libpappsomspp
Library for mass spectrometry
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#include <timsddaprecursors.h>
Public Attributes | |
std::size_t | parent_frame = 0 |
std::size_t | precursor_id = 0 |
std::size_t | scan_mobility_start = 0 |
std::size_t | scan_mobility_end = 0 |
std::size_t | ms1_index = 0 |
std::size_t | ms2_index = 0 |
double | isolationMz = 0 |
double | isolationWidth = 0 |
float | collisionEnergy = 0 |
std::vector< std::size_t > | tims_frame_list |
PrecursorIonData | precursor_ion_data |
Definition at line 60 of file timsddaprecursors.h.
float pappso::TimsDdaPrecursors::SpectrumDescr::collisionEnergy = 0 |
Definition at line 70 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
double pappso::TimsDdaPrecursors::SpectrumDescr::isolationMz = 0 |
Definition at line 68 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
double pappso::TimsDdaPrecursors::SpectrumDescr::isolationWidth = 0 |
Definition at line 69 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::ms1_index = 0 |
Definition at line 66 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), and pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::ms2_index = 0 |
Definition at line 67 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), pappso::TimsMsRunReaderMs2::qualifiedMassSpectrum(), and pappso::TimsMsRunReaderMs2Selected::qualifiedMassSpectrum().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::parent_frame = 0 |
Definition at line 62 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::precursor_id = 0 |
Definition at line 63 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
PrecursorIonData pappso::TimsDdaPrecursors::SpectrumDescr::precursor_ion_data |
Definition at line 72 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::scan_mobility_end = 0 |
Definition at line 65 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
std::size_t pappso::TimsDdaPrecursors::SpectrumDescr::scan_mobility_start = 0 |
Definition at line 64 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel(), and pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel().
std::vector<std::size_t> pappso::TimsDdaPrecursors::SpectrumDescr::tims_frame_list |
Definition at line 71 of file timsddaprecursors.h.
Referenced by pappso::TimsDdaPrecursors::fillSpectrumDescriptionWithSqlRecord(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithPrecursorId(), pappso::TimsDdaPrecursors::getSpectrumDescrWithScanCoordinates(), and pappso::TimsDdaPrecursors::ms2ReaderSpectrumCollectionByMsLevel().