sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-09.freexian.com
+==============================================================================+
| libbio-db-gff-perl 1.7.4-1 (arm64) Sat, 16 Nov 2024 21:53:43 +0000 |
+==============================================================================+
Package: libbio-db-gff-perl
Version: 1.7.4-1
Source Version: 1.7.4-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary
I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.Lg7iB7gFa8...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Chroot Setup Commands |
+------------------------------------------------------------------------------+
rm -f /etc/resolv.conf
----------------------
I: Finished running 'rm -f /etc/resolv.conf'.
Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-lnxrromf/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/libbio-db-gff-perl-KBzIfH/resolver-wN6kMi' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ InRelease
Ign:1 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ InRelease
Get:2 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:4 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ Release.gpg
Ign:4 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ Release.gpg
Get:5 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ Packages [9246 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9952 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4909 kB]
Fetched 15.1 MB in 2s (6411 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages will be upgraded:
apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
libsemanage2 libsmartcols1 libsystemd0 libudev1 libuuid1 libxml2 login
login.defs mount passwd util-linux
30 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 9274 kB/12.8 MB of archives.
After this operation, 603 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libsystemd0 arm64 257~rc2-3 [416 kB]
Get:6 file:/build/libbio-db-gff-perl-KBzIfH/resolver-7aUz6u/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libudev1 arm64 257~rc2-3 [139 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 login.defs all 1:4.16.0-5 [185 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 passwd arm64 1:4.16.0-5 [1210 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 9274 kB in 0s (63.3 MB/s)
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17129 files and directories currently installed.)
Preparing to unpack .../bsdutils_1%3a2.40.2-11_arm64.deb ...
Unpacking bsdutils (1:2.40.2-11) over (1:2.40.2-10) ...
Setting up bsdutils (1:2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17129 files and directories currently installed.)
Preparing to unpack .../debianutils_5.21_arm64.deb ...
Unpacking debianutils (5.21) over (5.20+b1) ...
Setting up debianutils (5.21) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17128 files and directories currently installed.)
Preparing to unpack .../libsystemd0_257~rc2-3_arm64.deb ...
Unpacking libsystemd0:arm64 (257~rc2-3) over (257~rc1-4) ...
Setting up libsystemd0:arm64 (257~rc2-3) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17128 files and directories currently installed.)
Preparing to unpack .../libudev1_257~rc2-3_arm64.deb ...
Unpacking libudev1:arm64 (257~rc2-3) over (257~rc1-4) ...
Setting up libudev1:arm64 (257~rc2-3) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17128 files and directories currently installed.)
Preparing to unpack .../libapt-pkg6.0t64_2.9.11_arm64.deb ...
Unpacking libapt-pkg6.0t64:arm64 (2.9.11) over (2.9.10) ...
Setting up libapt-pkg6.0t64:arm64 (2.9.11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17128 files and directories currently installed.)
Preparing to unpack .../dpkg_1.22.12~1.gbp82cafd_arm64.deb ...
Unpacking dpkg (1.22.12~1.gbp82cafd) over (1.22.11) ...
Setting up dpkg (1.22.12~1.gbp82cafd) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17127 files and directories currently installed.)
Preparing to unpack .../bsdextrautils_2.40.2-11_arm64.deb ...
Unpacking bsdextrautils (2.40.2-11) over (2.40.2-10) ...
Preparing to unpack .../libblkid1_2.40.2-11_arm64.deb ...
Unpacking libblkid1:arm64 (2.40.2-11) over (2.40.2-10) ...
Setting up libblkid1:arm64 (2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17123 files and directories currently installed.)
Preparing to unpack .../libmount1_2.40.2-11_arm64.deb ...
Unpacking libmount1:arm64 (2.40.2-11) over (2.40.2-10) ...
Setting up libmount1:arm64 (2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17123 files and directories currently installed.)
Preparing to unpack .../libsmartcols1_2.40.2-11_arm64.deb ...
Unpacking libsmartcols1:arm64 (2.40.2-11) over (2.40.2-10) ...
Setting up libsmartcols1:arm64 (2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17123 files and directories currently installed.)
Preparing to unpack .../mount_2.40.2-11_arm64.deb ...
Unpacking mount (2.40.2-11) over (2.40.2-10) ...
Preparing to unpack .../libuuid1_2.40.2-11_arm64.deb ...
Unpacking libuuid1:arm64 (2.40.2-11) over (2.40.2-10) ...
Setting up libuuid1:arm64 (2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17123 files and directories currently installed.)
Preparing to unpack .../util-linux_2.40.2-11_arm64.deb ...
Unpacking util-linux (2.40.2-11) over (2.40.2-10) ...
Setting up util-linux (2.40.2-11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17120 files and directories currently installed.)
Preparing to unpack .../libpcre2-8-0_10.44-4_arm64.deb ...
Unpacking libpcre2-8-0:arm64 (10.44-4) over (10.42-4+b2) ...
Setting up libpcre2-8-0:arm64 (10.44-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17119 files and directories currently installed.)
Preparing to unpack .../libselinux1_3.7-3+b1_arm64.deb ...
Unpacking libselinux1:arm64 (3.7-3+b1) over (3.7-3) ...
Setting up libselinux1:arm64 (3.7-3+b1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17120 files and directories currently installed.)
Preparing to unpack .../libseccomp2_2.5.5-1+b3_arm64.deb ...
Unpacking libseccomp2:arm64 (2.5.5-1+b3) over (2.5.5-1+b2) ...
Setting up libseccomp2:arm64 (2.5.5-1+b3) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17120 files and directories currently installed.)
Preparing to unpack .../archives/apt_2.9.11_arm64.deb ...
Unpacking apt (2.9.11) over (2.9.10) ...
Setting up apt (2.9.11) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17117 files and directories currently installed.)
Preparing to unpack .../libaudit-common_1%3a4.0.2-2_all.deb ...
Unpacking libaudit-common (1:4.0.2-2) over (1:4.0.1-3) ...
Setting up libaudit-common (1:4.0.2-2) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17117 files and directories currently installed.)
Preparing to unpack .../libcap-ng0_0.8.5-3+b1_arm64.deb ...
Unpacking libcap-ng0:arm64 (0.8.5-3+b1) over (0.8.5-3) ...
Setting up libcap-ng0:arm64 (0.8.5-3+b1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17118 files and directories currently installed.)
Preparing to unpack .../libaudit1_1%3a4.0.2-2_arm64.deb ...
Unpacking libaudit1:arm64 (1:4.0.2-2) over (1:4.0.1-3) ...
Setting up libaudit1:arm64 (1:4.0.2-2) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17118 files and directories currently installed.)
Preparing to unpack .../0-login_1%3a4.16.0-2+really2.40.2-11_arm64.deb ...
Unpacking login (1:4.16.0-2+really2.40.2-11) over (1:4.16.0-2+really2.40.2-10) ...
Preparing to unpack .../1-login.defs_1%3a4.16.0-5_all.deb ...
Unpacking login.defs (1:4.16.0-5) over (1:4.16.0-4) ...
Preparing to unpack .../2-libsemanage2_3.7-2+b1_arm64.deb ...
Unpacking libsemanage2:arm64 (3.7-2+b1) over (3.7-2) ...
Preparing to unpack .../3-passwd_1%3a4.16.0-5_arm64.deb ...
Unpacking passwd (1:4.16.0-5) over (1:4.16.0-4) ...
Preparing to unpack .../4-dpkg-dev_1.22.12~1.gbp82cafd_all.deb ...
Unpacking dpkg-dev (1.22.12~1.gbp82cafd) over (1.22.11) ...
Preparing to unpack .../5-libdpkg-perl_1.22.12~1.gbp82cafd_all.deb ...
Unpacking libdpkg-perl (1.22.12~1.gbp82cafd) over (1.22.11) ...
Preparing to unpack .../6-libbrotli1_1.1.0-2+b6_arm64.deb ...
Unpacking libbrotli1:arm64 (1.1.0-2+b6) over (1.1.0-2+b5) ...
Preparing to unpack .../7-libglib2.0-0t64_2.82.2-3_arm64.deb ...
Unpacking libglib2.0-0t64:arm64 (2.82.2-3) over (2.82.2-2) ...
Preparing to unpack .../8-libmarkdown2_2.2.7-2.1_arm64.deb ...
Unpacking libmarkdown2:arm64 (2.2.7-2.1) over (2.2.7-2+b1) ...
Preparing to unpack .../9-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ...
Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) over (2.12.7+dfsg+really2.9.14-0.1) ...
Setting up bsdextrautils (2.40.2-11) ...
Setting up login.defs (1:4.16.0-5) ...
Installing new version of config file /etc/login.defs ...
Setting up libbrotli1:arm64 (1.1.0-2+b6) ...
Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
No schema files found: doing nothing.
Setting up libdpkg-perl (1.22.12~1.gbp82cafd) ...
Setting up mount (2.40.2-11) ...
Setting up libsemanage2:arm64 (3.7-2+b1) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libmarkdown2:arm64 (2.2.7-2.1) ...
Setting up login (1:4.16.0-2+really2.40.2-11) ...
Setting up dpkg-dev (1.22.12~1.gbp82cafd) ...
Setting up passwd (1:4.16.0-5) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Local sources
-------------
/tmp/debusine-fetch-exec-upload-lnxrromf/libbio-db-gff-perl_1.7.4-1.dsc exists in /tmp/debusine-fetch-exec-upload-lnxrromf; copying to chroot
I: NOTICE: Log filtering will replace 'build/libbio-db-gff-perl-KBzIfH/libbio-db-gff-perl-1.7.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbio-db-gff-perl-KBzIfH' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl, libcgi-pm-perl, libtest-most-perl, libmodule-build-perl, build-essential, fakeroot, perl
Filtered Build-Depends: debhelper-compat (= 12), libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl, libcgi-pm-perl, libtest-most-perl, libmodule-build-perl, build-essential, fakeroot, perl
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [763 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [775 B]
Fetched 2147 B in 0s (190 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
apache2-bin autoconf automake autopoint autotools-dev build-essential cpp
cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
dh-autoreconf dh-strip-nondeterminism dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libalgorithm-diff-perl
libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3
libaprutil1-ldap libaprutil1t64 libasan8 libbio-db-biofetch-perl
libbio-perl-perl libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libcurl4t64
libdata-stag-perl libdbi-perl libdebhelper-perl libdevel-symdump-perl
libelf1t64 libexpat1 libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libhwasan0 libisl23 libitm1 liblsan0 liblua5.4-0
libmodule-build-perl libmpc3 libmpfr6 libstdc++-14-dev libsub-uplevel-perl
libtest-deep-perl libtest-differences-perl libtest-exception-perl
libtest-most-perl libtest-warn-perl libtext-diff-perl libtool libtsan2
libubsan1 linux-libc-dev m4 po-debconf rpcsvc-proto
Suggested packages:
apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc dh-make gcc-14-doc gcc-multilib manpages-dev flex bison gdb
gcc-doc gdb-aarch64-linux-gnu bioperl libxml-sax-expatxs-perl libc-devtools
glibc-doc libnet-daemon-perl libsql-statement-perl libstdc++-14-doc
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl
Recommended packages:
libalgorithm-diff-xs-perl libapache2-reload-perl libbsd-resource-perl
bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl
libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl
libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgd-perl
libgraph-perl libgraphviz-perl libhtml-tableextract-perl
liblist-moreutils-perl libpostscript-perl libset-scalar-perl
libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl
libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl
libxml-simple-perl libxml-twig-perl libxml-writer-perl manpages manpages-dev
perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl
libxml-perl libarchive-cpio-perl libmodule-signature-perl libpod-readme-perl
libsoftware-license-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
apache2-bin autoconf automake autopoint autotools-dev build-essential cpp
cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
dh-autoreconf dh-strip-nondeterminism dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libalgorithm-diff-perl
libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3
libaprutil1-ldap libaprutil1t64 libasan8 libbio-db-biofetch-perl
libbio-perl-perl libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libcurl4t64
libdata-stag-perl libdbi-perl libdebhelper-perl libdevel-symdump-perl
libelf1t64 libexpat1 libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libhwasan0 libisl23 libitm1 liblsan0 liblua5.4-0
libmodule-build-perl libmpc3 libmpfr6 libstdc++-14-dev libsub-uplevel-perl
libtest-deep-perl libtest-differences-perl libtest-exception-perl
libtest-most-perl libtest-warn-perl libtext-diff-perl libtool libtsan2
libubsan1 linux-libc-dev m4 po-debconf rpcsvc-proto
sbuild-build-depends-main-dummy
0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded.
Need to get 68.3 MB of archives.
After this operation, 271 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B]
Get:2 http://deb.debian.org/debian sid/main arm64 libapr1t64 arm64 1.7.5-1 [97.1 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 libaprutil1t64 arm64 1.6.3-3 [86.0 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libaprutil1-dbd-sqlite3 arm64 1.6.3-3 [14.0 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 libaprutil1-ldap arm64 1.6.3-3 [12.1 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 liblua5.4-0 arm64 5.4.6-3+b2 [133 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 apache2-bin arm64 2.4.62-3 [1287 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:25 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:26 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:27 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:36 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:38 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:39 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:41 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:43 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:44 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:45 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:50 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:51 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 libalgorithm-diff-perl all 1.201-1 [43.3 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 libdevel-symdump-perl all 2.18-5 [15.8 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 libapache2-mod-perl2 arm64 2.0.13-2+b1 [794 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libdbi-perl arm64 1.645-1+b1 [856 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 libapache-dbi-perl all 1.12-3 [48.5 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libdata-stag-perl all 0.14-3 [448 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 libbio-perl-perl all 1.7.8-1 [2603 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 libmodule-build-perl all 0.423400-2 [252 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 libsub-uplevel-perl all 0.2800-3 [14.0 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 libtest-deep-perl all 1.204-1 [52.9 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 libtext-diff-perl all 1.45-2 [27.2 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 libtest-differences-perl all 0.71-1 [17.9 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 libtest-exception-perl all 0.43-3 [16.9 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 libtest-warn-perl all 0.37-2 [14.5 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 libtest-most-perl all 0.38-1 [25.1 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 68.3 MB in 1s (91.7 MB/s)
Selecting previously unselected package libapr1t64:arm64.
(Reading database ... 17119 files and directories currently installed.)
Preparing to unpack .../00-libapr1t64_1.7.5-1_arm64.deb ...
Unpacking libapr1t64:arm64 (1.7.5-1) ...
Selecting previously unselected package libexpat1:arm64.
Preparing to unpack .../01-libexpat1_2.6.4-1_arm64.deb ...
Unpacking libexpat1:arm64 (2.6.4-1) ...
Selecting previously unselected package libaprutil1t64:arm64.
Preparing to unpack .../02-libaprutil1t64_1.6.3-3_arm64.deb ...
Unpacking libaprutil1t64:arm64 (1.6.3-3) ...
Selecting previously unselected package libaprutil1-dbd-sqlite3:arm64.
Preparing to unpack .../03-libaprutil1-dbd-sqlite3_1.6.3-3_arm64.deb ...
Unpacking libaprutil1-dbd-sqlite3:arm64 (1.6.3-3) ...
Selecting previously unselected package libaprutil1-ldap:arm64.
Preparing to unpack .../04-libaprutil1-ldap_1.6.3-3_arm64.deb ...
Unpacking libaprutil1-ldap:arm64 (1.6.3-3) ...
Selecting previously unselected package libcurl4t64:arm64.
Preparing to unpack .../05-libcurl4t64_8.11.0-1_arm64.deb ...
Unpacking libcurl4t64:arm64 (8.11.0-1) ...
Selecting previously unselected package liblua5.4-0:arm64.
Preparing to unpack .../06-liblua5.4-0_5.4.6-3+b2_arm64.deb ...
Unpacking liblua5.4-0:arm64 (5.4.6-3+b2) ...
Selecting previously unselected package apache2-bin.
Preparing to unpack .../07-apache2-bin_2.4.62-3_arm64.deb ...
Unpacking apache2-bin (2.4.62-3) ...
Selecting previously unselected package m4.
Preparing to unpack .../08-m4_1.4.19-4_arm64.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../09-autoconf_2.72-3_all.deb ...
Unpacking autoconf (2.72-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../10-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../11-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../12-autopoint_0.22.5-2_all.deb ...
Unpacking autopoint (0.22.5-2) ...
Selecting previously unselected package libc-dev-bin.
Preparing to unpack .../13-libc-dev-bin_2.40-3_arm64.deb ...
Unpacking libc-dev-bin (2.40-3) ...
Selecting previously unselected package linux-libc-dev.
Preparing to unpack .../14-linux-libc-dev_6.11.7-1_all.deb ...
Unpacking linux-libc-dev (6.11.7-1) ...
Selecting previously unselected package libcrypt-dev:arm64.
Preparing to unpack .../15-libcrypt-dev_1%3a4.4.36-5_arm64.deb ...
Unpacking libcrypt-dev:arm64 (1:4.4.36-5) ...
Selecting previously unselected package rpcsvc-proto.
Preparing to unpack .../16-rpcsvc-proto_1.4.3-1+b1_arm64.deb ...
Unpacking rpcsvc-proto (1.4.3-1+b1) ...
Selecting previously unselected package libc6-dev:arm64.
Preparing to unpack .../17-libc6-dev_2.40-3_arm64.deb ...
Unpacking libc6-dev:arm64 (2.40-3) ...
Selecting previously unselected package libisl23:arm64.
Preparing to unpack .../18-libisl23_0.27-1_arm64.deb ...
Unpacking libisl23:arm64 (0.27-1) ...
Selecting previously unselected package libmpfr6:arm64.
Preparing to unpack .../19-libmpfr6_4.2.1-1+b2_arm64.deb ...
Unpacking libmpfr6:arm64 (4.2.1-1+b2) ...
Selecting previously unselected package libmpc3:arm64.
Preparing to unpack .../20-libmpc3_1.3.1-1+b3_arm64.deb ...
Unpacking libmpc3:arm64 (1.3.1-1+b3) ...
Selecting previously unselected package cpp-14-aarch64-linux-gnu.
Preparing to unpack .../21-cpp-14-aarch64-linux-gnu_14.2.0-8_arm64.deb ...
Unpacking cpp-14-aarch64-linux-gnu (14.2.0-8) ...
Selecting previously unselected package cpp-14.
Preparing to unpack .../22-cpp-14_14.2.0-8_arm64.deb ...
Unpacking cpp-14 (14.2.0-8) ...
Selecting previously unselected package cpp-aarch64-linux-gnu.
Preparing to unpack .../23-cpp-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package cpp.
Preparing to unpack .../24-cpp_4%3a14.2.0-1_arm64.deb ...
Unpacking cpp (4:14.2.0-1) ...
Selecting previously unselected package libcc1-0:arm64.
Preparing to unpack .../25-libcc1-0_14.2.0-8_arm64.deb ...
Unpacking libcc1-0:arm64 (14.2.0-8) ...
Selecting previously unselected package libitm1:arm64.
Preparing to unpack .../26-libitm1_14.2.0-8_arm64.deb ...
Unpacking libitm1:arm64 (14.2.0-8) ...
Selecting previously unselected package libasan8:arm64.
Preparing to unpack .../27-libasan8_14.2.0-8_arm64.deb ...
Unpacking libasan8:arm64 (14.2.0-8) ...
Selecting previously unselected package liblsan0:arm64.
Preparing to unpack .../28-liblsan0_14.2.0-8_arm64.deb ...
Unpacking liblsan0:arm64 (14.2.0-8) ...
Selecting previously unselected package libtsan2:arm64.
Preparing to unpack .../29-libtsan2_14.2.0-8_arm64.deb ...
Unpacking libtsan2:arm64 (14.2.0-8) ...
Selecting previously unselected package libubsan1:arm64.
Preparing to unpack .../30-libubsan1_14.2.0-8_arm64.deb ...
Unpacking libubsan1:arm64 (14.2.0-8) ...
Selecting previously unselected package libhwasan0:arm64.
Preparing to unpack .../31-libhwasan0_14.2.0-8_arm64.deb ...
Unpacking libhwasan0:arm64 (14.2.0-8) ...
Selecting previously unselected package libgcc-14-dev:arm64.
Preparing to unpack .../32-libgcc-14-dev_14.2.0-8_arm64.deb ...
Unpacking libgcc-14-dev:arm64 (14.2.0-8) ...
Selecting previously unselected package gcc-14-aarch64-linux-gnu.
Preparing to unpack .../33-gcc-14-aarch64-linux-gnu_14.2.0-8_arm64.deb ...
Unpacking gcc-14-aarch64-linux-gnu (14.2.0-8) ...
Selecting previously unselected package gcc-14.
Preparing to unpack .../34-gcc-14_14.2.0-8_arm64.deb ...
Unpacking gcc-14 (14.2.0-8) ...
Selecting previously unselected package gcc-aarch64-linux-gnu.
Preparing to unpack .../35-gcc-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package gcc.
Preparing to unpack .../36-gcc_4%3a14.2.0-1_arm64.deb ...
Unpacking gcc (4:14.2.0-1) ...
Selecting previously unselected package libstdc++-14-dev:arm64.
Preparing to unpack .../37-libstdc++-14-dev_14.2.0-8_arm64.deb ...
Unpacking libstdc++-14-dev:arm64 (14.2.0-8) ...
Selecting previously unselected package g++-14-aarch64-linux-gnu.
Preparing to unpack .../38-g++-14-aarch64-linux-gnu_14.2.0-8_arm64.deb ...
Unpacking g++-14-aarch64-linux-gnu (14.2.0-8) ...
Selecting previously unselected package g++-14.
Preparing to unpack .../39-g++-14_14.2.0-8_arm64.deb ...
Unpacking g++-14 (14.2.0-8) ...
Selecting previously unselected package g++-aarch64-linux-gnu.
Preparing to unpack .../40-g++-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking g++-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package g++.
Preparing to unpack .../41-g++_4%3a14.2.0-1_arm64.deb ...
Unpacking g++ (4:14.2.0-1) ...
Selecting previously unselected package build-essential.
Preparing to unpack .../42-build-essential_12.12_arm64.deb ...
Unpacking build-essential (12.12) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../43-libdebhelper-perl_13.20_all.deb ...
Unpacking libdebhelper-perl (13.20) ...
Selecting previously unselected package libtool.
Preparing to unpack .../44-libtool_2.4.7-8_all.deb ...
Unpacking libtool (2.4.7-8) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../45-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../46-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../47-dh-strip-nondeterminism_1.14.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.14.0-1) ...
Selecting previously unselected package libelf1t64:arm64.
Preparing to unpack .../48-libelf1t64_0.192-4_arm64.deb ...
Unpacking libelf1t64:arm64 (0.192-4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../49-dwz_0.15-1+b1_arm64.deb ...
Unpacking dwz (0.15-1+b1) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../50-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../51-debhelper_13.20_all.deb ...
Unpacking debhelper (13.20) ...
Selecting previously unselected package libfakeroot:arm64.
Preparing to unpack .../52-libfakeroot_1.36-1_arm64.deb ...
Unpacking libfakeroot:arm64 (1.36-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../53-fakeroot_1.36-1_arm64.deb ...
Unpacking fakeroot (1.36-1) ...
Selecting previously unselected package libalgorithm-diff-perl.
Preparing to unpack .../54-libalgorithm-diff-perl_1.201-1_all.deb ...
Unpacking libalgorithm-diff-perl (1.201-1) ...
Selecting previously unselected package libdevel-symdump-perl.
Preparing to unpack .../55-libdevel-symdump-perl_2.18-5_all.deb ...
Unpacking libdevel-symdump-perl (2.18-5) ...
Selecting previously unselected package libapache2-mod-perl2.
Preparing to unpack .../56-libapache2-mod-perl2_2.0.13-2+b1_arm64.deb ...
Unpacking libapache2-mod-perl2 (2.0.13-2+b1) ...
Selecting previously unselected package libdbi-perl:arm64.
Preparing to unpack .../57-libdbi-perl_1.645-1+b1_arm64.deb ...
Unpacking libdbi-perl:arm64 (1.645-1+b1) ...
Selecting previously unselected package libapache-dbi-perl.
Preparing to unpack .../58-libapache-dbi-perl_1.12-3_all.deb ...
Unpacking libapache-dbi-perl (1.12-3) ...
Selecting previously unselected package libdata-stag-perl.
Preparing to unpack .../59-libdata-stag-perl_0.14-3_all.deb ...
Unpacking libdata-stag-perl (0.14-3) ...
Selecting previously unselected package libbio-perl-perl.
Preparing to unpack .../60-libbio-perl-perl_1.7.8-1_all.deb ...
Unpacking libbio-perl-perl (1.7.8-1) ...
Selecting previously unselected package libbio-db-biofetch-perl.
Preparing to unpack .../61-libbio-db-biofetch-perl_1.7.3-4_all.deb ...
Unpacking libbio-db-biofetch-perl (1.7.3-4) ...
Selecting previously unselected package libmodule-build-perl.
Preparing to unpack .../62-libmodule-build-perl_0.423400-2_all.deb ...
Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl'
Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl'
Unpacking libmodule-build-perl (0.423400-2) ...
Selecting previously unselected package libsub-uplevel-perl.
Preparing to unpack .../63-libsub-uplevel-perl_0.2800-3_all.deb ...
Unpacking libsub-uplevel-perl (0.2800-3) ...
Selecting previously unselected package libtest-deep-perl.
Preparing to unpack .../64-libtest-deep-perl_1.204-1_all.deb ...
Unpacking libtest-deep-perl (1.204-1) ...
Selecting previously unselected package libtext-diff-perl.
Preparing to unpack .../65-libtext-diff-perl_1.45-2_all.deb ...
Unpacking libtext-diff-perl (1.45-2) ...
Selecting previously unselected package libtest-differences-perl.
Preparing to unpack .../66-libtest-differences-perl_0.71-1_all.deb ...
Unpacking libtest-differences-perl (0.71-1) ...
Selecting previously unselected package libtest-exception-perl.
Preparing to unpack .../67-libtest-exception-perl_0.43-3_all.deb ...
Unpacking libtest-exception-perl (0.43-3) ...
Selecting previously unselected package libtest-warn-perl.
Preparing to unpack .../68-libtest-warn-perl_0.37-2_all.deb ...
Unpacking libtest-warn-perl (0.37-2) ...
Selecting previously unselected package libtest-most-perl.
Preparing to unpack .../69-libtest-most-perl_0.38-1_all.deb ...
Unpacking libtest-most-perl (0.38-1) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../70-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up libexpat1:arm64 (2.6.4-1) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libtest-deep-perl (1.204-1) ...
Setting up libcurl4t64:arm64 (8.11.0-1) ...
Setting up libalgorithm-diff-perl (1.201-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libdebhelper-perl (13.20) ...
Setting up linux-libc-dev (6.11.7-1) ...
Setting up m4 (1.4.19-4) ...
Setting up libfakeroot:arm64 (1.36-1) ...
Setting up libelf1t64:arm64 (0.192-4) ...
Setting up libmodule-build-perl (0.423400-2) ...
Setting up fakeroot (1.36-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Setting up autotools-dev (20220109.1) ...
Setting up rpcsvc-proto (1.4.3-1+b1) ...
Setting up libmpfr6:arm64 (4.2.1-1+b2) ...
Setting up libtext-diff-perl (1.45-2) ...
Setting up libmpc3:arm64 (1.3.1-1+b3) ...
Setting up autopoint (0.22.5-2) ...
Setting up autoconf (2.72-3) ...
Setting up libubsan1:arm64 (14.2.0-8) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up dwz (0.15-1+b1) ...
Setting up libdata-stag-perl (0.14-3) ...
Setting up libhwasan0:arm64 (14.2.0-8) ...
Setting up libcrypt-dev:arm64 (1:4.4.36-5) ...
Setting up libasan8:arm64 (14.2.0-8) ...
Setting up libapr1t64:arm64 (1.7.5-1) ...
Setting up libsub-uplevel-perl (0.2800-3) ...
Setting up liblua5.4-0:arm64 (5.4.6-3+b2) ...
Setting up libdevel-symdump-perl (2.18-5) ...
Setting up libbio-perl-perl (1.7.8-1) ...
Setting up libtsan2:arm64 (14.2.0-8) ...
Setting up libisl23:arm64 (0.27-1) ...
Setting up libc-dev-bin (2.40-3) ...
Setting up libcc1-0:arm64 (14.2.0-8) ...
Setting up libdbi-perl:arm64 (1.645-1+b1) ...
Setting up liblsan0:arm64 (14.2.0-8) ...
Setting up libitm1:arm64 (14.2.0-8) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libaprutil1t64:arm64 (1.6.3-3) ...
Setting up libtest-warn-perl (0.37-2) ...
Setting up libtest-differences-perl (0.71-1) ...
Setting up libaprutil1-ldap:arm64 (1.6.3-3) ...
Setting up libaprutil1-dbd-sqlite3:arm64 (1.6.3-3) ...
Setting up libtest-exception-perl (0.43-3) ...
Setting up libbio-db-biofetch-perl (1.7.3-4) ...
Setting up cpp-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libc6-dev:arm64 (2.40-3) ...
Setting up libgcc-14-dev:arm64 (14.2.0-8) ...
Setting up libstdc++-14-dev:arm64 (14.2.0-8) ...
Setting up libtest-most-perl (0.38-1) ...
Setting up apache2-bin (2.4.62-3) ...
Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libapache2-mod-perl2 (2.0.13-2+b1) ...
Setting up cpp-14 (14.2.0-8) ...
Setting up cpp (4:14.2.0-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up gcc-14 (14.2.0-8) ...
Setting up libapache-dbi-perl (1.12-3) ...
Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14 (14.2.0-8) ...
Setting up libtool (2.4.7-8) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up debhelper (13.20) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in all)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
Package versions: apache2-bin_2.4.62-3 appstream_1.0.3-1+b1 apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-aarch64-linux-gnu_14.2.0-8 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9+b1 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1+b1 diffutils_1:3.10-1+b1 dpkg_1.22.12~1.gbp82cafd dpkg-dev_1.22.12~1.gbp82cafd dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-aarch64-linux-gnu_14.2.0-8 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 gcc-14-aarch64-linux-gnu_14.2.0-8 gcc-14-base_14.2.0-8 gcc-aarch64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 gpg_2.2.45-2 gpgconf_2.2.45-2 gpgv_2.2.45-2 grep_3.11-4+b1 groff-base_1.23.0-5 gzip_1.12-1.1+b1 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 iso-codes_4.17.0-1 libacl1_2.3.2-2+b1 libalgorithm-diff-perl_1.201-1 libaliased-perl_0.34-3 libapache-dbi-perl_1.12-3 libapache2-mod-perl2_2.0.13-2+b1 libappstream5_1.0.3-1+b1 libapr1t64_1.7.5-1 libaprutil1-dbd-sqlite3_1.6.3-3 libaprutil1-ldap_1.6.3-3 libaprutil1t64_1.6.3-3 libapt-pkg-perl_0.1.40+b6 libapt-pkg6.0t64_2.9.11 libarchive-zip-perl_1.68-1 libasan8_14.2.0-8 libassuan9_3.0.1-2 libatomic1_14.2.0-8 libattr1_1:2.5.2-2 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2 libb-hooks-endofscope-perl_0.28-1 libb-hooks-op-check-perl_0.22-3+b2 libberkeleydb-perl_0.66-1 libbinutils_2.43.1-5 libbio-db-biofetch-perl_1.7.3-4 libbio-perl-perl_1.7.8-1 libblkid1_2.40.2-11 libbrotli1_1.1.0-2+b6 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libcap-ng0_0.8.5-3+b1 libcap2_1:2.66-5+b1 libcapture-tiny-perl_0.48-2 libcc1-0_14.2.0-8 libcgi-pm-perl_4.66-1 libclass-data-inheritable-perl_0.10-1 libclass-inspector-perl_1.36-3 libclass-method-modifiers-perl_2.15-1 libclass-xsaccessor-perl_1.19-4+b4 libclone-perl_0.47-1+b1 libcom-err2_1.47.1-1+b1 libconfig-tiny-perl_2.30-1 libconst-fast-perl_0.014-2 libcpanel-json-xs-perl_4.38-1+b1 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libcurl3t64-gnutls_8.11.0-1 libcurl4t64_8.11.0-1 libdata-dpath-perl_0.60-1 libdata-messagepack-perl_1.02-1+b4 libdata-optlist-perl_0.114-1 libdata-stag-perl_0.14-3 libdata-validate-domain-perl_0.15-1 libdata-validate-ip-perl_0.31-1 libdata-validate-uri-perl_0.07-3 libdb5.3t64_5.3.28+dfsg2-9 libdbi-perl_1.645-1+b1 libdebconfclient0_0.273 libdebhelper-perl_13.20 libdevel-callchecker-perl_0.009-1+b1 libdevel-size-perl_0.84-1+b1 libdevel-stacktrace-perl_2.0500-1 libdevel-symdump-perl_2.18-5 libdpkg-perl_1.22.12~1.gbp82cafd libdynaloader-functions-perl_0.004-1 libelf1t64_0.192-4 libemail-address-xs-perl_1.05-1+b4 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libexpat1_2.6.4-1 libext2fs2t64_1.47.1-1+b1 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-basedir-perl_0.09-2 libfile-find-rule-perl_0.34-3 libfile-listing-perl_6.16-1 libfile-sharedir-perl_1.118-3 libfile-stripnondeterminism-perl_1.14.0-1 libfont-ttf-perl_1.06-2 libgcc-14-dev_14.2.0-8 libgcc-s1_14.2.0-8 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libglib2.0-0t64_2.82.2-3 libgmp10_2:6.3.0+dfsg-2+b2 libgnutls30t64_3.8.8-2 libgomp1_14.2.0-8 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgssapi-krb5-2_1.21.3-3 libhogweed6t64_3.10-1+b1 libhtml-form-perl_6.12-1 libhtml-html5-entities-perl_0.004-3 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tokeparser-simple-perl_3.16-4 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_7.00-2 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-8 libicu72_72.1-5+b1 libidn2-0_2.3.7-2+b1 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-interactive-perl_1.025-1 libio-socket-ssl-perl_2.089-1 libio-string-perl_1.08-4 libipc-run3-perl_0.049-1 libipc-system-simple-perl_1.30-2 libisl23_0.27-1 libiterator-perl_0.03+ds1-2 libiterator-util-perl_0.02+ds1-2 libitm1_14.2.0-8 libjansson4_2.14-2+b3 libjson-maybexs-perl_1.004008-1 libk5crypto3_1.21.3-3 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-3 libkrb5support0_1.21.3-3 libldap-2.5-0_2.5.18+dfsg-3+b1 liblist-compare-perl_0.55-2 liblist-someutils-perl_0.59-1 liblist-utilsby-perl_0.12-2 liblsan0_14.2.0-8 liblua5.4-0_5.4.6-3+b2 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.14-1 liblz1_1.15~pre2-1 liblz4-1_1.9.4-3+b1 liblzma5_5.6.3-1+b1 liblzo2-2_2.10-3+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmarkdown2_2.2.7-2.1 libmd0_1.1.0-2+b1 libmldbm-perl_2.05-4 libmodule-build-perl_0.423400-2 libmodule-implementation-perl_0.09-2 libmodule-runtime-perl_0.016-2 libmoo-perl_2.005005-1 libmoox-aliases-perl_0.001006-2 libmount1_2.40.2-11 libmouse-perl_2.5.11-1+b1 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libnamespace-clean-perl_0.27-2 libnet-domain-tld-perl_1.75-4 libnet-http-perl_6.23-1 libnet-ipv6addr-perl_1.02-1 libnet-netmask-perl_2.0002-2 libnet-ssleay-perl_1.94-2 libnetaddr-ip-perl_4.079+dfsg-2+b4 libnettle8t64_3.10-1+b1 libnghttp2-14_1.64.0-1 libnghttp3-9_1.4.0-1+b1 libngtcp2-16_1.6.0-1 libngtcp2-crypto-gnutls8_1.6.0-1 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.5-2+b1 libpackage-stash-perl_0.40-1 libpam-modules_1.5.3-7+b1 libpam-modules-bin_1.5.3-7+b1 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7+b1 libparams-classify-perl_0.015-2+b4 libparams-util-perl_1.102-3+b1 libpath-tiny-perl_0.146-1 libpcre2-8-0_10.44-4 libperl5.40_5.40.0-7 libperlio-gzip-perl_0.20-1+b4 libperlio-utf8-strict-perl_0.010-1+b3 libpipeline1_1.5.8-1 libproc-processtable-perl_0.636-1+b3 libpsl5t64_0.21.2-1.1+b1 libreadline8t64_8.2-5 libregexp-wildcards-perl_1.05-3 librole-tiny-perl_2.002004-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b5 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b3 libselinux1_3.7-3+b1 libsemanage-common_3.7-2 libsemanage2_3.7-2+b1 libsepol2_3.7-1 libsereal-decoder-perl_5.004+ds-1+b3 libsereal-encoder-perl_5.004+ds-1+b3 libsframe1_2.43.1-5 libsmartcols1_2.40.2-11 libsort-versions-perl_1.62-3 libsqlite3-0_3.46.1-1 libss2_1.47.1-1+b1 libssh2-1t64_1.11.1-1 libssl3t64_3.3.2-2 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 libstemmer0d_2.2.0-4+b2 libstrictures-perl_2.000006-1 libsub-exporter-perl_0.990-1 libsub-exporter-progressive-perl_0.001013-3 libsub-identify-perl_0.14-3+b3 libsub-install-perl_0.929-1 libsub-name-perl_0.27-1+b3 libsub-quote-perl_2.006008-1 libsub-uplevel-perl_0.2800-3 libsyntax-keyword-try-perl_0.30-1+b1 libsystemd0_257~rc2-3 libtasn1-6_4.19.0-3+b3 libterm-readkey-perl_2.38-2+b4 libtest-deep-perl_1.204-1 libtest-differences-perl_0.71-1 libtest-exception-perl_0.43-3 libtest-most-perl_0.38-1 libtest-warn-perl_0.37-2 libtext-diff-perl_1.45-2 libtext-glob-perl_0.11-3 libtext-levenshteinxs-perl_0.03-5+b4 libtext-markdown-discount-perl_0.16-1+b3 libtext-xslate-perl_3.5.9-2+b1 libtime-duration-perl_1.21-2 libtime-moment-perl_0.44-2+b4 libtimedate-perl_2.3300-2 libtinfo6_6.5-2+b1 libtool_2.4.7-8 libtry-tiny-perl_0.32-1 libtsan2_14.2.0-8 libubsan1_14.2.0-8 libuchardet0_0.0.8-1+b2 libudev1_257~rc2-3 libunicode-utf8-perl_0.62-2+b3 libunistring5_1.2-1+b1 liburi-perl_5.30-1 libuuid1_2.40.2-11 libvariable-magic-perl_0.64-1+b1 libwww-mechanize-perl_2.19-1 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml2_2.12.7+dfsg+really2.9.14-0.2+b1 libxmlb2_0.3.21-1 libxs-parse-keyword-perl_0.46-1+b1 libxxhash0_0.8.2-2+b2 libyaml-0-2_0.2.5-1+b2 libyaml-libyaml-perl_0.902.0+ds-2+b1 libzstd1_1.5.6+dfsg-1+b1 lintian_2.120.0 linux-libc-dev_6.11.7-1 login_1:4.16.0-2+really2.40.2-11 login.defs_1:4.16.0-5 logsave_1.47.1-1+b1 lzop_1.04-2+b1 m4_1.4.19-4 make_4.3-4.1+b1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 mount_2.40.2-11 ncurses-base_6.5-2 ncurses-bin_6.5-2+b1 netbase_6.4 openssl_3.3.2-2 openssl-provider-legacy_3.3.2-2 passwd_1:4.16.0-5 patch_2.7.6-7+b1 patchutils_0.4.2-1+b1 perl_5.40.0-7 perl-base_5.40.0-7 perl-modules-5.40_5.40.0-7 perl-openssl-defaults_7+b2 plzip_1.11-2 po-debconf_1.0.21+nmu1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1+b1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2+b1 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4+b1 tar_1.35+dfsg-3+b1 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28+b1 util-linux_2.40.2-11 xz-utils_5.6.3-1+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: libbio-db-gff-perl
Binary: libbio-db-gff-perl
Architecture: all
Version: 1.7.4-1
Maintainer: Michael R. Crusoe <michael.crusoe@gmail.com>
Homepage: https://metacpan.org/release/Bio-DB-GFF
Standards-Version: 4.4.1
Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-gff-perl
Vcs-Git: https://salsa.debian.org/med-team/libbio-db-gdd.git
Testsuite: autopkgtest-pkg-perl
Build-Depends: debhelper-compat (= 12), libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl, libcgi-pm-perl, libtest-most-perl, libmodule-build-perl
Build-Depends-Indep: perl
Package-List:
libbio-db-gff-perl deb perl optional arch=all
Checksums-Sha1:
a8119d0f8d43e2380f89531a18a366e97dc10ef3 281469 libbio-db-gff-perl_1.7.4.orig.tar.gz
2b12f80c493209c5cade7ebb00c9533cdfef2011 1968 libbio-db-gff-perl_1.7.4-1.debian.tar.xz
Checksums-Sha256:
9becc9df6f6b7c5174aa0b818e7c6a0f2feb92aacf3ac2bd94071edc65b81267 281469 libbio-db-gff-perl_1.7.4.orig.tar.gz
9fa118d284e408097733127e7733f15fcefd19cb40f1297d43fdf3c435a8ffc4 1968 libbio-db-gff-perl_1.7.4-1.debian.tar.xz
Files:
f603ebc9a1d8574cdfc4812ef4b9abec 281469 libbio-db-gff-perl_1.7.4.orig.tar.gz
01ce0df5e07509f48b2834190764e98c 1968 libbio-db-gff-perl_1.7.4-1.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=POc0
-----END PGP SIGNATURE-----
gpgv: Signature made Mon Jan 13 15:19:19 2020 UTC
gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libbio-db-gff-perl_1.7.4-1.dsc: no acceptable signature found
dpkg-source: info: extracting libbio-db-gff-perl in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libbio-db-gff-perl_1.7.4.orig.tar.gz
dpkg-source: info: unpacking libbio-db-gff-perl_1.7.4-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package libbio-db-gff-perl
dpkg-buildpackage: info: source version 1.7.4-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <michael.crusoe@gmail.com>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
debian/rules clean
dh clean
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
/usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro"
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for Bio::DB::GFF
Writing MYMETA.yml and MYMETA.json
dh_auto_build
make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp lib/Bio/DB/GFF/Aggregator/transcript.pm blib/lib/Bio/DB/GFF/Aggregator/transcript.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_ensgene.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_ensgene.pm
cp lib/Bio/DB/GFF/Aggregator/match.pm blib/lib/Bio/DB/GFF/Aggregator/match.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/iterator.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/iterator.pm
cp lib/Bio/DB/GFF/Adaptor/memory/feature_serializer.pm blib/lib/Bio/DB/GFF/Adaptor/memory/feature_serializer.pm
cp lib/Bio/DB/GFF/Adaptor/memory/iterator.pm blib/lib/Bio/DB/GFF/Adaptor/memory/iterator.pm
cp lib/Bio/DB/GFF/Aggregator.pm blib/lib/Bio/DB/GFF/Aggregator.pm
cp lib/Bio/DB/GFF.pm blib/lib/Bio/DB/GFF.pm
cp lib/Bio/DB/GFF/Adaptor/memory.pm blib/lib/Bio/DB/GFF/Adaptor/memory.pm
cp lib/Bio/DB/GFF/Aggregator/gene.pm blib/lib/Bio/DB/GFF/Aggregator/gene.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/oracle.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/oracle.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/pg_fts.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/pg_fts.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm
cp lib/Bio/DB/GFF/Adaptor/biofetch.pm blib/lib/Bio/DB/GFF/Adaptor/biofetch.pm
cp lib/Bio/DB/GFF/Aggregator/alignment.pm blib/lib/Bio/DB/GFF/Aggregator/alignment.pm
cp lib/Bio/DB/GFF/Aggregator/none.pm blib/lib/Bio/DB/GFF/Aggregator/none.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/pg.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/pg.pm
cp lib/Bio/DB/GFF/Adaptor/biofetch_oracle.pm blib/lib/Bio/DB/GFF/Adaptor/biofetch_oracle.pm
cp lib/Bio/DB/GFF/Aggregator/clone.pm blib/lib/Bio/DB/GFF/Aggregator/clone.pm
cp lib/Bio/DB/GFF/Adaptor/berkeleydb.pm blib/lib/Bio/DB/GFF/Adaptor/berkeleydb.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_acembly.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_acembly.pm
cp lib/Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm blib/lib/Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm
cp lib/Bio/DB/GFF/Aggregator/so_transcript.pm blib/lib/Bio/DB/GFF/Aggregator/so_transcript.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm
cp lib/Bio/DB/GFF/Adaptor/dbi.pm blib/lib/Bio/DB/GFF/Adaptor/dbi.pm
cp lib/Bio/DB/GFF/Adaptor/dbi/mysql.pm blib/lib/Bio/DB/GFF/Adaptor/dbi/mysql.pm
cp lib/Bio/DB/GFF/Aggregator/orf.pm blib/lib/Bio/DB/GFF/Aggregator/orf.pm
cp lib/Bio/DB/GFF/Aggregator/coding.pm blib/lib/Bio/DB/GFF/Aggregator/coding.pm
cp lib/Bio/DB/GFF/Aggregator/processed_transcript.pm blib/lib/Bio/DB/GFF/Aggregator/processed_transcript.pm
cp lib/Bio/DB/GFF/Featname.pm blib/lib/Bio/DB/GFF/Featname.pm
cp lib/Bio/DB/GFF/Feature.pm blib/lib/Bio/DB/GFF/Feature.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_softberry.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_softberry.pm
cp lib/Bio/DB/GFF/RelSegment.pm blib/lib/Bio/DB/GFF/RelSegment.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_twinscan.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_twinscan.pm
cp lib/Bio/DB/GFF/Segment.pm blib/lib/Bio/DB/GFF/Segment.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_sanger22pseudo.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_sanger22pseudo.pm
cp lib/Bio/DB/GFF/Homol.pm blib/lib/Bio/DB/GFF/Homol.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_genscan.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_genscan.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_sanger22.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_sanger22.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_unigene.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_unigene.pm
cp lib/Bio/DB/GFF/Typename.pm blib/lib/Bio/DB/GFF/Typename.pm
cp lib/Bio/DB/GFF/Aggregator/ucsc_refgene.pm blib/lib/Bio/DB/GFF/Aggregator/ucsc_refgene.pm
cp bin/bp_bulk_load_gff blib/script/bp_bulk_load_gff
cp bin/bp_das_server blib/script/bp_das_server
cp bin/bp_fast_load_gff blib/script/bp_fast_load_gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_bulk_load_gff
cp bin/bp_genbank2gff blib/script/bp_genbank2gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_fast_load_gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_das_server
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_genbank2gff
cp bin/bp_generate_histogram blib/script/bp_generate_histogram
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_generate_histogram
cp bin/bp_load_gff blib/script/bp_load_gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_load_gff
cp bin/bp_meta_gff blib/script/bp_meta_gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_meta_gff
Manifying 6 pod documents
Manifying 27 pod documents
Manifying 16 pod documents
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test
make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t .........
1..50
ok 1 - Bio/DB/GFF.pm loaded ok
ok 2 - Bio/DB/GFF/Adaptor/berkeleydb.pm loaded ok
ok 3 - Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm loaded ok
ok 4 - Bio/DB/GFF/Adaptor/biofetch.pm loaded ok
ok 5 - Bio/DB/GFF/Adaptor/biofetch_oracle.pm loaded ok
ok 6 - Bio/DB/GFF/Adaptor/dbi.pm loaded ok
ok 7 - Bio/DB/GFF/Adaptor/dbi/caching_handle.pm loaded ok
ok 8 - Bio/DB/GFF/Adaptor/dbi/iterator.pm loaded ok
ok 9 - Bio/DB/GFF/Adaptor/dbi/mysql.pm loaded ok
ok 10 - Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm loaded ok
ok 11 - Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm loaded ok
ok 12 - Bio/DB/GFF/Adaptor/dbi/oracle.pm loaded ok
ok 13 - Bio/DB/GFF/Adaptor/dbi/pg.pm loaded ok
ok 14 - Bio/DB/GFF/Adaptor/dbi/pg_fts.pm loaded ok
ok 15 - Bio/DB/GFF/Adaptor/memory.pm loaded ok
ok 16 - Bio/DB/GFF/Adaptor/memory/feature_serializer.pm loaded ok
ok 17 - Bio/DB/GFF/Adaptor/memory/iterator.pm loaded ok
ok 18 - Bio/DB/GFF/Aggregator.pm loaded ok
ok 19 - Bio/DB/GFF/Aggregator/alignment.pm loaded ok
ok 20 - Bio/DB/GFF/Aggregator/clone.pm loaded ok
ok 21 - Bio/DB/GFF/Aggregator/coding.pm loaded ok
ok 22 - Bio/DB/GFF/Aggregator/gene.pm loaded ok
ok 23 - Bio/DB/GFF/Aggregator/match.pm loaded ok
ok 24 - Bio/DB/GFF/Aggregator/none.pm loaded ok
ok 25 - Bio/DB/GFF/Aggregator/orf.pm loaded ok
ok 26 - Bio/DB/GFF/Aggregator/processed_transcript.pm loaded ok
ok 27 - Bio/DB/GFF/Aggregator/so_transcript.pm loaded ok
ok 28 - Bio/DB/GFF/Aggregator/transcript.pm loaded ok
ok 29 - Bio/DB/GFF/Aggregator/ucsc_acembly.pm loaded ok
ok 30 - Bio/DB/GFF/Aggregator/ucsc_ensgene.pm loaded ok
ok 31 - Bio/DB/GFF/Aggregator/ucsc_genscan.pm loaded ok
ok 32 - Bio/DB/GFF/Aggregator/ucsc_refgene.pm loaded ok
ok 33 - Bio/DB/GFF/Aggregator/ucsc_sanger22.pm loaded ok
ok 34 - Bio/DB/GFF/Aggregator/ucsc_sanger22pseudo.pm loaded ok
ok 35 - Bio/DB/GFF/Aggregator/ucsc_softberry.pm loaded ok
ok 36 - Bio/DB/GFF/Aggregator/ucsc_twinscan.pm loaded ok
ok 37 - Bio/DB/GFF/Aggregator/ucsc_unigene.pm loaded ok
ok 38 - Bio/DB/GFF/Featname.pm loaded ok
ok 39 - Bio/DB/GFF/Feature.pm loaded ok
ok 40 - Bio/DB/GFF/Homol.pm loaded ok
ok 41 - Bio/DB/GFF/RelSegment.pm loaded ok
ok 42 - Bio/DB/GFF/Segment.pm loaded ok
ok 43 - Bio/DB/GFF/Typename.pm loaded ok
ok 44 - bin/bp_bulk_load_gff compiled ok
ok 45 - bin/bp_das_server compiled ok
ok 46 - bin/bp_fast_load_gff compiled ok
ok 47 - bin/bp_genbank2gff compiled ok
ok 48 - bin/bp_generate_histogram compiled ok
ok 49 - bin/bp_load_gff compiled ok
ok 50 - bin/bp_meta_gff compiled ok
ok
t/author-mojibake.t .... skipped: these tests are for testing by the author
t/author-pod-syntax.t .. skipped: these tests are for testing by the author
You are loading a Bio::DB::GFF database with GFF3 formatted data.
While this will likely work fine, the Bio::DB::GFF schema does not
always faithfully capture the complexity represented in GFF3 files.
Unless you have a specific reason for using Bio::DB::GFF, we suggest
that you use a Bio::DB::SeqFeature::Store database and its corresponding
loader, bp_seqfeature_load.pl.
t/BioDBGFF.t ...........
1..275
ok 1 - use Bio::DB::GFF;
ok 2
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok 33
ok 34
ok 35
ok 36
ok 37
ok 38
ok 39
ok 40
ok 41
ok 42
ok 43
ok 44
ok 45
ok 46
ok 47
ok 48
ok 49
ok 50
ok 51
ok 52
ok 53
ok 54
ok 55
ok 56
ok 57
ok 58
ok 59
ok 60
ok 61
ok 62
ok 63
ok 64
ok 65
ok 66
ok 67
ok 68
ok 69
ok 70
ok 71
ok 72
ok 73
ok 74
ok 75
ok 76
ok 77
ok 78
ok 79
ok 80
ok 81
ok 82
ok 83
ok 84
ok 85
ok 86
ok 87
ok 88
ok 89
ok 90
ok 91
ok 92
ok 93
ok 94
ok 95
ok 96
ok 97
ok 98
ok 99
ok 100
ok 101 # skip fetch_feature_by_gid() not implemented by this adaptor
ok 102 # skip fetch_feature_by_gid() not implemented by this adaptor
ok 103
ok 104
ok 105
ok 106
ok 107
ok 108
ok 109
ok 110
ok 111
ok 112
ok 113
ok 114
ok 115
ok 116
ok 117
ok 118
ok 119
ok 120
ok 121
ok 122
ok 123
ok 124
ok 125
ok 126
ok 127
ok 128
ok 129
ok 130
ok 131
ok 132 # skip delete_groups() not implemented by this adaptor
ok 133 # skip delete_groups() not implemented by this adaptor
ok 134
ok 135
ok 136
ok 137
ok 138
ok 139
ok 140
ok 141
ok 142
ok 143
ok 144
ok 145
ok 146
ok 147
ok 148
ok 149
ok 150
ok 151
ok 152
ok 153
ok 154
ok 155
ok 156
ok 157
ok 158
ok 159
ok 160
ok 161
ok 162
ok 163
ok 164
ok 165
ok 166
ok 167
ok 168
ok 169
ok 170
ok 171
ok 172
ok 173
ok 174
ok 175
ok 176
ok 177
ok 178
ok 179
ok 180
ok 181
ok 182
ok 183
ok 184
ok 185
ok 186
ok 187
ok 188
ok 189
ok 190
ok 191
ok 192
ok 193
ok 194
ok 195
ok 196
ok 197
ok 198
ok 199
ok 200
ok 201
ok 202
ok 203
ok 204
ok 205
ok 206
ok 207
ok 208
ok 209
ok 210
ok 211
ok 212
ok 213
ok 214
ok 215
ok 216
ok 217
ok 218
ok 219
ok 220
ok 221
ok 222
ok 223
ok 224
ok 225
ok 226
ok 227
ok 228
ok 229
ok 230
ok 231
ok 232
ok 233
ok 234
ok 235
ok 236
ok 237
ok 238 # skip fetch_feature_by_gid() not implemented by this adaptor
ok 239 # skip fetch_feature_by_gid() not implemented by this adaptor
ok 240
ok 241
ok 242
ok 243
ok 244
ok 245
ok 246 # skip preferred groups are not supported by gff3
ok 247 # skip preferred groups are not supported by gff3
ok 248 # skip preferred groups are not supported by gff3
ok 249
ok 250
ok 251
ok 252
ok 253
ok 254
ok 255
ok 256
ok 257
ok 258
ok 259
ok 260
ok 261
ok 262
ok 263
ok 264
ok 265
ok 266
ok 267
ok 268
ok 269 # skip delete_groups() not implemented by this adaptor
ok 270 # skip delete_groups() not implemented by this adaptor
ok 271
ok 272
ok 273
ok 274
ok 275
ok
All tests successful.
Files=4, Tests=325, 6 wallclock secs ( 0.06 usr 0.01 sys + 4.98 cusr 0.80 csys = 5.85 CPU)
Result: PASS
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep
dh_auto_install --destdir=debian/libbio-db-gff-perl/
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/libbio-db-gff-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Manifying 6 pod documents
Manifying 27 pod documents
Manifying 16 pod documents
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Homol.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Segment.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Feature.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/RelSegment.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Typename.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Featname.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/memory.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/berkeleydb.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/biofetch_oracle.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/biofetch.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/pg_fts.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/oracle.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysql.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/pg.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/iterator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/memory/feature_serializer.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Adaptor/memory/iterator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/so_transcript.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/coding.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_twinscan.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/transcript.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/gene.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/processed_transcript.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_acembly.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_genscan.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_sanger22pseudo.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/match.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_softberry.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_ensgene.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_unigene.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_refgene.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/clone.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_sanger22.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/alignment.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/orf.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/perl5/Bio/DB/GFF/Aggregator/none.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_generate_histogram.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_meta_gff.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_fast_load_gff.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_genbank2gff.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_bulk_load_gff.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man1/bp_load_gff.1p
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::alignment.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::berkeleydb::iterator.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::biofetch.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_twinscan.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::match.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::gene.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::iterator.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::transcript.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_genscan.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_sanger22pseudo.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysqlcmap.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Homol.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::memory.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_refgene.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_acembly.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::pg.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::orf.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::memory::iterator.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::caching_handle.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysqlopt.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Typename.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::oracle.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::none.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Segment.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysql.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_unigene.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::berkeleydb.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Featname.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_ensgene.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::so_transcript.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::biofetch_oracle.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::RelSegment.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::pg_fts.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::coding.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_sanger22.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Adaptor::memory::feature_serializer.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_softberry.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::clone.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Feature.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/share/man/man3/Bio::DB::GFF::Aggregator::processed_transcript.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_genbank2gff
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_bulk_load_gff
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_das_server
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_meta_gff
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_load_gff
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_generate_histogram
Installing /<<PKGBUILDDIR>>/debian/libbio-db-gff-perl/usr/bin/bp_fast_load_gff
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs
dh_installchangelogs
dh_installman
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libbio-db-gff-perl' in '../libbio-db-gff-perl_1.7.4-1_all.deb'.
dpkg-genbuildinfo --build=binary -O../libbio-db-gff-perl_1.7.4-1_arm64.buildinfo
dpkg-genchanges --build=binary -O../libbio-db-gff-perl_1.7.4-1_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-16T21:54:50Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libbio-db-gff-perl_1.7.4-1_arm64.changes:
-----------------------------------------
Format: 1.8
Date: Mon, 13 Jan 2020 13:16:18 +0100
Source: libbio-db-gff-perl
Binary: libbio-db-gff-perl
Architecture: all
Version: 1.7.4-1
Distribution: sid
Urgency: medium
Maintainer: Michael R. Crusoe <michael.crusoe@gmail.com>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
libbio-db-gff-perl - Storage and retrieval of sequence annotation data
Changes:
libbio-db-gff-perl (1.7.4-1) unstable; urgency=medium
.
* New upstream version
* Standards-Version: 4.4.1
Checksums-Sha1:
fb07593d02c31117fc48e5e3fc444a7af8368e69 261204 libbio-db-gff-perl_1.7.4-1_all.deb
4d8b421a8593b2cdfdf0692c1113b3dff89ff3c5 7090 libbio-db-gff-perl_1.7.4-1_arm64.buildinfo
Checksums-Sha256:
63d0f9ac4f1437bbaa33442fdf03c2ee644f7dd5486159d4324363a804021ccc 261204 libbio-db-gff-perl_1.7.4-1_all.deb
107463dbb1e7066c7b9d8f0b54518f37c2a9eb37114c3b3c101d67219d134a2b 7090 libbio-db-gff-perl_1.7.4-1_arm64.buildinfo
Files:
6765c954d5fdad969ac00fd02e29b0d7 261204 perl optional libbio-db-gff-perl_1.7.4-1_all.deb
cc83d37b6614987f1b3d5961fed76da6 7090 perl optional libbio-db-gff-perl_1.7.4-1_arm64.buildinfo
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: libbio-db-gff-perl
Binary: libbio-db-gff-perl
Architecture: all
Version: 1.7.4-1
Checksums-Md5:
6765c954d5fdad969ac00fd02e29b0d7 261204 libbio-db-gff-perl_1.7.4-1_all.deb
Checksums-Sha1:
fb07593d02c31117fc48e5e3fc444a7af8368e69 261204 libbio-db-gff-perl_1.7.4-1_all.deb
Checksums-Sha256:
63d0f9ac4f1437bbaa33442fdf03c2ee644f7dd5486159d4324363a804021ccc 261204 libbio-db-gff-perl_1.7.4-1_all.deb
Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Sat, 16 Nov 2024 21:54:50 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
apache2-bin (= 2.4.62-3),
autoconf (= 2.72-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.22.5-2),
autotools-dev (= 20220109.1),
base-files (= 13.5),
base-passwd (= 3.6.5),
bash (= 5.2.32-1+b2),
binutils (= 2.43.1-5),
binutils-aarch64-linux-gnu (= 2.43.1-5),
binutils-common (= 2.43.1-5),
bsdextrautils (= 2.40.2-11),
bsdutils (= 1:2.40.2-11),
build-essential (= 12.12),
bzip2 (= 1.0.8-6),
ca-certificates (= 20240203),
coreutils (= 9.5-1+b1),
cpp (= 4:14.2.0-1),
cpp-14 (= 14.2.0-8),
cpp-14-aarch64-linux-gnu (= 14.2.0-8),
cpp-aarch64-linux-gnu (= 4:14.2.0-1),
dash (= 0.5.12-9+b1),
debconf (= 1.5.87),
debhelper (= 13.20),
debianutils (= 5.21),
dh-autoreconf (= 20),
dh-strip-nondeterminism (= 1.14.0-1),
diffutils (= 1:3.10-1+b1),
dpkg (= 1.22.12~1.gbp82cafd),
dpkg-dev (= 1.22.12~1.gbp82cafd),
dwz (= 0.15-1+b1),
file (= 1:5.45-3+b1),
findutils (= 4.10.0-3),
g++ (= 4:14.2.0-1),
g++-14 (= 14.2.0-8),
g++-14-aarch64-linux-gnu (= 14.2.0-8),
g++-aarch64-linux-gnu (= 4:14.2.0-1),
gcc (= 4:14.2.0-1),
gcc-14 (= 14.2.0-8),
gcc-14-aarch64-linux-gnu (= 14.2.0-8),
gcc-14-base (= 14.2.0-8),
gcc-aarch64-linux-gnu (= 4:14.2.0-1),
gettext (= 0.22.5-2),
gettext-base (= 0.22.5-2),
grep (= 3.11-4+b1),
groff-base (= 1.23.0-5),
gzip (= 1.12-1.1+b1),
hostname (= 3.25),
init-system-helpers (= 1.67),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.2-2+b1),
libalgorithm-diff-perl (= 1.201-1),
libapache-dbi-perl (= 1.12-3),
libapache2-mod-perl2 (= 2.0.13-2+b1),
libapr1t64 (= 1.7.5-1),
libaprutil1-dbd-sqlite3 (= 1.6.3-3),
libaprutil1-ldap (= 1.6.3-3),
libaprutil1t64 (= 1.6.3-3),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 14.2.0-8),
libatomic1 (= 14.2.0-8),
libattr1 (= 1:2.5.2-2),
libaudit-common (= 1:4.0.2-2),
libaudit1 (= 1:4.0.2-2),
libbinutils (= 2.43.1-5),
libbio-db-biofetch-perl (= 1.7.3-4),
libbio-perl-perl (= 1.7.8-1),
libblkid1 (= 2.40.2-11),
libbrotli1 (= 1.1.0-2+b6),
libbz2-1.0 (= 1.0.8-6),
libc-bin (= 2.40-3),
libc-dev-bin (= 2.40-3),
libc6 (= 2.40-3),
libc6-dev (= 2.40-3),
libcap-ng0 (= 0.8.5-3+b1),
libcap2 (= 1:2.66-5+b1),
libcapture-tiny-perl (= 0.48-2),
libcc1-0 (= 14.2.0-8),
libcgi-pm-perl (= 4.66-1),
libclass-data-inheritable-perl (= 0.10-1),
libclone-perl (= 0.47-1+b1),
libcom-err2 (= 1.47.1-1+b1),
libcrypt-dev (= 1:4.4.36-5),
libcrypt1 (= 1:4.4.36-5),
libctf-nobfd0 (= 2.43.1-5),
libctf0 (= 2.43.1-5),
libcurl4t64 (= 8.11.0-1),
libdata-stag-perl (= 0.14-3),
libdb5.3t64 (= 5.3.28+dfsg2-9),
libdbi-perl (= 1.645-1+b1),
libdebconfclient0 (= 0.273),
libdebhelper-perl (= 13.20),
libdevel-stacktrace-perl (= 2.0500-1),
libdevel-symdump-perl (= 2.18-5),
libdpkg-perl (= 1.22.12~1.gbp82cafd),
libelf1t64 (= 0.192-4),
libencode-locale-perl (= 1.05-3),
libexception-class-perl (= 1.45-1),
libexpat1 (= 2.6.4-1),
libffi8 (= 3.4.6-1),
libfile-listing-perl (= 6.16-1),
libfile-stripnondeterminism-perl (= 1.14.0-1),
libgcc-14-dev (= 14.2.0-8),
libgcc-s1 (= 14.2.0-8),
libgdbm-compat4t64 (= 1.24-2),
libgdbm6t64 (= 1.24-2),
libgmp10 (= 2:6.3.0+dfsg-2+b2),
libgnutls30t64 (= 3.8.8-2),
libgomp1 (= 14.2.0-8),
libgprofng0 (= 2.43.1-5),
libgssapi-krb5-2 (= 1.21.3-3),
libhogweed6t64 (= 3.10-1+b1),
libhtml-parser-perl (= 3.83-1+b1),
libhtml-tagset-perl (= 3.24-1),
libhtml-tree-perl (= 5.07-3),
libhttp-cookies-perl (= 6.11-1),
libhttp-date-perl (= 6.06-1),
libhttp-message-perl (= 7.00-2),
libhttp-negotiate-perl (= 6.01-2),
libhwasan0 (= 14.2.0-8),
libicu72 (= 72.1-5+b1),
libidn2-0 (= 2.3.7-2+b1),
libio-html-perl (= 1.004-3),
libio-socket-ssl-perl (= 2.089-1),
libio-string-perl (= 1.08-4),
libisl23 (= 0.27-1),
libitm1 (= 14.2.0-8),
libjansson4 (= 2.14-2+b3),
libk5crypto3 (= 1.21.3-3),
libkeyutils1 (= 1.6.3-4),
libkrb5-3 (= 1.21.3-3),
libkrb5support0 (= 1.21.3-3),
libldap-2.5-0 (= 2.5.18+dfsg-3+b1),
liblsan0 (= 14.2.0-8),
liblua5.4-0 (= 5.4.6-3+b2),
liblwp-mediatypes-perl (= 6.04-2),
liblwp-protocol-https-perl (= 6.14-1),
liblzma5 (= 5.6.3-1+b1),
libmagic-mgc (= 1:5.45-3+b1),
libmagic1t64 (= 1:5.45-3+b1),
libmd0 (= 1.1.0-2+b1),
libmodule-build-perl (= 0.423400-2),
libmount1 (= 2.40.2-11),
libmpc3 (= 1.3.1-1+b3),
libmpfr6 (= 4.2.1-1+b2),
libnet-http-perl (= 6.23-1),
libnet-ssleay-perl (= 1.94-2),
libnettle8t64 (= 3.10-1+b1),
libnghttp2-14 (= 1.64.0-1),
libp11-kit0 (= 0.25.5-2+b1),
libpam-modules (= 1.5.3-7+b1),
libpam-modules-bin (= 1.5.3-7+b1),
libpam-runtime (= 1.5.3-7),
libpam0g (= 1.5.3-7+b1),
libpcre2-8-0 (= 10.44-4),
libperl5.40 (= 5.40.0-7),
libpipeline1 (= 1.5.8-1),
libpsl5t64 (= 0.21.2-1.1+b1),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5),
libsasl2-2 (= 2.1.28+dfsg1-8),
libsasl2-modules-db (= 2.1.28+dfsg1-8),
libseccomp2 (= 2.5.5-1+b3),
libselinux1 (= 3.7-3+b1),
libsframe1 (= 2.43.1-5),
libsmartcols1 (= 2.40.2-11),
libsqlite3-0 (= 3.46.1-1),
libssh2-1t64 (= 1.11.1-1),
libssl3t64 (= 3.3.2-2),
libstdc++-14-dev (= 14.2.0-8),
libstdc++6 (= 14.2.0-8),
libsub-uplevel-perl (= 0.2800-3),
libsystemd0 (= 257~rc2-3),
libtasn1-6 (= 4.19.0-3+b3),
libtest-deep-perl (= 1.204-1),
libtest-differences-perl (= 0.71-1),
libtest-exception-perl (= 0.43-3),
libtest-most-perl (= 0.38-1),
libtest-warn-perl (= 0.37-2),
libtext-diff-perl (= 1.45-2),
libtimedate-perl (= 2.3300-2),
libtinfo6 (= 6.5-2+b1),
libtool (= 2.4.7-8),
libtry-tiny-perl (= 0.32-1),
libtsan2 (= 14.2.0-8),
libubsan1 (= 14.2.0-8),
libuchardet0 (= 0.0.8-1+b2),
libudev1 (= 257~rc2-3),
libunistring5 (= 1.2-1+b1),
liburi-perl (= 5.30-1),
libuuid1 (= 2.40.2-11),
libwww-perl (= 6.77-1),
libwww-robotrules-perl (= 6.02-1),
libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1),
libzstd1 (= 1.5.6+dfsg-1+b1),
linux-libc-dev (= 6.11.7-1),
m4 (= 1.4.19-4),
make (= 4.3-4.1+b1),
man-db (= 2.13.0-1),
mawk (= 1.3.4.20240905-1),
ncurses-base (= 6.5-2),
ncurses-bin (= 6.5-2+b1),
netbase (= 6.4),
openssl (= 3.3.2-2),
openssl-provider-legacy (= 3.3.2-2),
patch (= 2.7.6-7+b1),
perl (= 5.40.0-7),
perl-base (= 5.40.0-7),
perl-modules-5.40 (= 5.40.0-7),
perl-openssl-defaults (= 7+b2),
po-debconf (= 1.0.21+nmu1),
rpcsvc-proto (= 1.4.3-1+b1),
sed (= 4.9-2+b1),
sensible-utils (= 0.0.24),
sysvinit-utils (= 3.11-1),
tar (= 1.35+dfsg-3+b1),
util-linux (= 2.40.2-11),
xz-utils (= 5.6.3-1+b1),
zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_US.UTF-8"
LC_ALL="C.UTF-8"
SOURCE_DATE_EPOCH="1578917778"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libbio-db-gff-perl_1.7.4-1_all.deb
----------------------------------
new Debian package, version 2.0.
size 261204 bytes: control archive=3532 bytes.
1283 bytes, 35 lines control
8721 bytes, 102 lines md5sums
Package: libbio-db-gff-perl
Version: 1.7.4-1
Architecture: all
Maintainer: Michael R. Crusoe <michael.crusoe@gmail.com>
Installed-Size: 842
Depends: perl:any, libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl, libcgi-pm-perl
Breaks: libbio-perl-perl (<< 1.7.3)
Replaces: libbio-perl-perl (<< 1.7.3)
Section: perl
Priority: optional
Homepage: https://metacpan.org/release/Bio-DB-GFF
Description: Storage and retrieval of sequence annotation data
Bio::DB::GFF provides fast indexed access to a sequence annotation database.
It supports multiple database types (ACeDB, relational), and multiple schemas
through a system of adaptors and aggregators.
.
The following operations are supported by this module:
.
- retrieving a segment of sequence based on the ID of a landmark
.
- retrieving the DNA from that segment
.
- finding all annotations that overlap with the segment
.
- finding all annotations that are completely contained within the
segment
.
- retrieving all annotations of a particular type, either within a
segment, or globally
.
- conversion from absolute to relative coordinates and back again,
using any arbitrary landmark for the relative coordinates
.
- using a sequence segment to create new segments based on relative
offsets
drwxr-xr-x root/root 0 2020-01-13 12:16 ./
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/bin/
-rwxr-xr-x root/root 20998 2020-01-13 12:16 ./usr/bin/bp_bulk_load_gff
-rwxr-xr-x root/root 14904 2020-01-13 12:16 ./usr/bin/bp_das_server
-rwxr-xr-x root/root 15702 2020-01-13 12:16 ./usr/bin/bp_fast_load_gff
-rwxr-xr-x root/root 10434 2020-01-13 12:16 ./usr/bin/bp_genbank2gff
-rwxr-xr-x root/root 3659 2020-01-13 12:16 ./usr/bin/bp_generate_histogram
-rwxr-xr-x root/root 6174 2020-01-13 12:16 ./usr/bin/bp_load_gff
-rwxr-xr-x root/root 2230 2020-01-13 12:16 ./usr/bin/bp_meta_gff
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/doc/libbio-db-gff-perl/
-rw-r--r-- root/root 309 2020-01-13 12:16 ./usr/share/doc/libbio-db-gff-perl/changelog.Debian.gz
-rw-r--r-- root/root 278 2020-01-08 20:41 ./usr/share/doc/libbio-db-gff-perl/changelog.gz
-rw-r--r-- root/root 1137 2020-01-13 12:16 ./usr/share/doc/libbio-db-gff-perl/copyright
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/man/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/man/man1/
-rw-r--r-- root/root 2726 2020-01-13 12:16 ./usr/share/man/man1/bp_bulk_load_gff.1p.gz
-rw-r--r-- root/root 2650 2020-01-13 12:16 ./usr/share/man/man1/bp_fast_load_gff.1p.gz
-rw-r--r-- root/root 1929 2020-01-13 12:16 ./usr/share/man/man1/bp_genbank2gff.1p.gz
-rw-r--r-- root/root 1445 2020-01-13 12:16 ./usr/share/man/man1/bp_generate_histogram.1p.gz
-rw-r--r-- root/root 2409 2020-01-13 12:16 ./usr/share/man/man1/bp_load_gff.1p.gz
-rw-r--r-- root/root 1503 2020-01-13 12:16 ./usr/share/man/man1/bp_meta_gff.1p.gz
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/man/man3/
-rw-r--r-- root/root 24438 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF.3pm.gz
-rw-r--r-- root/root 3005 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::berkeleydb.3pm.gz
-rw-r--r-- root/root 1230 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::berkeleydb::iterator.3pm.gz
-rw-r--r-- root/root 1968 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::biofetch.3pm.gz
-rw-r--r-- root/root 1979 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::biofetch_oracle.3pm.gz
-rw-r--r-- root/root 9351 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi.3pm.gz
-rw-r--r-- root/root 2192 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::caching_handle.3pm.gz
-rw-r--r-- root/root 1222 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::iterator.3pm.gz
-rw-r--r-- root/root 4496 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysql.3pm.gz
-rw-r--r-- root/root 4849 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysqlcmap.3pm.gz
-rw-r--r-- root/root 1086 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::mysqlopt.3pm.gz
-rw-r--r-- root/root 4267 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::oracle.3pm.gz
-rw-r--r-- root/root 5756 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::pg.3pm.gz
-rw-r--r-- root/root 3071 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::dbi::pg_fts.3pm.gz
-rw-r--r-- root/root 1952 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::memory.3pm.gz
-rw-r--r-- root/root 890 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::memory::feature_serializer.3pm.gz
-rw-r--r-- root/root 1223 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Adaptor::memory::iterator.3pm.gz
-rw-r--r-- root/root 4434 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator.3pm.gz
-rw-r--r-- root/root 1673 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::alignment.3pm.gz
-rw-r--r-- root/root 1793 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::clone.3pm.gz
-rw-r--r-- root/root 1578 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::coding.3pm.gz
-rw-r--r-- root/root 1682 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::gene.3pm.gz
-rw-r--r-- root/root 1541 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::match.3pm.gz
-rw-r--r-- root/root 1125 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::none.3pm.gz
-rw-r--r-- root/root 1542 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::orf.3pm.gz
-rw-r--r-- root/root 1671 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::processed_transcript.3pm.gz
-rw-r--r-- root/root 1719 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::so_transcript.3pm.gz
-rw-r--r-- root/root 1825 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::transcript.3pm.gz
-rw-r--r-- root/root 1482 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_acembly.3pm.gz
-rw-r--r-- root/root 1465 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_ensgene.3pm.gz
-rw-r--r-- root/root 1460 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_genscan.3pm.gz
-rw-r--r-- root/root 1463 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_refgene.3pm.gz
-rw-r--r-- root/root 1461 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_sanger22.3pm.gz
-rw-r--r-- root/root 1468 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_sanger22pseudo.3pm.gz
-rw-r--r-- root/root 1467 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_softberry.3pm.gz
-rw-r--r-- root/root 1462 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_twinscan.3pm.gz
-rw-r--r-- root/root 1463 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Aggregator::ucsc_unigene.3pm.gz
-rw-r--r-- root/root 1773 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Featname.3pm.gz
-rw-r--r-- root/root 6600 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Feature.3pm.gz
-rw-r--r-- root/root 1470 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Homol.3pm.gz
-rw-r--r-- root/root 6931 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::RelSegment.3pm.gz
-rw-r--r-- root/root 4697 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Segment.3pm.gz
-rw-r--r-- root/root 1856 2020-01-13 12:16 ./usr/share/man/man3/Bio::DB::GFF::Typename.3pm.gz
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/
-rw-r--r-- root/root 118715 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF.pm
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/Adaptor/
-rw-r--r-- root/root 31137 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/berkeleydb.pm
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/Adaptor/berkeleydb/
-rw-r--r-- root/root 1912 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm
-rw-r--r-- root/root 10057 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/biofetch.pm
-rw-r--r-- root/root 8617 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/biofetch_oracle.pm
-rw-r--r-- root/root 73792 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi.pm
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/
-rw-r--r-- root/root 7118 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm
-rw-r--r-- root/root 1577 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/iterator.pm
-rw-r--r-- root/root 25955 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysql.pm
-rw-r--r-- root/root 35502 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm
-rw-r--r-- root/root 671 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm
-rw-r--r-- root/root 28691 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/oracle.pm
-rw-r--r-- root/root 42454 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/pg.pm
-rw-r--r-- root/root 10419 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/dbi/pg_fts.pm
-rw-r--r-- root/root 21067 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/memory.pm
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/Adaptor/memory/
-rw-r--r-- root/root 1030 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/memory/feature_serializer.pm
-rw-r--r-- root/root 1762 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Adaptor/memory/iterator.pm
-rw-r--r-- root/root 17227 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator.pm
drwxr-xr-x root/root 0 2020-01-13 12:16 ./usr/share/perl5/Bio/DB/GFF/Aggregator/
-rw-r--r-- root/root 3677 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/alignment.pm
-rw-r--r-- root/root 4404 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/clone.pm
-rw-r--r-- root/root 2027 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/coding.pm
-rw-r--r-- root/root 2470 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/gene.pm
-rw-r--r-- root/root 1973 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/match.pm
-rw-r--r-- root/root 890 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/none.pm
-rw-r--r-- root/root 1782 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/orf.pm
-rw-r--r-- root/root 2580 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/processed_transcript.pm
-rw-r--r-- root/root 2669 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/so_transcript.pm
-rw-r--r-- root/root 2610 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/transcript.pm
-rw-r--r-- root/root 1821 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_acembly.pm
-rw-r--r-- root/root 1795 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_ensgene.pm
-rw-r--r-- root/root 1794 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_genscan.pm
-rw-r--r-- root/root 1794 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_refgene.pm
-rw-r--r-- root/root 1805 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_sanger22.pm
-rw-r--r-- root/root 1865 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_sanger22pseudo.pm
-rw-r--r-- root/root 1826 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_softberry.pm
-rw-r--r-- root/root 1804 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_twinscan.pm
-rw-r--r-- root/root 1803 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Aggregator/ucsc_unigene.pm
-rw-r--r-- root/root 2933 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Featname.pm
-rw-r--r-- root/root 36255 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Feature.pm
-rw-r--r-- root/root 1957 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Homol.pm
-rw-r--r-- root/root 34642 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/RelSegment.pm
-rw-r--r-- root/root 19016 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Segment.pm
-rw-r--r-- root/root 3965 2020-01-08 20:41 ./usr/share/perl5/Bio/DB/GFF/Typename.pm
lintian
-------
Setup apt archive
-----------------
Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1345 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1387 B]
Fetched 3347 B in 0s (295 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-7aUz6u/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-lintian-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 856 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [856 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 856 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-lintian-dummy.
(Reading database ... 24607 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
W: libbio-db-gff-perl changes: distribution-and-changes-mismatch sid unstable
W: libbio-db-gff-perl: no-manual-page [usr/bin/bp_das_server]
W: libbio-db-gff-perl source: upstream-metadata-field-unknown Homepage [debian/upstream/metadata]
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: binary
Build-Space: 4084
Build-Time: 13
Distribution: sid
Host Architecture: arm64
Install-Time: 19
Job: /tmp/debusine-fetch-exec-upload-lnxrromf/libbio-db-gff-perl_1.7.4-1.dsc
Lintian: warn
Machine Architecture: arm64
Package: libbio-db-gff-perl
Package-Time: 67
Source-Version: 1.7.4-1
Space: 4084
Status: successful
Version: 1.7.4-1
--------------------------------------------------------------------------------
Finished at 2024-11-16T21:54:50Z
Build needed 00:01:07, 4084k disk space