Uses of Interface
net.imglib2.RealLocalizable
Packages that use RealLocalizable
Package
Description
-
Uses of RealLocalizable in net.imglib2
Classes in net.imglib2 with type parameters of type RealLocalizableModifier and TypeClassDescriptionstatic final class
KDTree.DimComparator<L extends RealLocalizable>
Compare RealLocalizables by comparing their coordinates in dimension d.Subinterfaces of RealLocalizable in net.imglib2Modifier and TypeInterfaceDescriptioninterface
Cursor<T>
A Cursor iterates over a set of Localizable elements, for example the image values at the (integer) pixel positions of an image.interface
TheLocalizable
interface can localize itself in an n-dimensional discrete space.interface
RandomAccess<T>
interface
RealCursor<T>
A RealCursor iterates over a set of RealLocalizable elements, for example intensity values sampled at a finite set of arbitrary real positions.interface
Classes in net.imglib2 that implement RealLocalizableModifier and TypeClassDescriptionclass
Abstract implementation ofCursor
.class
Abstract implementation ofCursor
.class
An abstract class that implements theLocalizable
interface using a long[] array to maintain position.class
An abstract class that implements theLocalizable
interface using an int[] array to maintain position.class
Abstract base class for localizingCursor
s.class
Abstract base class for localizingCursor
s.class
An abstract class that implements theRealLocalizable
interface using an array of doubles to maintain positionfinal class
protected static final class
A KDTreeNode that stores it's value as a Sampler.protected static final class
A KDTreeNode that stores it's value as a reference.class
KDTreeNode<T>
Abstract base class for nodes in a KDTree.class
A Point is a position in Euclidean space specified in integer coordinates.class
class
A point is a location in EuclideanSpace.class
Methods in net.imglib2 with type parameters of type RealLocalizableModifier and TypeMethodDescriptionprotected <L extends RealLocalizable>
KDTree.ValueNode<T> protected <L extends RealLocalizable>
KDTree.ValueNode<T> Construct the tree by recursively adding nodes.protected <L extends RealLocalizable>
KDTree.ValueNode<T> KDTree.makeNode
(ListIterator<L> first, ListIterator<L> last, int d) protected <L extends RealLocalizable>
KDTree.ValueNode<T> KDTree.makeNode
(ListIterator<L> first, ListIterator<L> last, int d, List<T> values, int[] permutation) Construct the tree by recursively adding nodes.protected static <L extends RealLocalizable>
booleanKDTree.verifyDimensions
(List<L> positions, int n) Check whether all positions in the positions list have dimension n.Methods in net.imglib2 with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoid
RealPoint.move
(RealLocalizable localizable) void
RealPositionable.move
(RealLocalizable distance) Move the element relative to its current location using aRealLocalizable
as distance vector.void
RealPoint.setPosition
(RealLocalizable localizable) void
RealPositionable.setPosition
(RealLocalizable position) Place the element at the same location as a givenRealLocalizable
final double
KDTreeNode.squDistanceTo
(RealLocalizable p) Compute the squared distance from p to this node.Constructors in net.imglib2 with parameters of type RealLocalizableModifierConstructorDescriptionKDTreeNode
(RealLocalizable position, int dimension, KDTreeNode<T> left, KDTreeNode<T> right) RealPoint
(RealLocalizable localizable) Create a point using the position and dimensionality of aRealLocalizable
SamplerNode
(Sampler<T> sampler, RealLocalizable position, int dimension, KDTree.SamplerNode<T> left, KDTree.SamplerNode<T> right) ValueNode
(T value, RealLocalizable position, int dimension, KDTree.ValueNode<T> left, KDTree.ValueNode<T> right) -
Uses of RealLocalizable in net.imglib2.converter
Classes in net.imglib2.converter that implement RealLocalizableModifier and TypeClassDescriptionclass
TODOclass
TODOclass
TODOMethods in net.imglib2.converter with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoid
AbstractConvertedRealRandomAccess.move
(RealLocalizable localizable) void
AbstractConvertedRealRandomAccess.setPosition
(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.converter.read
Classes in net.imglib2.converter.read that implement RealLocalizableModifier and TypeClassDescriptionclass
ConvertedCursor<A,
B extends Type<B>> TODOfinal class
ConvertedRandomAccess<A,
B extends Type<B>> TODOfinal class
ConvertedRealRandomAccess<A,
B extends Type<B>> TODO -
Uses of RealLocalizable in net.imglib2.converter.readwrite
Classes in net.imglib2.converter.readwrite that implement RealLocalizable -
Uses of RealLocalizable in net.imglib2.display.projector
Classes in net.imglib2.display.projector that implement RealLocalizableModifier and TypeClassDescriptionclass
Base class for 2D projectors.class
A general 2D Projector that uses two dimensions as input to create the 2D result.class
A general 2D Projector that uses two dimensions as input to create the 2D result. -
Uses of RealLocalizable in net.imglib2.display.projector.composite
Classes in net.imglib2.display.projector.composite that implement RealLocalizableModifier and TypeClassDescriptionclass
Creates a composite image from across multiple dimensional positions along an axis (typically, but not necessarily, channels).class
Creates a composite image from across multiple dimensional positions along an axis (typically, but not necessarily, channels). -
Uses of RealLocalizable in net.imglib2.display.projector.sampler
Classes in net.imglib2.display.projector.sampler that implement RealLocalizableModifier and TypeClassDescriptionclass
SamplingProjector2D<A,
B> A general 2D Projector that uses three dimensions as input to create the 2D result. -
Uses of RealLocalizable in net.imglib2.display.projector.specialized
Classes in net.imglib2.display.projector.specialized that implement RealLocalizableModifier and TypeClassDescriptionclass
ArrayImgXYByteProjector<A extends GenericByteType<A>>
Fast implementation of aAbstractProjector2D
that selects a 2D data plain from an ByteType ArrayImg.class
ArrayImgXYShortProjector<A extends GenericShortType<A>>
Fast implementation of aAbstractProjector2D
that selects a 2D data plain from an ShortType ArrayImg.class
PlanarImgXYByteProjector<A extends GenericByteType<A>>
Fast implementation of aAbstractProjector2D
that selects a 2D data plain from a ByteType PlanarImg.class
PlanarImgXYShortProjector<A extends GenericShortType<A>>
Fast implementation of aAbstractProjector2D
that selects a 2D data plain from an ShortType PlanarImg. -
Uses of RealLocalizable in net.imglib2.display.projector.volatiles
Classes in net.imglib2.display.projector.volatiles that implement RealLocalizableModifier and TypeClassDescriptionclass
Volatile2DRandomAccessibleProjector<T,
A extends Volatile<T>, B> IterableIntervalProjector2D
forVolatile
input. -
Uses of RealLocalizable in net.imglib2.img.array
Classes in net.imglib2.img.array that implement RealLocalizableModifier and TypeClassDescriptionclass
AbstractArrayCursor<T extends NativeType<T>>
class
AbstractArrayLocalizingCursor<T extends NativeType<T>>
final class
ArrayCursor<T extends NativeType<T>>
final class
ArrayLocalizingCursor<T extends NativeType<T>>
final class
ArrayLocalizingSubIntervalCursor<T extends NativeType<T>>
LocalizingAbstractArrayLocalizingCursor
on anArrayImg
.class
ArrayRandomAccess<T extends NativeType<T>>
RandomAccess
on anArrayImg
.final class
ArraySubIntervalCursor<T extends NativeType<T>>
-
Uses of RealLocalizable in net.imglib2.img.cell
Classes in net.imglib2.img.cell that implement RealLocalizableModifier and TypeClassDescriptionclass
CellCursor<T extends NativeType<T>,
C extends Cell<?>> Cursor
on aAbstractCellImg
.class
CellLocalizingCursor<T extends NativeType<T>,
C extends Cell<?>> LocalizingCursor
on aAbstractCellImg
.class
CellRandomAccess<T extends NativeType<T>,
C extends Cell<?>> RandomAccess
on aAbstractCellImg
. -
Uses of RealLocalizable in net.imglib2.img.list
Classes in net.imglib2.img.list that implement RealLocalizableModifier and TypeClassDescriptionclass
class
class
final class
ListCursor<T>
final class
class
RandomAccess
on aListImg
. -
Uses of RealLocalizable in net.imglib2.img.planar
Classes in net.imglib2.img.planar that implement RealLocalizableModifier and TypeClassDescriptionclass
PlanarCursor<T extends NativeType<T>>
Basic Iterator forPlanarContainers
class
PlanarCursor1D<T extends NativeType<T>>
Basic Iterator for 1dPlanarContainers
class
PlanarCursor2D<T extends NativeType<T>>
Basic Iterator for 2dPlanarContainers
class
PlanarLocalizingCursor<T extends NativeType<T>>
Localizing Iterator for aPlanarContainers
class
PlanarLocalizingCursor1D<T extends NativeType<T>>
TODOclass
PlanarLocalizingCursor2D<T extends NativeType<T>>
TODOclass
PlanarPlaneSubsetCursor<T extends NativeType<T>>
Basic Iterator forPlanarContainers
class
PlanarPlaneSubsetLocalizingCursor<T extends NativeType<T>>
Cursor optimized for one plane in an PlanarImg.class
PlanarRandomAccess<T extends NativeType<T>>
RandomAccess
on aPlanarImg
.class
PlanarRandomAccess1D<T extends NativeType<T>>
RandomAccess
for a 1-dimensionalPlanarImg
. -
Uses of RealLocalizable in net.imglib2.img.sparse
Classes in net.imglib2.img.sparse that implement RealLocalizableModifier and TypeClassDescriptionfinal class
NtreeCursor<T extends NativeType<T>>
final class
NtreeRandomAccess<T extends NativeType<T>>
-
Uses of RealLocalizable in net.imglib2.interpolation.neighborsearch
Classes in net.imglib2.interpolation.neighborsearch that implement RealLocalizableModifier and TypeClassDescriptionclass
InverseDistanceWeightingInterpolator<T extends RealType<T>>
RealRandomAccess
to aKNearestNeighborSearch
whose sample value is generated by weighting the k nearest neighbors of a query real coordinate by their inverse distance to an arbitrary power p.class
Nearest-neighbor interpolation implemented byNearestNeighborSearch
. -
Uses of RealLocalizable in net.imglib2.interpolation.randomaccess
Classes in net.imglib2.interpolation.randomaccess that implement RealLocalizableModifier and TypeClassDescriptionclass
RealRandomAccess
to aRandomAccess
by nearest floor interpolation (i.e., the value is sampled at floor(x)).class
LanczosInterpolator<T extends RealType<T>>
n-dimensional double-based Lanczos Interpolationclass
RealRandomAccess
to aRandomAccess
by nearest neighbor interpolation.class
NLinearInterpolator<T extends NumericType<T>>
Performs multi-linear interpolation.class
NLinearInterpolator1D<T extends NumericType<T>>
class
NLinearInterpolator2D<T extends NumericType<T>>
class
NLinearInterpolator3D<T extends NumericType<T>>
class
N-linear interpolator for ARGB values with overflow check. -
Uses of RealLocalizable in net.imglib2.iterator
Classes in net.imglib2.iterator that implement RealLocalizableModifier and TypeClassDescriptionclass
Use this class to iterate a virtualInterval
in flat order, that is: row by row, plane by plane, cube by cube, ...class
Use this class to iterate a virtualInterval
in flat order, that is: row by row, plane by plane, cube by cube, ...class
Use this class to iterate a virtual rectangularInterval
whose min coordinates are at 0n in flat order, that is: row by row, plane by plane, cube by cube, ...class
AIntervalIterator
that has an adjustable offsetclass
ALocalizingIntervalIterator
that has an adjustable offsetclass
Use this class to iterate a virtual rectangularInterval
whose min coordinates are at 0n in flat order, that is: row by row, plane by plane, cube by cube, ... -
Uses of RealLocalizable in net.imglib2.neighborsearch
Methods in net.imglib2.neighborsearch that return RealLocalizableModifier and TypeMethodDescriptionKNearestNeighborSearch.getPosition
(int i) Access the position of the ith nearest neighbor, ordered by square Euclidean distance.KNearestNeighborSearchOnIterableRealInterval.getPosition()
KNearestNeighborSearchOnIterableRealInterval.getPosition
(int i) KNearestNeighborSearchOnKDTree.getPosition()
KNearestNeighborSearchOnKDTree.getPosition
(int i) NearestNeighborSearch.getPosition()
Access the position of the nearest neighbor, ordered by square Euclidean distance.NearestNeighborSearchOnIterableRealInterval.getPosition()
NearestNeighborSearchOnKDTree.getPosition()
RadiusNeighborSearch.getPosition
(int i) Access the position of the ith neighbor within radius.RadiusNeighborSearchOnKDTree.getPosition
(int i) Methods in net.imglib2.neighborsearch with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoid
KNearestNeighborSearch.search
(RealLocalizable reference) Perform k-nearest-neighbor search for a reference coordinate.void
KNearestNeighborSearchOnIterableRealInterval.search
(RealLocalizable reference) void
KNearestNeighborSearchOnKDTree.search
(RealLocalizable reference) void
NearestNeighborSearch.search
(RealLocalizable reference) Perform nearest-neighbor search for a reference coordinate.void
NearestNeighborSearchOnIterableRealInterval.search
(RealLocalizable reference) void
NearestNeighborSearchOnKDTree.search
(RealLocalizable p) void
RadiusNeighborSearch.search
(RealLocalizable reference, double radius, boolean sortResults) Perform neighbor search within a radius about a reference coordinate.void
RadiusNeighborSearchOnKDTree.search
(RealLocalizable reference, double radius, boolean sortResults) protected final double
KNearestNeighborSearchOnIterableRealInterval.squareDistance
(RealLocalizable query) Calculate the square Euclidean distance of a query location to the location stored in referenceLocation.protected final double
NearestNeighborSearchOnIterableRealInterval.squareDistance
(RealLocalizable query) Calculate the square Euclidean distance of a query location to the location stored in referenceLocation. -
Uses of RealLocalizable in net.imglib2.outofbounds
Subinterfaces of RealLocalizable in net.imglib2.outofboundsClasses in net.imglib2.outofbounds that implement RealLocalizableModifier and TypeClassDescriptionclass
Abstract implementation of shared functions for mirroring out of bounds.class
AbstractOutOfBoundsValue<T extends Type<T>>
class
Repeat the boundary pixels.class
OutOfBoundsConstantValue<T extends Type<T>>
final class
Coordinates out of image bounds are mirrored between boundary coordinates.class
OutOfBoundsMirrorExpWindowing<T extends NumericType<T>>
Adds a exponential windowing to the mirrored content outside the Interval boundariesclass
Coordinates out of image bounds are mirrored at boundary coordinates.class
Coordinates out of image bounds are periodically repeated.class
OutOfBoundsRandomValue<T extends RealType<T>>
Return a random value in a certain range when outside of the Intervalfinal class
Methods in net.imglib2.outofbounds with parameters of type RealLocalizableModifier and TypeMethodDescriptionvoid
RealOutOfBoundsRealRandomAccess.move
(RealLocalizable localizable) void
RealOutOfBoundsRealRandomAccess.setPosition
(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.position.transform
Classes in net.imglib2.position.transform that implement RealLocalizableModifier and TypeClassDescriptionclass
AbstractPositionableTransform<LocalizablePositionable extends Localizable & Positionable>
ARealPositionable
that drives aPositionable
to somehow derived discrete coordinates.class
Floor<LocalizablePositionable extends Localizable & Positionable>
ARealPositionable
that drives aPositionable
to its floor discrete coordinates.class
FloorOffset<LocalizablePositionable extends Localizable & Positionable>
ARealPositionable
that drives aPositionable
to its floor discrete coordinates plus a discrete offset vector.class
Round<LocalizablePositionable extends Localizable & Positionable>
ARealPositionable
that drives aPositionable
to its round discrete coordinates:f = r < 0 ? (long)( r - 0.5 ) : (long)( r + 0.5 )
Methods in net.imglib2.position.transform with parameters of type RealLocalizableModifier and TypeMethodDescriptionprotected void
FloorOffset.f
(RealLocalizable r, long[] f) static final void
Floor.floor
(RealLocalizable r, long[] f) void
Floor.move
(RealLocalizable localizable) void
FloorOffset.move
(RealLocalizable localizable) void
Round.move
(RealLocalizable localizable) static final void
Round.round
(RealLocalizable r, long[] f) void
Floor.setPosition
(RealLocalizable localizable) void
FloorOffset.setPosition
(RealLocalizable localizable) void
Round.setPosition
(RealLocalizable localizable) Constructors in net.imglib2.position.transform with parameters of type RealLocalizableModifierConstructorDescriptionFloor
(RealLocalizable origin, LocalizablePositionable target) FloorOffset
(RealLocalizable origin, LocalizablePositionable target, long[] offset) FloorOffset
(RealLocalizable origin, LocalizablePositionable target, Localizable offset) Round
(RealLocalizable origin, LocalizablePositionable target) -
Uses of RealLocalizable in net.imglib2.util
Methods in net.imglib2.util with parameters of type RealLocalizableModifier and TypeMethodDescriptionstatic boolean
Intervals.contains
(RealInterval containing, RealLocalizable contained) Test whether thecontaining
interval contains thecontained
point.static final double
Util.distance
(RealLocalizable position1, RealLocalizable position2) static String
Util.printCoordinates
(RealLocalizable localizable) -
Uses of RealLocalizable in net.imglib2.view
Classes in net.imglib2.view that implement RealLocalizableModifier and TypeClassDescriptionfinal class
class
class
class
final class
final class
ACursor
that iterates anyRandomAccessibleInterval
by moving aRandomAccess
in flat iteration order.protected final class
class
class
static final class
ARandomAccess
on aStackView
.static class
ARandomAccess
on aStackView
.class
final class
final class
TODO -
Uses of RealLocalizable in net.imglib2.view.composite
Classes in net.imglib2.view.composite that implement RealLocalizable -
Uses of RealLocalizable in net.imglib2.view.iteration
Classes in net.imglib2.view.iteration that implement RealLocalizableModifier and TypeClassDescriptionclass
Wrap a cursor that runs on a hyperslice and apply coordinate transform on localize calls.