libpappsomspp
Library for mass spectrometry
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pappso::BafAsciiMsRunReader Member List

This is the complete list of members for pappso::BafAsciiMsRunReader, including all inherited members.

accept(const QString &file_name) const overridepappso::BafAsciiMsRunReaderprotectedvirtual
acquireDevice() overridepappso::BafAsciiMsRunReadervirtual
BafAsciiMsRunReader(MsRunIdCstSPtr &msrun_id_csp)pappso::BafAsciiMsRunReader
craftLineParserRegExp(QString &pattern) constpappso::BafAsciiMsRunReaderprotected
craftLineParserRegExpPattern() constpappso::BafAsciiMsRunReaderprotected
getMsRunId() constpappso::MsRunReader
getRetentionTimeLine()pappso::MsRunReadervirtual
getTicChromatogram()pappso::MsRunReadervirtual
hasScanNumbers() constpappso::MsRunReadervirtual
initialize() overridepappso::BafAsciiMsRunReaderprotectedvirtual
isMonoThread() constpappso::MsRunReader
m_fileNamepappso::BafAsciiMsRunReaderprotected
m_isMonoThreadpappso::MsRunReaderprivate
m_spectrumCountpappso::BafAsciiMsRunReadermutableprotected
massSpectrumCstSPtr(std::size_t spectrum_index) overridepappso::BafAsciiMsRunReadervirtual
massSpectrumSPtr(std::size_t spectrum_index) overridepappso::BafAsciiMsRunReadervirtual
mcsp_msRunIdpappso::MsRunReaderprotected
mpa_multiMapScanNumberpappso::MsRunReaderprotected
MsFileAccessorpappso::BafAsciiMsRunReaderfriend
MsRunReader(const MsRunIdCstSPtr &ms_run_id)pappso::MsRunReader
MsRunReader(const MsRunReader &other)pappso::MsRunReader
newXicCoordSPtrFromQualifiedMassSpectrum(const pappso::QualifiedMassSpectrum &mass_spectrum, pappso::PrecisionPtr precision) const overridepappso::BafAsciiMsRunReadervirtual
newXicCoordSPtrFromSpectrumIndex(std::size_t spectrum_index, pappso::PrecisionPtr precision) const overridepappso::BafAsciiMsRunReadervirtual
parseMassSpectrumLine(QString &line, MassSpectrumLineData &ms_line_data, QRegularExpression &line_regexp) constpappso::BafAsciiMsRunReaderprotected
qualifiedMassSpectrum(std::size_t spectrum_index, bool want_binary_data=true) const overridepappso::BafAsciiMsRunReadervirtual
qualifiedMassSpectrumFromBafAsciiMSDataFile(std::size_t spectrum_index, bool want_binary_data) constpappso::BafAsciiMsRunReaderprotected
readSpectrumCollection(SpectrumCollectionHandlerInterface &handler) overridepappso::BafAsciiMsRunReadervirtual
readSpectrumCollection2(const MsRunReadConfig &config, SpectrumCollectionHandlerInterface &handler) overridepappso::BafAsciiMsRunReadervirtual
readSpectrumCollectionByMsLevel(SpectrumCollectionHandlerInterface &handler, unsigned int ms_level) overridepappso::BafAsciiMsRunReadervirtual
releaseDevice() overridepappso::BafAsciiMsRunReadervirtual
scanNumber2SpectrumIndex(std::size_t scan_number)pappso::MsRunReadervirtual
setMonoThread(bool is_mono_thread)pappso::MsRunReader
spectrumListSize() const overridepappso::BafAsciiMsRunReadervirtual
~BafAsciiMsRunReader()pappso::BafAsciiMsRunReadervirtual
~MsRunReader()pappso::MsRunReadervirtual