Uses of Enum Class
org.snpeff.interval.TranscriptSupportLevel
Packages that use TranscriptSupportLevel
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Uses of TranscriptSupportLevel in org.snpeff
Fields in org.snpeff declared as TranscriptSupportLevelModifier and TypeFieldDescriptionprotected TranscriptSupportLevel
SnpEff.maxTranscriptSupportLevel
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Uses of TranscriptSupportLevel in org.snpeff.interval
Methods in org.snpeff.interval that return TranscriptSupportLevelModifier and TypeMethodDescriptionTranscript.getTranscriptSupportLevel()
static TranscriptSupportLevel
static TranscriptSupportLevel
Returns the enum constant of this class with the specified name.static TranscriptSupportLevel[]
TranscriptSupportLevel.values()
Returns an array containing the constants of this enum class, in the order they are declared.Methods in org.snpeff.interval with parameters of type TranscriptSupportLevelModifier and TypeMethodDescriptionvoid
Gene.filterTranscriptSupportLevel
(TranscriptSupportLevel maxTsl) Filter transcripts by TSLvoid
Transcript.setTranscriptSupportLevel
(TranscriptSupportLevel transcriptSupportLevel) static int
TranscriptSupportLevel.tsl
(TranscriptSupportLevel tsl) Return TSL level (-1 if not available / invalid) -
Uses of TranscriptSupportLevel in org.snpeff.snpEffect
Methods in org.snpeff.snpEffect with parameters of type TranscriptSupportLevelModifier and TypeMethodDescriptionvoid
SnpEffectPredictor.filterTranscriptSupportLevel
(TranscriptSupportLevel maxTsl) Filter transcripts by TSL