sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-08.freexian.com
+==============================================================================+
| libbio-db-swissprot-perl 1.7.4-1 (arm64) Sat, 16 Nov 2024 21:54:11 +0000 |
+==============================================================================+
Package: libbio-db-swissprot-perl
Version: 1.7.4-1
Source Version: 1.7.4-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary
I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.qTZoqTz2vA...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'
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| Chroot Setup Commands |
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rm -f /etc/resolv.conf
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Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-2fkfswn5/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/libbio-db-swissprot-perl-AGllUH/resolver-OUX66K' with '<<RESOLVERDIR>>'
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Get:1 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ InRelease
Ign:1 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ InRelease
Get:2 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ Release [606 B]
Get:4 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ Release.gpg
Ign:4 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ Release.gpg
Get:5 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ Packages [9246 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9952 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4909 kB]
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Reading package lists...
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The following packages will be upgraded:
apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
libsemanage2 libsmartcols1 libsystemd0 libudev1 libuuid1 libxml2 login
login.defs mount passwd util-linux
30 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
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Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libsystemd0 arm64 257~rc2-3 [416 kB]
Get:6 file:/build/libbio-db-swissprot-perl-AGllUH/resolver-P05EH8/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libudev1 arm64 257~rc2-3 [139 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 login.defs all 1:4.16.0-5 [185 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 passwd arm64 1:4.16.0-5 [1210 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
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Unpacking libmarkdown2:arm64 (2.2.7-2.1) over (2.2.7-2+b1) ...
Preparing to unpack .../9-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ...
Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) over (2.12.7+dfsg+really2.9.14-0.1) ...
Setting up bsdextrautils (2.40.2-11) ...
Setting up login.defs (1:4.16.0-5) ...
Installing new version of config file /etc/login.defs ...
Setting up libbrotli1:arm64 (1.1.0-2+b6) ...
Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
No schema files found: doing nothing.
Setting up libdpkg-perl (1.22.12~1.gbp82cafd) ...
Setting up mount (2.40.2-11) ...
Setting up libsemanage2:arm64 (3.7-2+b1) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libmarkdown2:arm64 (2.2.7-2.1) ...
Setting up login (1:4.16.0-2+really2.40.2-11) ...
Setting up dpkg-dev (1.22.12~1.gbp82cafd) ...
Setting up passwd (1:4.16.0-5) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Local sources
-------------
/tmp/debusine-fetch-exec-upload-2fkfswn5/libbio-db-swissprot-perl_1.7.4-1.dsc exists in /tmp/debusine-fetch-exec-upload-2fkfswn5; copying to chroot
I: NOTICE: Log filtering will replace 'build/libbio-db-swissprot-perl-AGllUH/libbio-db-swissprot-perl-1.7.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbio-db-swissprot-perl-AGllUH' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), build-essential, fakeroot, libbio-perl-perl, libhttp-message-perl, liblwp-useragent-chicaching-perl, libtest-most-perl, libtest-needs-perl, libtest-requiresinternet-perl, perl
Filtered Build-Depends: debhelper-compat (= 12), build-essential, fakeroot, libbio-perl-perl, libhttp-message-perl, liblwp-useragent-chicaching-perl, libtest-most-perl, libtest-needs-perl, libtest-requiresinternet-perl, perl
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [787 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [799 B]
Fetched 2195 B in 0s (188 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-P05EH8/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-strip-nondeterminism dwz fakeroot g++ g++-14 g++-14-aarch64-linux-gnu
g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
gcc-aarch64-linux-gnu libalgorithm-diff-perl libasan8 libbio-perl-perl
libc-dev-bin libc6-dev libcache-cache-perl libcache-fastmmap-perl
libcarp-assert-perl libcc1-0 libchi-perl libclass-load-perl
libcompress-lz4-perl libcompress-snappy-perl libcrypt-dev
libdata-serializer-perl libdata-stag-perl libdebhelper-perl
libdigest-jhash-perl libelf1t64 liberror-perl libexporter-tiny-perl
libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev
libhash-moreutils-perl libhwasan0 libipc-sharelite-perl libisl23 libitm1
liblist-moreutils-perl liblist-moreutils-xs-perl liblog-any-perl liblsan0
liblwp-useragent-chicaching-perl libmoox-types-mooselike-numeric-perl
libmoox-types-mooselike-perl libmpc3 libmpfr6 libossp-uuid-perl
libossp-uuid16 libparams-validate-perl libsnappy1v5 libstdc++-14-dev
libstring-rewriteprefix-perl libsub-uplevel-perl libtask-weaken-perl
libtest-deep-perl libtest-differences-perl libtest-exception-perl
libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl
libtest-warn-perl libtext-diff-perl libtime-duration-parse-perl libtool
libtsan2 libtype-tiny-perl libtypes-path-tiny-perl libtypes-uri-perl
libtypes-uuid-perl libubsan1 liburi-fromhash-perl libuuid-tiny-perl
linux-libc-dev m4 po-debconf rpcsvc-proto sgml-base
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc dh-make gcc-14-doc gcc-multilib manpages-dev flex bison gdb
gcc-doc gdb-aarch64-linux-gnu bioperl libxml-sax-expatxs-perl libc-devtools
glibc-doc libconfig-general-perl libcrypt-blowfish-perl libcrypt-cbc-perl
libfreezethaw-perl libjson-perl libphp-serialization-perl libxml-dumper-perl
libxml-simple-perl libyaml-perl libyaml-syck-perl
libmoox-types-setobject-perl uuid libstdc++-14-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk libdevel-lexalias-perl libattean-perl
librdf-trine-perl m4-doc libmail-box-perl sgml-base-doc
Recommended packages:
libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl libace-perl
libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl
libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl
libhtml-tableextract-perl libpostscript-perl libset-scalar-perl
libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl
libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl
libxml-simple-perl libxml-twig-perl libxml-writer-perl manpages manpages-dev
perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl
libxml-perl libarchive-cpio-perl libltdl-dev libref-util-perl
libtype-tiny-xs-perl libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-strip-nondeterminism dwz fakeroot g++ g++-14 g++-14-aarch64-linux-gnu
g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
gcc-aarch64-linux-gnu libalgorithm-diff-perl libasan8 libbio-perl-perl
libc-dev-bin libc6-dev libcache-cache-perl libcache-fastmmap-perl
libcarp-assert-perl libcc1-0 libchi-perl libclass-load-perl
libcompress-lz4-perl libcompress-snappy-perl libcrypt-dev
libdata-serializer-perl libdata-stag-perl libdebhelper-perl
libdigest-jhash-perl libelf1t64 liberror-perl libexporter-tiny-perl
libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev
libhash-moreutils-perl libhwasan0 libipc-sharelite-perl libisl23 libitm1
liblist-moreutils-perl liblist-moreutils-xs-perl liblog-any-perl liblsan0
liblwp-useragent-chicaching-perl libmoox-types-mooselike-numeric-perl
libmoox-types-mooselike-perl libmpc3 libmpfr6 libossp-uuid-perl
libossp-uuid16 libparams-validate-perl libsnappy1v5 libstdc++-14-dev
libstring-rewriteprefix-perl libsub-uplevel-perl libtask-weaken-perl
libtest-deep-perl libtest-differences-perl libtest-exception-perl
libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl
libtest-warn-perl libtext-diff-perl libtime-duration-parse-perl libtool
libtsan2 libtype-tiny-perl libtypes-path-tiny-perl libtypes-uri-perl
libtypes-uuid-perl libubsan1 liburi-fromhash-perl libuuid-tiny-perl
linux-libc-dev m4 po-debconf rpcsvc-proto sbuild-build-depends-main-dummy
sgml-base
0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded.
Need to get 65.5 MB of archives.
After this operation, 252 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B]
Get:2 http://deb.debian.org/debian sid/main arm64 sgml-base all 1.31 [15.4 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:18 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:19 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:20 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:29 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:31 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:32 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:34 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:36 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:37 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:38 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:43 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 libalgorithm-diff-perl all 1.201-1 [43.3 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 libdata-stag-perl all 0.14-3 [448 kB]
Get:51 http://deb.debian.org/debian sid/main arm64 libbio-perl-perl all 1.7.8-1 [2603 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 liberror-perl all 0.17029-2 [29.0 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 libipc-sharelite-perl arm64 0.17-5+b3 [22.7 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 libcache-cache-perl all 1.08-3 [63.4 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 libcompress-lz4-perl arm64 0.25+ds-2+b4 [12.1 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 libsnappy1v5 arm64 1.2.1-1+b1 [28.7 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 libcompress-snappy-perl arm64 0.25+ds-1+b1 [10.2 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 libcache-fastmmap-perl arm64 1.57-2+b4 [48.5 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libcarp-assert-perl all 0.22-1 [16.7 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 libclass-load-perl all 0.25-2 [15.3 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libdata-serializer-perl all 0.65-2 [66.0 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 libdigest-jhash-perl arm64 0.10-2+b4 [13.9 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 libhash-moreutils-perl all 0.06-2 [10.8 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 libexporter-tiny-perl all 1.006002-1 [38.7 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 liblist-moreutils-xs-perl arm64 0.430-4+b2 [37.7 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 liblist-moreutils-perl all 0.430-2 [46.9 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 liblog-any-perl all 1.717-1 [78.9 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 libmoox-types-mooselike-perl all 0.29-2 [18.4 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 libmoox-types-mooselike-numeric-perl all 1.03-2 [5564 B]
Get:70 http://deb.debian.org/debian sid/main arm64 libossp-uuid16 arm64 1.6.3-1 [31.2 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 libossp-uuid-perl arm64 1.6.3-1 [27.0 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 libstring-rewriteprefix-perl all 0.009-1 [7140 B]
Get:73 http://deb.debian.org/debian sid/main arm64 libtask-weaken-perl all 1.06-2 [9364 B]
Get:74 http://deb.debian.org/debian sid/main arm64 libtime-duration-parse-perl all 0.16-1 [8520 B]
Get:75 http://deb.debian.org/debian sid/main arm64 libchi-perl all 0.61-1 [111 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 libtype-tiny-perl all 2.004000-1 [357 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 libtypes-path-tiny-perl all 0.006-2 [9928 B]
Get:78 http://deb.debian.org/debian sid/main arm64 libuuid-tiny-perl all 1.0400-3 [17.8 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 libtypes-uuid-perl all 0.004-3 [11.3 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 libparams-validate-perl arm64 1.31-2+b3 [60.8 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 liburi-fromhash-perl all 0.05-2 [11.2 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 libtypes-uri-perl all 0.007-2 [8412 B]
Get:83 http://deb.debian.org/debian sid/main arm64 liblwp-useragent-chicaching-perl all 0.04-2 [24.5 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libsub-uplevel-perl all 0.2800-3 [14.0 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libtest-deep-perl all 1.204-1 [52.9 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libtext-diff-perl all 1.45-2 [27.2 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libtest-differences-perl all 0.71-1 [17.9 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libtest-exception-perl all 0.43-3 [16.9 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 libtest-warn-perl all 0.37-2 [14.5 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libtest-most-perl all 0.38-1 [25.1 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libtest-needs-perl all 0.002010-1 [9352 B]
Get:92 http://deb.debian.org/debian sid/main arm64 libtest-requiresinternet-perl all 0.05-4 [6864 B]
debconf: delaying package configuration, since apt-utils is not installed
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in all)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: libbio-db-swissprot-perl
Binary: libbio-db-swissprot-perl
Architecture: all
Version: 1.7.4-1
Maintainer: Debian Med team <debian-med@lists.debian.org>
Uploaders: Michael R. Crusoe <michael.crusoe@gmail.com>
Homepage: https://metacpan.org/release/Bio-DB-SwissProt
Standards-Version: 4.4.1
Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-swissprot-perl
Vcs-Git: https://salsa.debian.org/med-team/libbio-db-swissprot-perl.git
Testsuite: autopkgtest-pkg-perl
Build-Depends: debhelper-compat (= 12)
Build-Depends-Indep: libbio-perl-perl, libhttp-message-perl, liblwp-useragent-chicaching-perl, libtest-most-perl, libtest-needs-perl, libtest-requiresinternet-perl, perl
Package-List:
libbio-db-swissprot-perl deb perl optional arch=all
Checksums-Sha1:
df841f595bff9f09f73887ff5009906b06296c13 18010 libbio-db-swissprot-perl_1.7.4.orig.tar.gz
b598a0d712ea613058a9404b69c321ab59586602 1832 libbio-db-swissprot-perl_1.7.4-1.debian.tar.xz
Checksums-Sha256:
8245e437ed59a389b2db3e961a1361559eef7bcca873c77d8588d2a64ed9b170 18010 libbio-db-swissprot-perl_1.7.4.orig.tar.gz
70164281287a830529cde6fdb91ff5759200dcaf5a08b5219eacdd39831ab18f 1832 libbio-db-swissprot-perl_1.7.4-1.debian.tar.xz
Files:
d2813bfca04132396be87fe9a7e39be8 18010 libbio-db-swissprot-perl_1.7.4.orig.tar.gz
e37f1dc98e286faba057ca9bd2bd9f28 1832 libbio-db-swissprot-perl_1.7.4-1.debian.tar.xz
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gpgv: Signature made Wed Jan 1 13:50:33 2020 UTC
gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libbio-db-swissprot-perl_1.7.4-1.dsc: no acceptable signature found
dpkg-source: info: extracting libbio-db-swissprot-perl in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libbio-db-swissprot-perl_1.7.4.orig.tar.gz
dpkg-source: info: unpacking libbio-db-swissprot-perl_1.7.4-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package libbio-db-swissprot-perl
dpkg-buildpackage: info: source version 1.7.4-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <michael.crusoe@gmail.com>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
debian/rules clean
dh clean
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
/usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro"
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for Bio::DB::SwissProt
Writing MYMETA.yml and MYMETA.json
dh_auto_build
make -j8
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp lib/Bio/DB/SwissProt.pm blib/lib/Bio/DB/SwissProt.pm
Manifying 1 pod document
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test
make -j8 test TEST_VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ...........
1..1
ok 1 - Bio/DB/SwissProt.pm loaded ok
ok
t/author-eol.t ........... skipped: these tests are for testing by the author
t/author-mojibake.t ...... skipped: these tests are for testing by the author
t/author-pod-coverage.t .. skipped: these tests are for testing by the author
t/author-pod-syntax.t .... skipped: these tests are for testing by the author
t/SwissProt.t ............ skipped: no host: www.google.com
All tests successful.
Files=6, Tests=1, 1 wallclock secs ( 0.03 usr 0.02 sys + 0.36 cusr 0.07 csys = 0.48 CPU)
Result: PASS
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep
dh_auto_install --destdir=debian/libbio-db-swissprot-perl/
make -j8 install DESTDIR=/<<PKGBUILDDIR>>/debian/libbio-db-swissprot-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Manifying 1 pod document
Installing /<<PKGBUILDDIR>>/debian/libbio-db-swissprot-perl/usr/share/perl5/Bio/DB/SwissProt.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-db-swissprot-perl/usr/share/man/man3/Bio::DB::SwissProt.3pm
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs
dh_installchangelogs
dh_installman
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libbio-db-swissprot-perl' in '../libbio-db-swissprot-perl_1.7.4-1_all.deb'.
dpkg-genbuildinfo --build=binary -O../libbio-db-swissprot-perl_1.7.4-1_arm64.buildinfo
dpkg-genchanges --build=binary -O../libbio-db-swissprot-perl_1.7.4-1_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-16T21:55:13Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libbio-db-swissprot-perl_1.7.4-1_arm64.changes:
-----------------------------------------------
Format: 1.8
Date: Wed, 01 Jan 2020 13:00:17 +0100
Source: libbio-db-swissprot-perl
Binary: libbio-db-swissprot-perl
Architecture: all
Version: 1.7.4-1
Distribution: sid
Urgency: medium
Maintainer: Debian Med team <debian-med@lists.debian.org>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
libbio-db-swissprot-perl - Database object interface to SwissProt retrieval
Changes:
libbio-db-swissprot-perl (1.7.4-1) unstable; urgency=medium
.
* New upstream version
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+------------------------------------------------------------------------------+
| Buildinfo |
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Format: 1.0
Source: libbio-db-swissprot-perl
Binary: libbio-db-swissprot-perl
Architecture: all
Version: 1.7.4-1
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Sat, 16 Nov 2024 21:55:13 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
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LANG="en_US.UTF-8"
LC_ALL="C.UTF-8"
SOURCE_DATE_EPOCH="1577880017"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libbio-db-swissprot-perl_1.7.4-1_all.deb
----------------------------------------
new Debian package, version 2.0.
size 11772 bytes: control archive=1024 bytes.
1004 bytes, 23 lines control
411 bytes, 5 lines md5sums
Package: libbio-db-swissprot-perl
Version: 1.7.4-1
Architecture: all
Maintainer: Debian Med team <debian-med@lists.debian.org>
Installed-Size: 35
Depends: perl:any, libbio-perl-perl, libhttp-message-perl, libwww-perl
Breaks: libbio-perl-perl (<< 1.7.3)
Replaces: libbio-perl-perl (<< 1.7.3)
Section: perl
Priority: optional
Homepage: https://metacpan.org/release/Bio-DB-SwissProt
Description: Database object interface to SwissProt retrieval
SwissProt is a curated database of proteins managed by the Swiss
Bioinformatics Institute. Additional tools for parsing and manipulating
swissprot files can be found at
ftp://ftp.ebi.ac.uk/pub/software/swissprot/Swissknife/.
.
Allows the dynamic retrieval of Sequence objects (Bio::Seq) from the
SwissProt database via an Expasy retrieval.
.
In order to make changes transparent host type (currently only expasy)
and location (default to Switzerland) is separated out. This allows the
user to pick the closest Expasy mirror for running their queries.
drwxr-xr-x root/root 0 2020-01-01 12:00 ./
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/doc/libbio-db-swissprot-perl/
-rw-r--r-- root/root 224 2020-01-01 12:00 ./usr/share/doc/libbio-db-swissprot-perl/changelog.Debian.gz
-rw-r--r-- root/root 222 2019-12-07 22:07 ./usr/share/doc/libbio-db-swissprot-perl/changelog.gz
-rw-r--r-- root/root 1068 2020-01-01 11:57 ./usr/share/doc/libbio-db-swissprot-perl/copyright
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/man/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/man/man3/
-rw-r--r-- root/root 3733 2020-01-01 12:00 ./usr/share/man/man3/Bio::DB::SwissProt.3pm.gz
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/perl5/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/perl5/Bio/
drwxr-xr-x root/root 0 2020-01-01 12:00 ./usr/share/perl5/Bio/DB/
-rw-r--r-- root/root 15888 2019-12-07 22:07 ./usr/share/perl5/Bio/DB/SwissProt.pm
lintian
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W: libbio-db-swissprot-perl changes: distribution-and-changes-mismatch sid unstable
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: binary
Build-Space: 456
Build-Time: 5
Distribution: sid
Host Architecture: arm64
Install-Time: 21
Job: /tmp/debusine-fetch-exec-upload-2fkfswn5/libbio-db-swissprot-perl_1.7.4-1.dsc
Lintian: warn
Machine Architecture: arm64
Package: libbio-db-swissprot-perl
Package-Time: 62
Source-Version: 1.7.4-1
Space: 456
Status: successful
Version: 1.7.4-1
--------------------------------------------------------------------------------
Finished at 2024-11-16T21:55:13Z
Build needed 00:01:02, 456k disk space