1040 B]
Get:114 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.6-1 [506 kB]
Get:115 http://deb.debian.org/debian sid/main arm64 python3-dev arm64 3.12.6-1 [26.1 kB]
Get:116 http://deb.debian.org/debian sid/main arm64 python3-all-dev arm64 3.12.6-1 [1068 B]
Get:117 http://deb.debian.org/debian sid/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB]
Get:118 http://deb.debian.org/debian sid/main arm64 python3-wheel all 0.44.0-2 [53.4 kB]
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+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

W: Extra package /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy-dbgsym_2.1.1+ds-3_amd64.deb of architecture amd64 cannot be installed in the chroot
W: Extra package /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy-dev_2.1.1+ds-3_amd64.deb of architecture amd64 cannot be installed in the chroot
W: Extra package /tmp/debusine-fetch-exec-upload-zqfp_gt8/python3-numpy_2.1.1+ds-3_amd64.deb of architecture amd64 cannot be installed in the chroot
Arch check ok (arm64 included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-25-cloud-arm64 #1 SMP Debian 6.1.106-3 (2024-08-26) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-5 gcc-14_14.2.0-5 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-5 libstdc++6_14.2.0-5 linux-libc-dev_6.10.11-1
Package versions: apt_2.9.8 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.32-1+b1 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-8 bsdutils_1:2.40.2-8 build-essential_12.10 bzip2_1.0.8-6 ca-certificates_20240203 cmake_3.30.3-1 cmake-data_3.30.3-1 coreutils_9.4-3.1 cpp_4:14.1.0-2 cpp-14_14.2.0-5 cpp-14-aarch64-linux-gnu_14.2.0-5 cpp-aarch64-linux-gnu_4:14.1.0-2 cython3_3.0.11+dfsg-1 d-shlibs_0.107 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20240824 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.1.0-2 g++-14_14.2.0-5 g++-14-aarch64-linux-gnu_14.2.0-5 g++-aarch64-linux-gnu_4:14.1.0-2 gcc_4:14.1.0-2 gcc-14_14.2.0-5 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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

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Hash: SHA512

Format: 3.0 (quilt)
Source: libslow5lib
Binary: libslow5-0t64, libslow5-dev, python3-slow5
Architecture: any
Version: 0.7.0+dfsg-3
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: https://github.com/hasindu2008/slow5lib
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/libslow5lib
Vcs-Git: https://salsa.debian.org/med-team/libslow5lib.git
Testsuite: autopkgtest
Testsuite-Triggers: build-essential, libstreamvbyte-dev, python3-all, zlib1g-dev
Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), dh-python, python3-all-dev, libstreamvbyte-dev, libzstd-dev, zlib1g-dev, cython3, python3-setuptools, python3-numpy, python3-wheel
Package-List:
 libslow5-0t64 deb libs optional arch=any
 libslow5-dev deb libdevel optional arch=any
 python3-slow5 deb python optional arch=any
Checksums-Sha1:
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Files:
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gpgv: Signature made Wed Jul 24 20:44:11 2024 UTC
gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv:                issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libslow5lib_0.7.0+dfsg-3.dsc: no acceptable signature found
dpkg-source: info: extracting libslow5lib in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libslow5lib_0.7.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking libslow5lib_0.7.0+dfsg-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying use_debian_packaged_streamvbyte.patch
dpkg-source: info: applying enable_shared_and_static.patch
dpkg-source: info: applying fix-baseline.patch
dpkg-source: info: applying hardening.patch

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 0.7.0+dfsg-3+bd1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -mDebusine Rebuild <debusine@example.net> -B -rfakeroot
dpkg-buildpackage: info: source package libslow5lib
dpkg-buildpackage: info: source version 0.7.0+dfsg-3+bd1
dpkg-buildpackage: info: source distribution sid
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --with python3 --buildsystem=cmake
   dh_auto_clean -O--buildsystem=cmake
   dh_autoreconf_clean -O--buildsystem=cmake
   dh_clean -O--buildsystem=cmake
 debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=cmake
   dh_update_autotools_config -a -O--buildsystem=cmake
   dh_autoreconf -a -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
                -DSLOW5_USE_ZSTD="ON"
	cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSLOW5_USE_ZSTD=ON ..
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done (1.0s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_FIND_USE_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu
dh_auto_configure --buildsystem=pybuild
I: pybuild base:311: dh_auto_configure --buildsystem=cmake --builddirectory=/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_slow5/build -- -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3.12 -DPYTHON_LIBRARY:FILEPATH=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.12 -DPython_EXECUTABLE=/usr/bin/python3.12 -DPython_LIBRARY=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPython_INCLUDE_DIR=/usr/include/python3.12 -DPython3_EXECUTABLE=/usr/bin/python3.12 -DPython3_LIBRARY=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPython3_INCLUDE_DIR=/usr/include/python3.12 
	cd .pybuild/cpython3_3.12_slow5/build && PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3.12 -DPYTHON_LIBRARY:FILEPATH=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.12 -DPython_EXECUTABLE=/usr/bin/python3.12 -DPython_LIBRARY=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPython_INCLUDE_DIR=/usr/include/python3.12 -DPython3_EXECUTABLE=/usr/bin/python3.12 -DPython3_LIBRARY=/usr/lib/python3.12/config-3.12-aarch64-linux-gnu/libpython3.12.so -DPython3_INCLUDE_DIR=/usr/include/python3.12 ../../..
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done (1.0s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_FIND_USE_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED
    PYTHON_EXECUTABLE
    PYTHON_INCLUDE_DIR
    PYTHON_LIBRARY
    Python3_EXECUTABLE
    Python3_INCLUDE_DIR
    Python3_LIBRARY
    Python_EXECUTABLE
    Python_INCLUDE_DIR
    Python_LIBRARY


-- Build files have been written to: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_slow5/build
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
	cd obj-aarch64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make  -f CMakeFiles/slow5_static.dir/build.make CMakeFiles/slow5_static.dir/depend
make  -f CMakeFiles/slow5.dir/build.make CMakeFiles/slow5.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles/slow5_static.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles/slow5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make  -f CMakeFiles/slow5_static.dir/build.make CMakeFiles/slow5_static.dir/build
make  -f CMakeFiles/slow5.dir/build.make CMakeFiles/slow5.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
[ 60%] Building C object CMakeFiles/slow5_static.dir/src/slow5_idx.c.o
[ 60%] Building C object CMakeFiles/slow5_static.dir/src/slow5_press.c.o
[ 60%] Building C object CMakeFiles/slow5_static.dir/src/slow5_misc.c.o
[ 60%] Building C object CMakeFiles/slow5.dir/src/slow5_idx.c.o
[ 60%] Building C object CMakeFiles/slow5.dir/src/slow5_misc.c.o
[ 60%] Building C object CMakeFiles/slow5.dir/src/slow5_press.c.o
/usr/bin/cc -D_GLIBCXX_DEBUG -I/<<PKGBUILDDIR>>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5_press.c.o -MF CMakeFiles/slow5_static.dir/src/slow5_press.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5_press.c.o -c /<<PKGBUILDDIR>>/src/slow5_press.c
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/usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/<<PKGBUILDDIR>>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5_misc.c.o -MF CMakeFiles/slow5.dir/src/slow5_misc.c.o.d -o CMakeFiles/slow5.dir/src/slow5_misc.c.o -c /<<PKGBUILDDIR>>/src/slow5_misc.c
/usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/<<PKGBUILDDIR>>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5_press.c.o -MF CMakeFiles/slow5.dir/src/slow5_press.c.o.d -o CMakeFiles/slow5.dir/src/slow5_press.c.o -c /<<PKGBUILDDIR>>/src/slow5_press.c
[ 70%] Building C object CMakeFiles/slow5.dir/src/slow5.c.o
/usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/<<PKGBUILDDIR>>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5.c.o -MF CMakeFiles/slow5.dir/src/slow5.c.o.d -o CMakeFiles/slow5.dir/src/slow5.c.o -c /<<PKGBUILDDIR>>/src/slow5.c
[ 80%] Building C object CMakeFiles/slow5_static.dir/src/slow5.c.o
/usr/bin/cc -D_GLIBCXX_DEBUG -I/<<PKGBUILDDIR>>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5.c.o -MF CMakeFiles/slow5_static.dir/src/slow5.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5.c.o -c /<<PKGBUILDDIR>>/src/slow5.c
[ 90%] Linking C shared library libslow5.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/slow5.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libslow5.so.0 -o libslow5.so.0 CMakeFiles/slow5.dir/src/slow5.c.o CMakeFiles/slow5.dir/src/slow5_idx.c.o CMakeFiles/slow5.dir/src/slow5_misc.c.o CMakeFiles/slow5.dir/src/slow5_press.c.o  -lzstd
[100%] Linking C static library libslow5_static.a
/usr/bin/cmake -P CMakeFiles/slow5_static.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_symlink_library libslow5.so.0 libslow5.so.0 libslow5.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/slow5_static.dir/link.txt --verbose=1
/usr/bin/ar qc libslow5_static.a CMakeFiles/slow5_static.dir/src/slow5.c.o CMakeFiles/slow5_static.dir/src/slow5_idx.c.o CMakeFiles/slow5_static.dir/src/slow5_misc.c.o CMakeFiles/slow5_static.dir/src/slow5_press.c.o
/usr/bin/ranlib libslow5_static.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
[100%] Built target slow5
[100%] Built target slow5_static
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
for py in `py3versions -s`; do \
	$py setup.py build; \
done
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!

        ********************************************************************************
        Requirements should be satisfied by a PEP 517 installer.
        If you are using pip, you can try `pip install --use-pep517`.
        ********************************************************************************

!!
  dist.fetch_build_eggs(dist.setup_requires)
running build
running build_ext
Compiling python/pyslow5.pyx because it changed.
[1/1] Cythonizing python/pyslow5.pyx
building 'pyslow5' extension
creating build
creating build/temp.linux-aarch64-cpython-312
creating build/temp.linux-aarch64-cpython-312/python
creating build/temp.linux-aarch64-cpython-312/src
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c python/pyslow5.c -o build/temp.linux-aarch64-cpython-312/python/pyslow5.o -g -Wall -O2 -std=c99
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from python/pyslow5.c:1294:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
python/pyslow5.c: In function ‘__pyx_pf_7pyslow5_4Open_62write_record_batch’:
python/pyslow5.c:46426:14: warning: ‘__pyx_v_ret’ may be used uninitialized [-Wmaybe-uninitialized]
46426 |           if (__pyx_t_5) {
      |              ^
python/pyslow5.c:42930:8: note: ‘__pyx_v_ret’ was declared here
42930 |   long __pyx_v_ret;
      |        ^~~~~~~~~~~
python/pyslow5.c: In function ‘__pyx_pf_7pyslow5_4Open_60write_record’:
python/pyslow5.c:42319:10: warning: ‘__pyx_v_ret’ may be used uninitialized [-Wmaybe-uninitialized]
42319 |       if (__pyx_t_7) {
      |          ^
python/pyslow5.c:40075:8: note: ‘__pyx_v_ret’ was declared here
40075 |   long __pyx_v_ret;
      |        ^~~~~~~~~~~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c python/slow5threads.c -o build/temp.linux-aarch64-cpython-312/python/slow5threads.o -g -Wall -O2 -std=c99
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/slow5.c -o build/temp.linux-aarch64-cpython-312/src/slow5.o -g -Wall -O2 -std=c99
src/slow5.c: In function ‘slow5_init’:
src/slow5.c:191:51: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  191 |     if ((s5p->meta.start_rec_offset = ftello(fp)) == -1) {
      |                                                   ^~
src/slow5.c: In function ‘slow5_init_empty’:
src/slow5.c:265:51: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  265 |     if ((s5p->meta.start_rec_offset = ftello(fp)) == -1) {
      |                                                   ^~
src/slow5.c: In function ‘slow5_get_mem’:
src/slow5.c:2460:49: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 2460 |     if (pread(s5p->meta.fd, mem, bytes, offset) != bytes) {
      |                                                 ^~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/slow5_idx.c -o build/temp.linux-aarch64-cpython-312/src/slow5_idx.o -g -Wall -O2 -std=c99
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/slow5_misc.c -o build/temp.linux-aarch64-cpython-312/src/slow5_misc.o -g -Wall -O2 -std=c99
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/slow5_press.c -o build/temp.linux-aarch64-cpython-312/src/slow5_press.o -g -Wall -O2 -std=c99
src/slow5_press.c: In function ‘slow5_fwrite_compress’:
src/slow5_press.c:558:27: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  558 |                 if (bytes != size * nmemb || ferror(fp)) {
      |                           ^~
src/slow5_press.c:559:31: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  559 |                     if (bytes != size * nmemb) {
      |                               ^~
src/slow5_press.c: In function ‘slow5_pread_depress_solo’:
src/slow5_press.c:686:47: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  686 |     if ((ret = pread(fd, raw, count, offset)) != count) {
      |                                               ^~
creating build/lib.linux-aarch64-cpython-312
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/python/pyslow5.o build/temp.linux-aarch64-cpython-312/python/slow5threads.o build/temp.linux-aarch64-cpython-312/src/slow5.o build/temp.linux-aarch64-cpython-312/src/slow5_idx.o build/temp.linux-aarch64-cpython-312/src/slow5_misc.o build/temp.linux-aarch64-cpython-312/src/slow5_press.o -L. -L/usr/lib/aarch64-linux-gnu -lm -lz -lstreamvbyte -o build/lib.linux-aarch64-cpython-312/pyslow5.cpython-312-aarch64-linux-gnu.so
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p lib
cp -a obj-aarch64-linux-gnu/libslow5_static.a lib/libslow5.a
/usr/bin/make -C test zstd=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/test'
mkdir bin
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ endian_test.c -o bin/endian_test -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_helpers.c -o bin/unit_test_helpers -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_press.c -o bin/unit_test_press -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_ascii.c -o bin/unit_test_ascii -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_binary.c -o bin/unit_test_binary -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ convert_slow5_test.c -o bin/convert_slow5_test -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_two_rg.c -o bin/unit_test_two_rg -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_lossless.c -o bin/unit_test_lossless -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_empty.c -o bin/unit_test_empty -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_enum.c -o bin/unit_test_enum -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd
make[2]: Leaving directory '/<<PKGBUILDDIR>>/test'
for pys in `py3versions -s`; do \
                echo $pys; \
                pydir=`$pys debian/get-pyver-dir.py`; \
                echo $pydir; X=0; \
                PYTHONPATH=`pwd`/build/$pydir $pys -m unittest -v python/test.py || X=$?; \
	if [ "" != 0 ]; then exit $X; fi; \
        done
python3.12
lib.linux-aarch64-cpython-312
test_nonExistant_aux (python.test.TestAUX.test_nonExistant_aux) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example2.slow5.idx'.
26-Sep-24 09:26:53 - [WARNING]: get_read unknown aux name: noExistTest
ok
test_read_id (python.test.TestAUX.test_read_id) ... 26-Sep-24 09:26:53 - [WARNING]: get_read unknown aux name: noExistTest
ok
test_read_number (python.test.TestAUX.test_read_number) ... 26-Sep-24 09:26:53 - [WARNING]: get_read unknown aux name: noExistTest
ok
test_start_mux (python.test.TestAUX.test_start_mux) ... 26-Sep-24 09:26:53 - [WARNING]: get_read unknown aux name: noExistTest
ok
test_get_aux_names (python.test.TestAuxAll.test_get_aux_names) ... ok
test_get_aux_types (python.test.TestAuxAll.test_get_aux_types) ... ok
test_get_read_all_aux (python.test.TestAuxAll.test_get_read_all_aux) ... ok
test_seq_reads_pA_aux_all (python.test.TestAuxAll.test_seq_reads_pA_aux_all) ... ok
test_class_methods (python.test.TestBase.test_class_methods) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example.slow5.idx'.
ok
test_digitisation (python.test.TestBase.test_digitisation) ... ok
test_len_raw_signal (python.test.TestBase.test_len_raw_signal) ... ok
test_offset (python.test.TestBase.test_offset) ... ok
test_pylen_signal (python.test.TestBase.test_pylen_signal) ... ok
test_range (python.test.TestBase.test_range) ... ok
test_read_group (python.test.TestBase.test_read_group) ... ok
test_read_id (python.test.TestBase.test_read_id) ... ok
test_read_type (python.test.TestBase.test_read_type) ... ok
test_sampling_rate (python.test.TestBase.test_sampling_rate) ... ok
test_signal (python.test.TestBase.test_signal) ... ok
test_get_all_headers (python.test.TestHeaders.test_get_all_headers) ... ok
test_get_header_names (python.test.TestHeaders.test_get_header_names) ... ok
test_digitisation (python.test.TestRandomAccess.test_digitisation) ... ok
test_len_raw_signal (python.test.TestRandomAccess.test_len_raw_signal) ... ok
test_offset (python.test.TestRandomAccess.test_offset) ... ok
test_pylen_signal (python.test.TestRandomAccess.test_pylen_signal) ... ok
test_range (python.test.TestRandomAccess.test_range) ... ok
test_read_group (python.test.TestRandomAccess.test_read_group) ... ok
test_read_id (python.test.TestRandomAccess.test_read_id) ... ok
test_sampling_rate (python.test.TestRandomAccess.test_sampling_rate) ... ok
test_signal (python.test.TestRandomAccess.test_signal) ... ok
test_seq_reads (python.test.TestSequentialRead.test_seq_reads) ... ok
test_get_empty_header (python.test.TestWrite.test_get_empty_header) ... ok
test_get_empty_record (python.test.TestWrite.test_get_empty_record) ... ok
test_write_header (python.test.TestWrite.test_write_header) ... ok
test_write_records (python.test.TestWrite.test_write_records) ... ok
test_get_empty_aux (python.test.TestWriteAux.test_get_empty_aux) ... ok
test_write_records_aux (python.test.TestWriteAux.test_write_records_aux) ... ok
test_write_matches_read (python.test.TestWriteData.test_write_matches_read) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example_write.slow5.idx'.
ok
test_base_reads (python.test.TestYieldRead.test_base_reads) ... ok
test_reads_with_no_exist (python.test.TestYieldRead.test_reads_with_no_exist) ... [slow5_idx_get::ERROR] Read ID 'null_read' was not found. At src/slow5_idx.c:441
ok
test_seq_reads_multi (python.test.testMultiThreading.test_seq_reads_multi) ... ok
test_get_reads_multi (python.test.testMultiThreadingRandom.test_get_reads_multi) ... ok

----------------------------------------------------------------------
Ran 42 tests in 0.386s

OK
r0
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0d624d4b-671f-40b8-9798-84f2ccc4d7fc
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   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=cmake
   dh_prep -a -O--buildsystem=cmake
   dh_auto_install -a -O--buildsystem=cmake
	cd obj-aarch64-linux-gnu && make -j16 install DESTDIR=/<<BUILDDIR>>/libslow5lib-0.7.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so
-- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0
-- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5_static.a
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5_static.a debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.a
d-shlibmove --commit \
	    --t64 \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
	    --movedev include usr \
	    debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so
Library package automatic movement utility
 --> libzstd-dev package exists.
set -e
install -d -m 755 debian/libslow5-dev/usr/lib/aarch64-linux-gnu
install -d -m 755 debian/libslow5-0t64/usr/lib/aarch64-linux-gnu
mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.a debian/libslow5-dev/usr/lib/aarch64-linux-gnu
mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so debian/libslow5-dev/usr/lib/aarch64-linux-gnu
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0 debian/libslow5-0t64/usr/lib/aarch64-linux-gnu
PKGDEV=libslow5-dev
PKGSHL=libslow5-0t64
install -d -m 755 debian/libslow5-dev/usr
mv include debian/libslow5-dev/usr
dh_install
dh_install -plibslow5-dev src/*.h usr/include/slow5/
dh_install -ppython3-slow5 build/lib.*-*/* usr/lib/python3/dist-packages/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules execute_after_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_numpy3
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=cmake
   dh_installchangelogs -a -O--buildsystem=cmake
   debian/rules override_dh_installexamples
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installexamples
dh_installexamples -ppython3-slow5 python/example.py
dh_installexamples -ppython3-slow5 examples/*.slow5
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_python3 -a -O--buildsystem=cmake
   dh_installsystemduser -a -O--buildsystem=cmake
   dh_lintian -a -O--buildsystem=cmake
   dh_perl -a -O--buildsystem=cmake
   dh_link -a -O--buildsystem=cmake
   dh_strip_nondeterminism -a -O--buildsystem=cmake
   dh_compress -a -O--buildsystem=cmake
   dh_fixperms -a -O--buildsystem=cmake
   dh_missing -a -O--buildsystem=cmake
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dpkg-shlibdeps: warning: symbol streamvbyte_decode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol deflateInit2_ used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol inflateReset used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol inflate used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol inflateEnd used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol inflateInit2_ used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol zigzag_delta_decode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol deflateReset used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol streamvbyte_encode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol deflateEnd used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries
dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all)
   dh_installdeb -a -O--buildsystem=cmake
   dh_gencontrol -a -O--buildsystem=cmake
dpkg-gencontrol: warning: package libslow5-0t64: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: Depends field of package libslow5-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package libslow5-dev: substitution variable ${devlibs:Depends} unused, but is defined
dpkg-gencontrol: warning: package libslow5-dev: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package libslow5-0t64: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake
   dh_builddeb -a -O--buildsystem=cmake
dpkg-deb: building package 'libslow5-0t64' in '../libslow5-0t64_0.7.0+dfsg-3+bd1_arm64.deb'.
dpkg-deb: building package 'libslow5-dev' in '../libslow5-dev_0.7.0+dfsg-3+bd1_arm64.deb'.
dpkg-deb: building package 'libslow5-0t64-dbgsym' in '../libslow5-0t64-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb'.
dpkg-deb: building package 'python3-slow5' in '../python3-slow5_0.7.0+dfsg-3+bd1_arm64.deb'.
dpkg-deb: building package 'python3-slow5-dbgsym' in '../python3-slow5-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb'.
 dpkg-genbuildinfo --build=any -O../libslow5lib_0.7.0+dfsg-3+bd1_arm64.buildinfo
 dpkg-genchanges --build=any -mDebusine Rebuild <debusine@example.net> -O../libslow5lib_0.7.0+dfsg-3+bd1_arm64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-09-26T09:27:02Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


libslow5lib_0.7.0+dfsg-3+bd1_arm64.changes:
-------------------------------------------

Format: 1.8
Date: Thu, 26 Sep 2024 09:25:49 +0000
Source: libslow5lib (0.7.0+dfsg-3)
Binary: libslow5-0t64 libslow5-0t64-dbgsym libslow5-dev python3-slow5 python3-slow5-dbgsym
Binary-Only: yes
Architecture: arm64
Version: 0.7.0+dfsg-3+bd1
Distribution: sid
Urgency: low
Maintainer: Debusine Rebuild <debusine@example.net>
Changed-By: Debusine Rebuild <debusine@example.net>
Description:
 libslow5-0t64 - library for reading & writing SLOW5 files
 libslow5-dev - header and static library for reading & writing SLOW5 files
 python3-slow5 - Python3 modul for reading & writing SLOW5 files
Changes:
 libslow5lib (0.7.0+dfsg-3+bd1) sid; urgency=low, binary-only=yes
 .
   * Append +bd1 to version number; no source changes
   * Binary-only non-maintainer upload for arm64; no source changes.
   * Rebuild for numpy-2
Checksums-Sha1:
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Files:
 1fbb2333778b5241616c831a2c431c1b 178008 debug optional libslow5-0t64-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb
 e0401be8f34954ea340f51e1a1cc8fa3 54616 libs optional libslow5-0t64_0.7.0+dfsg-3+bd1_arm64.deb
 6302116cd31514afbd1098392a092130 79316 libdevel optional libslow5-dev_0.7.0+dfsg-3+bd1_arm64.deb
 053c4f8d88593e9864db9163a4f6ed76 8791 science optional libslow5lib_0.7.0+dfsg-3+bd1_arm64.buildinfo
 c1adf2178b2f78c86f6eab7f60d1bb16 1363804 debug optional python3-slow5-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb
 70896525eb5e61521fffd7daae053a39 391536 python optional python3-slow5_0.7.0+dfsg-3+bd1_arm64.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: libslow5lib (0.7.0+dfsg-3)
Binary: libslow5-0t64 libslow5-0t64-dbgsym libslow5-dev python3-slow5 python3-slow5-dbgsym
Architecture: arm64
Version: 0.7.0+dfsg-3+bd1
Binary-Only-Changes:
 libslow5lib (0.7.0+dfsg-3+bd1) sid; urgency=low, binary-only=yes
 .
   * Append +bd1 to version number; no source changes
   * Binary-only non-maintainer upload for arm64; no source changes.
   * Rebuild for numpy-2
 .
  -- Debusine Rebuild <debusine@example.net>  Thu, 26 Sep 2024 09:25:49 +0000
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Thu, 26 Sep 2024 09:27:02 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 apt (= 2.9.8),
 autoconf (= 2.72-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.22.5-2),
 autotools-dev (= 20220109.1),
 base-files (= 13.5),
 base-passwd (= 3.6.4),
 bash (= 5.2.32-1+b1),
 binutils (= 2.43.1-5),
 binutils-aarch64-linux-gnu (= 2.43.1-5),
 binutils-common (= 2.43.1-5),
 bsdextrautils (= 2.40.2-8),
 bsdutils (= 1:2.40.2-8),
 build-essential (= 12.10),
 bzip2 (= 1.0.8-6),
 cmake (= 3.30.3-1),
 cmake-data (= 3.30.3-1),
 coreutils (= 9.4-3.1),
 cpp (= 4:14.1.0-2),
 cpp-14 (= 14.2.0-5),
 cpp-14-aarch64-linux-gnu (= 14.2.0-5),
 cpp-aarch64-linux-gnu (= 4:14.1.0-2),
 cython3 (= 3.0.11+dfsg-1),
 d-shlibs (= 0.107),
 dash (= 0.5.12-9),
 debconf (= 1.5.87),
 debhelper (= 13.20),
 debian-archive-keyring (= 2023.4),
 debianutils (= 5.20),
 dh-autoreconf (= 20),
 dh-python (= 6.20240824),
 dh-strip-nondeterminism (= 1.14.0-1),
 diffutils (= 1:3.10-1),
 dpkg (= 1.22.11),
 dpkg-dev (= 1.22.11),
 dwz (= 0.15-1+b1),
 file (= 1:5.45-3),
 findutils (= 4.10.0-3),
 g++ (= 4:14.1.0-2),
 g++-14 (= 14.2.0-5),
 g++-14-aarch64-linux-gnu (= 14.2.0-5),
 g++-aarch64-linux-gnu (= 4:14.1.0-2),
 gcc (= 4:14.1.0-2),
 gcc-14 (= 14.2.0-5),
 gcc-14-aarch64-linux-gnu (= 14.2.0-5),
 gcc-14-base (= 14.2.0-5),
 gcc-aarch64-linux-gnu (= 4:14.1.0-2),
 gettext (= 0.22.5-2),
 gettext-base (= 0.22.5-2),
 gpgv (= 2.2.43-8+b1),
 grep (= 3.11-4),
 groff-base (= 1.23.0-5),
 gzip (= 1.12-1.1),
 hostname (= 3.23+nmu2),
 init-system-helpers (= 1.67),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.2-2),
 libapt-pkg6.0t64 (= 2.9.8),
 libarchive-zip-perl (= 1.68-1),
 libarchive13t64 (= 3.7.4-1),
 libasan8 (= 14.2.0-5),
 libatomic1 (= 14.2.0-5),
 libattr1 (= 1:2.5.2-1),
 libaudit-common (= 1:4.0.1-1),
 libaudit1 (= 1:4.0.1-1),
 libbinutils (= 2.43.1-5),
 libblas3 (= 3.12.0-3),
 libblkid1 (= 2.40.2-8),
 libbrotli1 (= 1.1.0-2+b4),
 libbz2-1.0 (= 1.0.8-6),
 libc-bin (= 2.40-3),
 libc-dev-bin (= 2.40-3),
 libc6 (= 2.40-3),
 libc6-dev (= 2.40-3),
 libcap-ng0 (= 0.8.5-2),
 libcap2 (= 1:2.66-5),
 libcc1-0 (= 14.2.0-5),
 libcom-err2 (= 1.47.1-1),
 libcrypt-dev (= 1:4.4.36-5),
 libcrypt1 (= 1:4.4.36-5),
 libctf-nobfd0 (= 2.43.1-5),
 libctf0 (= 2.43.1-5),
 libcurl4t64 (= 8.10.1-1),
 libdb5.3t64 (= 5.3.28+dfsg2-7),
 libdebconfclient0 (= 0.272),
 libdebhelper-perl (= 13.20),
 libdpkg-perl (= 1.22.11),
 libelf1t64 (= 0.191-2),
 libexpat1 (= 2.6.3-1),
 libexpat1-dev (= 2.6.3-1),
 libffi8 (= 3.4.6-1),
 libfile-stripnondeterminism-perl (= 1.14.0-1),
 libgcc-14-dev (= 14.2.0-5),
 libgcc-s1 (= 14.2.0-5),
 libgcrypt20 (= 1.11.0-6),
 libgdbm-compat4t64 (= 1.24-2),
 libgdbm6t64 (= 1.24-2),
 libgfortran5 (= 14.2.0-5),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgnutls30t64 (= 3.8.6-2),
 libgomp1 (= 14.2.0-5),
 libgpg-error0 (= 1.50-4),
 libgprofng0 (= 2.43.1-5),
 libgssapi-krb5-2 (= 1.21.3-3),
 libhogweed6t64 (= 3.10-1),
 libhwasan0 (= 14.2.0-5),
 libicu72 (= 72.1-5),
 libidn2-0 (= 2.3.7-2),
 libisl23 (= 0.27-1),
 libitm1 (= 14.2.0-5),
 libjansson4 (= 2.14-2+b2),
 libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
 libjs-sphinxdoc (= 7.4.7-3),
 libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
 libjsoncpp25 (= 1.9.5-6+b2),
 libk5crypto3 (= 1.21.3-3),
 libkeyutils1 (= 1.6.3-3),
 libkrb5-3 (= 1.21.3-3),
 libkrb5support0 (= 1.21.3-3),
 liblapack3 (= 3.12.0-3),
 libldap-2.5-0 (= 2.5.18+dfsg-3),
 liblsan0 (= 14.2.0-5),
 liblz4-1 (= 1.9.4-3),
 liblzma5 (= 5.6.2-2),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmd0 (= 1.1.0-2),
 libmount1 (= 2.40.2-8),
 libmpc3 (= 1.3.1-1+b2),
 libmpfr6 (= 4.2.1-1+b1),
 libncursesw6 (= 6.5-2),
 libnettle8t64 (= 3.10-1),
 libnghttp2-14 (= 1.63.0-1),
 libnsl2 (= 1.3.0-3+b2),
 libp11-kit0 (= 0.25.5-2),
 libpam-modules (= 1.5.3-7),
 libpam-modules-bin (= 1.5.3-7),
 libpam-runtime (= 1.5.3-7),
 libpam0g (= 1.5.3-7),
 libpcre2-8-0 (= 10.42-4+b1),
 libperl5.38t64 (= 5.38.2-5),
 libpipeline1 (= 1.5.8-1),
 libproc2-0 (= 2:4.0.4-5),
 libpsl5t64 (= 0.21.2-1.1),
 libpython3-all-dev (= 3.12.6-1),
 libpython3-dev (= 3.12.6-1),
 libpython3-stdlib (= 3.12.6-1),
 libpython3.12-dev (= 3.12.6-1),
 libpython3.12-minimal (= 3.12.6-1),
 libpython3.12-stdlib (= 3.12.6-1),
 libpython3.12t64 (= 3.12.6-1),
 libreadline8t64 (= 8.2-5),
 librhash0 (= 1.4.3-3+b1),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4),
 libsasl2-2 (= 2.1.28+dfsg1-8),
 libsasl2-modules-db (= 2.1.28+dfsg1-8),
 libseccomp2 (= 2.5.5-1+b1),
 libselinux1 (= 3.7-3),
 libsframe1 (= 2.43.1-5),
 libsmartcols1 (= 2.40.2-8),
 libsqlite3-0 (= 3.46.1-1),
 libssh2-1t64 (= 1.11.0-7),
 libssl3t64 (= 3.3.2-1),
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 make (= 4.3-4.1),
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 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2),
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 openssl-provider-legacy (= 3.3.2-1),
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 perl-base (= 5.38.2-5),
 perl-modules-5.38 (= 5.38.2-5),
 po-debconf (= 1.0.21+nmu1),
 procps (= 2:4.0.4-5),
 python3 (= 3.12.6-1),
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 python3-dev (= 3.12.6-1),
 python3-inflect (= 7.3.1-2),
 python3-jaraco.context (= 6.0.0-1),
 python3-jaraco.functools (= 4.0.2-1),
 python3-minimal (= 3.12.6-1),
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 python3-pkg-resources (= 74.1.2-2),
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 python3-typeguard (= 4.3.0-1),
 python3-typing-extensions (= 4.12.2-2),
 python3-wheel (= 0.44.0-2),
 python3-zipp (= 3.20.2-1),
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 python3.12-dev (= 3.12.6-1),
 python3.12-minimal (= 3.12.6-1),
 readline-common (= 8.2-5),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.24),
 sysvinit-utils (= 3.10-2),
 tar (= 1.35+dfsg-3),
 tzdata (= 2024a-4),
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 xz-utils (= 5.6.2-2),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
 DEB_BUILD_OPTIONS="parallel=16"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 SOURCE_DATE_EPOCH="1727342749"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


libslow5-0t64-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb
-----------------------------------------------

 new Debian package, version 2.0.
 size 178008 bytes: control archive=564 bytes.
     442 bytes,    13 lines      control
     106 bytes,     1 lines      md5sums
 Package: libslow5-0t64-dbgsym
 Source: libslow5lib (0.7.0+dfsg-3)
 Version: 0.7.0+dfsg-3+bd1
 Auto-Built-Package: debug-symbols
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 198
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 Section: debug
 Priority: optional
 Multi-Arch: same
 Description: debug symbols for libslow5-0t64
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drwxr-xr-x root/root         0 2024-09-26 09:25 ./
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/
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lrwxrwxrwx root/root         0 2024-09-26 09:25 ./usr/share/doc/libslow5-0t64-dbgsym -> libslow5-0t64


libslow5-0t64_0.7.0+dfsg-3+bd1_arm64.deb
----------------------------------------

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     392 bytes,     5 lines      md5sums
      41 bytes,     1 lines      shlibs
    4849 bytes,   155 lines      symbols
      66 bytes,     2 lines      triggers
 Package: libslow5-0t64
 Source: libslow5lib (0.7.0+dfsg-3)
 Version: 0.7.0+dfsg-3+bd1
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 218
 Depends: libc6 (>= 2.33), libzstd1 (>= 1.5.5)
 Conflicts: libslow5-0 (<< 0.7.0+dfsg-3)
 Replaces: libslow5-0
 Provides: libslow5-0 (= 0.7.0+dfsg-3+bd1)
 Section: libs
 Priority: optional
 Multi-Arch: same
 Homepage: https://github.com/hasindu2008/slow5lib
 Description: library for reading & writing SLOW5 files
  Slow5lib is a software library for reading & writing SLOW5 files.
  Slow5lib is designed to facilitate use of data in SLOW5 format by third-
  party software packages. Existing packages that read/write data in FAST5
  format can be easily modified to support SLOW5.
  .
  SLOW5 is a new file format for storing signal data from Oxford Nanopore
  Technologies (ONT) devices. SLOW5 was developed to overcome inherent
  limitations in the standard FAST5 signal data format that prevent
  efficient, scalable analysis and cause many headaches for developers.
  SLOW5 can be encoded in human-readable ASCII format, or a more compact
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  have shown that SLOW5 format is an order of magnitude faster and
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drwxr-xr-x root/root         0 2024-09-26 09:25 ./
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/aarch64-linux-gnu/
-rw-r--r-- root/root    198656 2024-09-26 09:25 ./usr/lib/aarch64-linux-gnu/libslow5.so.0
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drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/doc/
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-rw-r--r-- root/root      2089 2024-07-24 20:36 ./usr/share/doc/libslow5-0t64/copyright
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/lintian/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/lintian/overrides/
-rw-r--r-- root/root        60 2024-07-24 20:36 ./usr/share/lintian/overrides/libslow5-0t64


libslow5-dev_0.7.0+dfsg-3+bd1_arm64.deb
---------------------------------------

 new Debian package, version 2.0.
 size 79316 bytes: control archive=1520 bytes.
    1576 bytes,    31 lines      control
     891 bytes,    13 lines      md5sums
 Package: libslow5-dev
 Source: libslow5lib (0.7.0+dfsg-3)
 Version: 0.7.0+dfsg-3+bd1
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 504
 Depends: libslow5-0t64 (= 0.7.0+dfsg-3+bd1)
 Section: libdevel
 Priority: optional
 Multi-Arch: same
 Homepage: https://github.com/hasindu2008/slow5lib
 Description: header and static library for reading & writing SLOW5 files
  Slow5lib is a software library for reading & writing SLOW5 files.
  Slow5lib is designed to facilitate use of data in SLOW5 format by third-
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  format can be easily modified to support SLOW5.
  .
  SLOW5 is a new file format for storing signal data from Oxford Nanopore
  Technologies (ONT) devices. SLOW5 was developed to overcome inherent
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  efficient, scalable analysis and cause many headaches for developers.
  SLOW5 can be encoded in human-readable ASCII format, or a more compact
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  format supports *zlib* (DEFLATE) compression, or other compression
  methods, thereby minimising the data storage footprint while still
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  .
  This is the development package containing headers and static library.

drwxr-xr-x root/root         0 2024-09-26 09:25 ./
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/
drwxr-xr-x root/root         0 2022-10-07 23:23 ./usr/include/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/include/slow5/
drwxr-xr-x root/root         0 2022-10-07 23:23 ./usr/include/slow5/klib/
-rw-r--r-- root/root     21540 2022-10-07 23:23 ./usr/include/slow5/klib/khash.h
-rw-r--r-- root/root      2880 2022-10-07 23:23 ./usr/include/slow5/klib/kvec.h
-rw-r--r-- root/root     31763 2022-10-07 23:23 ./usr/include/slow5/slow5.h
-rw-r--r-- root/root      7346 2022-10-07 23:23 ./usr/include/slow5/slow5_defs.h
-rw-r--r-- root/root      5357 2022-10-07 23:23 ./usr/include/slow5/slow5_error.h
-rw-r--r-- root/root      6306 2022-10-07 23:23 ./usr/include/slow5/slow5_extra.h
-rw-r--r-- root/root      2069 2022-10-07 23:23 ./usr/include/slow5/slow5_idx.h
-rw-r--r-- root/root      4215 2022-10-07 23:23 ./usr/include/slow5/slow5_misc.h
-rw-r--r-- root/root      6604 2022-10-07 23:23 ./usr/include/slow5/slow5_press.h
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/aarch64-linux-gnu/
-rw-r--r-- root/root    401468 2024-09-26 09:25 ./usr/lib/aarch64-linux-gnu/libslow5.a
lrwxrwxrwx root/root         0 2024-09-26 09:25 ./usr/lib/aarch64-linux-gnu/libslow5.so -> libslow5.so.0
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/doc/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/doc/libslow5-dev/
-rw-r--r-- root/root       224 2024-09-26 09:25 ./usr/share/doc/libslow5-dev/changelog.Debian.arm64.gz
-rw-r--r-- root/root      1080 2024-09-26 09:25 ./usr/share/doc/libslow5-dev/changelog.Debian.gz
-rw-r--r-- root/root      2089 2024-07-24 20:36 ./usr/share/doc/libslow5-dev/copyright


python3-slow5-dbgsym_0.7.0+dfsg-3+bd1_arm64.deb
-----------------------------------------------

 new Debian package, version 2.0.
 size 1363804 bytes: control archive=560 bytes.
     426 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: python3-slow5-dbgsym
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 Version: 0.7.0+dfsg-3+bd1
 Auto-Built-Package: debug-symbols
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1399
 Depends: python3-slow5 (= 0.7.0+dfsg-3+bd1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-slow5
 Build-Ids: f7b3d036a93b0a71d2d6d30d7bb1e904943f6b1a

drwxr-xr-x root/root         0 2024-09-26 09:25 ./
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/debug/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root   1421536 2024-09-26 09:25 ./usr/lib/debug/.build-id/f7/b3d036a93b0a71d2d6d30d7bb1e904943f6b1a.debug
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/
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lrwxrwxrwx root/root         0 2024-09-26 09:25 ./usr/share/doc/python3-slow5-dbgsym -> python3-slow5


python3-slow5_0.7.0+dfsg-3+bd1_arm64.deb
----------------------------------------

 new Debian package, version 2.0.
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    1658 bytes,    30 lines      control
     786 bytes,     9 lines      md5sums
 Package: python3-slow5
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 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 7361
 Depends: libslow5-0t64 (= 0.7.0+dfsg-3+bd1), libc6 (>= 2.34), libstreamvbyte0 (>= 0.4.1), zlib1g (>= 1:1.1.4), python3-numpy (>= 1:1.25.0), python3-numpy-abi9, python3 (<< 3.13), python3 (>= 3.12~)
 Section: python
 Priority: optional
 Homepage: https://github.com/hasindu2008/slow5lib
 Description: Python3 modul for reading & writing SLOW5 files
  Slow5lib is a software library for reading & writing SLOW5 files.
  Slow5lib is designed to facilitate use of data in SLOW5 format by third-
  party software packages. Existing packages that read/write data in FAST5
  format can be easily modified to support SLOW5.
  .
  SLOW5 is a new file format for storing signal data from Oxford Nanopore
  Technologies (ONT) devices. SLOW5 was developed to overcome inherent
  limitations in the standard FAST5 signal data format that prevent
  efficient, scalable analysis and cause many headaches for developers.
  SLOW5 can be encoded in human-readable ASCII format, or a more compact
  and efficient binary format (BLOW5) - this is analogous to the seminal
  SAM/BAM format for storing DNA sequence alignments. The BLOW5 binary
  format supports *zlib* (DEFLATE) compression, or other compression
  methods, thereby minimising the data storage footprint while still
  permitting efficient parallel access. Detailed benchmarking experiments
  have shown that SLOW5 format is an order of magnitude faster and
  significantly smaller than FAST5.
  .
  This is the Python3 module.

drwxr-xr-x root/root         0 2024-09-26 09:25 ./
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/python3/
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/lib/python3/dist-packages/
-rw-r--r-- root/root    796112 2024-09-26 09:25 ./usr/lib/python3/dist-packages/pyslow5.cpython-312-aarch64-linux-gnu.so
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/
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drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/doc/python3-slow5/
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-rw-r--r-- root/root      2089 2024-07-24 20:36 ./usr/share/doc/python3-slow5/copyright
drwxr-xr-x root/root         0 2024-09-26 09:25 ./usr/share/doc/python3-slow5/examples/
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-rw-r--r-- root/root   1194881 2022-10-07 23:23 ./usr/share/doc/python3-slow5/examples/example.slow5
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-rw-r--r-- root/root   1835842 2024-09-26 09:25 ./usr/share/doc/python3-slow5/examples/example_write_aux.slow5


lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
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Warning in processable libslow5lib_0.7.0+dfsg-3.dsc: Argument "v0.902.0" isn't numeric in numeric lt (<) at /usr/share/lintian/lib/Lintian/Check/Debian/Upstream/Metadata.pm line 106.

I: Lintian run was successful.

+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: any
Build-Space: 68928
Build-Time: 72
Distribution: sid
Host Architecture: arm64
Install-Time: 35
Job: /tmp/debusine-fetch-exec-upload-zqfp_gt8/libslow5lib_0.7.0+dfsg-3.dsc
Lintian: pass
Machine Architecture: arm64
Package: libslow5lib
Package-Time: 133
Source-Version: 0.7.0+dfsg-3
Space: 68928
Status: successful
Version: 0.7.0+dfsg-3+bd1
--------------------------------------------------------------------------------
Finished at 2024-09-26T09:27:02Z
Build needed 00:02:13, 68928k disk space

Relations

Relation Direction Type Name
relates-to Source package libslow5lib_0.7.0+dfsg-3
relates-to Binary package python3-numpy-dbgsym_1:2.1.1+ds-3_amd64
relates-to Binary package python3-numpy-dev_1:2.1.1+ds-3_amd64
relates-to Binary package python3-numpy_1:2.1.1+ds-3_amd64
relates-to Binary package python-numpy-doc_1:2.1.1+ds-3_all
relates-to Binary package libslow5-0t64-dbgsym_0.7.0+dfsg-3+bd1_arm64
relates-to Binary package libslow5-0t64_0.7.0+dfsg-3+bd1_arm64
relates-to Binary package libslow5-dev_0.7.0+dfsg-3+bd1_arm64
relates-to Binary package python3-slow5-dbgsym_0.7.0+dfsg-3+bd1_arm64
relates-to Binary package python3-slow5_0.7.0+dfsg-3+bd1_arm64
relates-to Binary packages libslow5lib_0.7.0+dfsg-3

build log System… build a package… - 3 weeks, 2 days ago 0 minutes
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