deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: amd64
Depends: libc6 (>= 2.4), python3 (<< 3.14), python3 (>= 3.12~), python3-numpy, python3-pysam,
python3:any, python3-joblib
Description: |-
structural variant calling
TIDDIT is a tool to used to identify chromosomal rearrangements using
Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter-
chromosomal translocations, deletions, tandem-duplications and
inversions, using supplementary alignments as well as discordant pairs.
.
TIDDIT has two analysis modules. The sv mode, which is used to search
for structural variants. And the cov mode that analyse the read depth of
a bam file and generates a coverage report.
Homepage: https://github.com/SciLifeLab/TIDDIT
Installed-Size: '2560'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: tiddit
Priority: optional
Section: science
Source: tiddit (3.6.1+dfsg-1)
Version: 3.6.1+dfsg-1+b3
srcpkg_name: tiddit
srcpkg_version: 3.6.1+dfsg-1