sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-01.freexian.com
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| loki 2.4.7.4-10 (arm64) Sun, 17 Nov 2024 09:22:46 +0000 |
+==============================================================================+
Package: loki
Version: 2.4.7.4-10
Source Version: 2.4.7.4-10
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary
I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.CAvoqqcFV0...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'
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| Chroot Setup Commands |
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rm -f /etc/resolv.conf
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I: Finished running 'rm -f /etc/resolv.conf'.
Finished processing commands.
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Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-a3so3xwf/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/loki-NyLeYD/resolver-24hzJN' with '<<RESOLVERDIR>>'
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Get:1 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ InRelease
Ign:1 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ InRelease
Get:2 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ Release [606 B]
Get:4 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ Release.gpg
Ign:4 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ Release.gpg
Get:5 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ Packages [9246 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9952 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4909 kB]
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Reading package lists...
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Calculating upgrade...
The following packages will be upgraded:
apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
libsemanage2 libsmartcols1 libsystemd0 libudev1 libuuid1 libxml2 login
login.defs mount passwd util-linux
30 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 9274 kB/12.8 MB of archives.
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Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libsystemd0 arm64 257~rc2-3 [416 kB]
Get:6 file:/build/loki-NyLeYD/resolver-zeRya8/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libudev1 arm64 257~rc2-3 [139 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 login.defs all 1:4.16.0-5 [185 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 passwd arm64 1:4.16.0-5 [1210 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
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Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) over (2.12.7+dfsg+really2.9.14-0.1) ...
Setting up bsdextrautils (2.40.2-11) ...
Setting up login.defs (1:4.16.0-5) ...
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Setting up libglib2.0-0t64:arm64 (2.82.2-3) ...
No schema files found: doing nothing.
Setting up libdpkg-perl (1.22.12~1.gbp82cafd) ...
Setting up mount (2.40.2-11) ...
Setting up libsemanage2:arm64 (3.7-2+b1) ...
Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libmarkdown2:arm64 (2.2.7-2.1) ...
Setting up login (1:4.16.0-2+really2.40.2-11) ...
Setting up dpkg-dev (1.22.12~1.gbp82cafd) ...
Setting up passwd (1:4.16.0-5) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Local sources
-------------
/tmp/debusine-fetch-exec-upload-a3so3xwf/loki_2.4.7.4-10.dsc exists in /tmp/debusine-fetch-exec-upload-a3so3xwf; copying to chroot
I: NOTICE: Log filtering will replace 'build/loki-NyLeYD/loki-2.4.7.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/loki-NyLeYD' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 12), build-essential, fakeroot
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
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Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
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Get:3 file:/<<BUILDDIR>>/resolver-zeRya8/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-zeRya8/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-strip-nondeterminism dwz fakeroot g++ g++-14 g++-14-aarch64-linux-gnu
g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
gcc-aarch64-linux-gnu libasan8 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libhwasan0 libisl23 libitm1 liblsan0 libmpc3 libmpfr6
libstdc++-14-dev libtool libtsan2 libubsan1 linux-libc-dev m4 po-debconf
rpcsvc-proto
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc dh-make gcc-14-doc gcc-multilib manpages-dev flex bison gdb
gcc-doc gdb-aarch64-linux-gnu libc-devtools glibc-doc libstdc++-14-doc
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl
Recommended packages:
manpages manpages-dev libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-strip-nondeterminism dwz fakeroot g++ g++-14 g++-14-aarch64-linux-gnu
g++-aarch64-linux-gnu gcc gcc-14 gcc-14-aarch64-linux-gnu
gcc-aarch64-linux-gnu libasan8 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libhwasan0 libisl23 libitm1 liblsan0 libmpc3 libmpfr6
libstdc++-14-dev libtool libtsan2 libubsan1 linux-libc-dev m4 po-debconf
rpcsvc-proto sbuild-build-depends-main-dummy
0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded.
Need to get 61.0 MB of archives.
After this operation, 238 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [880 B]
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Get:3 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
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Get:15 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
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Get:17 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:18 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:19 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:28 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:30 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:31 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:33 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:35 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:36 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:37 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:38 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:42 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up fakeroot (1.36-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Setting up autotools-dev (20220109.1) ...
Setting up rpcsvc-proto (1.4.3-1+b1) ...
Setting up libmpfr6:arm64 (4.2.1-1+b2) ...
Setting up libmpc3:arm64 (1.3.1-1+b3) ...
Setting up autopoint (0.22.5-2) ...
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Setting up libubsan1:arm64 (14.2.0-8) ...
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Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up cpp-14-aarch64-linux-gnu (14.2.0-8) ...
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Setting up cpp (4:14.2.0-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-8) ...
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Setting up g++-14-aarch64-linux-gnu (14.2.0-8) ...
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Setting up dh-autoreconf (20) ...
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update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in any all)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
Package versions: appstream_1.0.3-1+b1 apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-aarch64-linux-gnu_14.2.0-8 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9+b1 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1+b1 diffutils_1:3.10-1+b1 dpkg_1.22.12~1.gbp82cafd dpkg-dev_1.22.12~1.gbp82cafd dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-aarch64-linux-gnu_14.2.0-8 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 gcc-14-aarch64-linux-gnu_14.2.0-8 gcc-14-base_14.2.0-8 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libfile-listing-perl_6.16-1 libfile-sharedir-perl_1.118-3 libfile-stripnondeterminism-perl_1.14.0-1 libfont-ttf-perl_1.06-2 libgcc-14-dev_14.2.0-8 libgcc-s1_14.2.0-8 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libglib2.0-0t64_2.82.2-3 libgmp10_2:6.3.0+dfsg-2+b2 libgnutls30t64_3.8.8-2 libgomp1_14.2.0-8 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgssapi-krb5-2_1.21.3-3 libhogweed6t64_3.10-1+b1 libhtml-form-perl_6.12-1 libhtml-html5-entities-perl_0.004-3 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tokeparser-simple-perl_3.16-4 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_7.00-2 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-8 libicu72_72.1-5+b1 libidn2-0_2.3.7-2+b1 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-interactive-perl_1.025-1 libio-socket-ssl-perl_2.089-1 libio-string-perl_1.08-4 libipc-run3-perl_0.049-1 libipc-system-simple-perl_1.30-2 libisl23_0.27-1 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libnetaddr-ip-perl_4.079+dfsg-2+b4 libnettle8t64_3.10-1+b1 libnghttp2-14_1.64.0-1 libnghttp3-9_1.4.0-1+b1 libngtcp2-16_1.6.0-1 libngtcp2-crypto-gnutls8_1.6.0-1 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.5-2+b1 libpackage-stash-perl_0.40-1 libpam-modules_1.5.3-7+b1 libpam-modules-bin_1.5.3-7+b1 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7+b1 libparams-classify-perl_0.015-2+b4 libparams-util-perl_1.102-3+b1 libpath-tiny-perl_0.146-1 libpcre2-8-0_10.44-4 libperl5.40_5.40.0-7 libperlio-gzip-perl_0.20-1+b4 libperlio-utf8-strict-perl_0.010-1+b3 libpipeline1_1.5.8-1 libproc-processtable-perl_0.636-1+b3 libpsl5t64_0.21.2-1.1+b1 libreadline8t64_8.2-5 libregexp-wildcards-perl_1.05-3 librole-tiny-perl_2.002004-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b5 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b3 libselinux1_3.7-3+b1 libsemanage-common_3.7-2 libsemanage2_3.7-2+b1 libsepol2_3.7-1 libsereal-decoder-perl_5.004+ds-1+b3 libsereal-encoder-perl_5.004+ds-1+b3 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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: loki
Binary: loki, loki-doc
Architecture: any all
Version: 2.4.7.4-10
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/loki
Vcs-Git: https://salsa.debian.org/med-team/loki.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 12)
Package-List:
loki deb science optional arch=any
loki-doc deb doc optional arch=all
Checksums-Sha1:
ce7d6ff3ca6159c329ca0f5f6ed633bf265acd33 904260 loki_2.4.7.4.orig.tar.gz
36d1dd1af418942f735e7691ff0562d79e738d19 29080 loki_2.4.7.4-10.debian.tar.xz
Checksums-Sha256:
78bc51f47fb756fcdc9ab55bc4c7dd649ee87aaa6bd9be87eac44e4a8eac9eb5 904260 loki_2.4.7.4.orig.tar.gz
cc666373faa439b9c1a485904797aa4353829743a92581ab41943498ba6b3f5b 29080 loki_2.4.7.4-10.debian.tar.xz
Files:
7764c55d3c3a33584a6f92740210b677 904260 loki_2.4.7.4.orig.tar.gz
707ea1abf958fbd5a98536a5dfdc9f53 29080 loki_2.4.7.4-10.debian.tar.xz
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gpgv: Signature made Mon Feb 24 07:26:03 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./loki_2.4.7.4-10.dsc: no acceptable signature found
dpkg-source: info: extracting loki in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking loki_2.4.7.4.orig.tar.gz
dpkg-source: info: unpacking loki_2.4.7.4-10.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 10_utils.patch
dpkg-source: info: applying 10_lex.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying spelling.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package loki
dpkg-buildpackage: info: source version 2.4.7.4-10
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
debian/rules clean
dh clean
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
autoreconf: warning: autoconf input should be named 'configure.ac', not 'configure.in'
aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in'
configure.in:4: warning: The macro 'AC_CONFIG_HEADER' is obsolete.
configure.in:4: You should run autoupdate.
./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from...
configure.in:4: the top level
configure.in:40: warning: AC_PROG_LEX without either yywrap or noyywrap is obsolete
./lib/autoconf/programs.m4:743: _AC_PROG_LEX is expanded from...
./lib/autoconf/programs.m4:736: AC_PROG_LEX is expanded from...
configure.in:40: the top level
configure.in:57: warning: The macro 'AC_HEADER_STDC' is obsolete.
configure.in:57: You should run autoupdate.
./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from...
configure.in:57: the top level
configure.in:111: warning: AC_OUTPUT should be used without arguments.
configure.in:111: You should run autoupdate.
autoheader: warning: autoconf input should be named 'configure.ac', not 'configure.in'
debian/rules override_dh_auto_configure-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- --exec_prefix=/<<PKGBUILDDIR>>/debian/loki/usr
./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --exec_prefix=/<<PKGBUILDDIR>>/debian/loki/usr
checking whether make sets $(MAKE)... yes
checking for DMALLOC library
Looking for dmalloc.h in ${prefix}/include and libdmalloc.a in ${prefix}/lib/aarch64-linux-gnu
Looking for dmalloc.h in /usr/local/include and libdmalloc.a in /usr/local/lib
Looking for dmalloc.h in /usr/include and libdmalloc.a in /usr/lib
Looking for dmalloc.h in /sbuild-nonexistent/include and libdmalloc.a in /sbuild-nonexistent/lib
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking for flex... no
checking for lex... no
checking for bison... no
checking for byacc... no
checking for ranlib... /usr/bin/ranlib
checking for ar... /usr/bin/ar
checking for sed... /usr/bin/sed
checking for cp... /usr/bin/cp
checking for grep... /usr/bin/grep
checking for mv... /usr/bin/mv
checking for gzip... /usr/bin/gzip
checking for chmod... /usr/bin/chmod
checking for perl... /usr/bin/perl
checking for makedepend... :
checking for sin in -lm... yes
checking for accept in -lsocket... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for fcntl.h... yes
checking for limits.h... yes
checking for values.h... yes
checking for unistd.h... (cached) yes
checking for sys/systeminfo.h... no
checking for mode_t... yes
checking for off_t... yes
checking for pid_t... yes
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for socklen_t...
no
checking for an ANSI C-conforming const... yes
checking for vprintf... yes
checking for memcpy... yes
checking for regcomp... yes
checking for strtod... yes
checking for strtol... yes
checking for gethostname... yes
checking for popen... yes
checking for snprintf... yes
checking for atexit... yes
checking for memmove... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libsrc/Makefile
config.status: creating prepsrc/Makefile
config.status: creating prepsrc/compat/Makefile
config.status: creating lokisrc/Makefile
config.status: creating test/Makefile
config.status: creating utils/Makefile
config.status: creating include/config.h
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_configure-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# do nothing here
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# nothing to do here
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -Nloki-doc
make -j8
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for subdir in libsrc prepsrc lokisrc utils; do \
(cd $subdir; make depend) \
done
make[2]: Entering directory '/<<PKGBUILDDIR>>/libsrc'
: -I../include/ io_stuff.c ranlib.c genrand.c ran_xtra.c mkbackup.c strsep.c utils.c remember.c peel_utils.c qsort.c min_deg.c bin_tree.c getopt_long.c
touch depend
make[2]: Leaving directory '/<<PKGBUILDDIR>>/libsrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
: -I../include control_parse.c control_lex.c check_het.c test_het.c prep.c calc_nrm.c write_report.c prep_utils.c gen_elim.c prep_do_peel_op.c write_data.c
touch depend
make[2]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
: -I../include loki.c loki_peel.c loki_init.c alloc_loki.c loki_sample.c loki_pen.c loki_tlmoves.c meiosis_scan.c loki_identity.c sample_rand.c sample_effects.c loki_setup.c loki_dump.c sample_cens.c handle_res.c print_data.c calc_var_locus.c loki_output.c sample_nu.c loki_complex_peel.c loki_npl.c loki_simple_sample.c loki_simple_peel.c loki_trait_simple_peel.c loki_trait_simple_sample.c get_par_probs.c read_solar_idfile.c peel_to_par.c update_segs.c param_parse.c param_lex.c read_binfiles.c loki_utils.c kinship.c genedrop.c mat_utils.c output_recomb.c seg_pen.c gen_pen.c loki_ibd.c get_founders.c pass_founder_genes.c
touch depend
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/utils'
: -I../include qavg.c hist.c
touch depend
make[2]: Leaving directory '/<<PKGBUILDDIR>>/utils'
touch depend
for subdir in libsrc prepsrc lokisrc utils; do \
(cd $subdir; make) \
done
make[2]: Entering directory '/<<PKGBUILDDIR>>/libsrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o io_stuff.o io_stuff.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ranlib.o ranlib.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o genrand.o genrand.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ran_xtra.o ran_xtra.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mkbackup.o mkbackup.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o strsep.o strsep.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o utils.o utils.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o remember.o remember.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o peel_utils.o peel_utils.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qsort.o qsort.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o min_deg.o min_deg.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bin_tree.o bin_tree.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o getopt_long.o getopt_long.c
/usr/bin/ar cr libgen.a io_stuff.o ranlib.o genrand.o ran_xtra.o mkbackup.o strsep.o utils.o remember.o peel_utils.o qsort.o min_deg.o bin_tree.o getopt_long.o
/usr/bin/ranlib libgen.a
make[2]: Leaving directory '/<<PKGBUILDDIR>>/libsrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o control_parse.o control_parse.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o control_lex.o control_lex.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_data.o read_data.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o setup_ped.o setup_ped.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o recode_fact.o recode_fact.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cleanup.o cleanup.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restrict_data.o restrict_data.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o match_records.o match_records.c
setup_ped.c: In function ‘setup_pedigree’:
setup_ped.c:426:83: warning: this statement may fall through [-Wimplicit-fallthrough=]
426 | if(i!=id) {
| ^
setup_ped.c:430:74: note: here
430 | default:
| ^~~~~~~
lex.yy.c:2062:12: warning: ‘input’ defined but not used [-Wunused-function]
setup_ped.c: In function ‘check_ymark’:
setup_ped.c:1135:42: warning: pointer ‘list’ may be used after ‘free’ [-Wuse-after-free]
1135 | if(pl->type==LINK_Y) list[ny++]=locus;
| ^
setup_ped.c:1127:9: note: call to ‘free’ here
1127 | free(list);
| ^~~~~~~~~~
setup_ped.c:1141:17: warning: pointer ‘list’ may be used after ‘free’ [-Wuse-after-free]
1141 | do_yprint(i,list,ny);
| ^~~~~~~~~~~~~~~~~~~~
setup_ped.c:1127:9: note: call to ‘free’ here
1127 | free(list);
| ^~~~~~~~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o init_fam.o init_fam.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o output_data.o output_data.c
control_lex.l: In function ‘yy_orig_lex’:
control_lex.l:106:11: warning: ‘__builtin_strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
106 | (void)strncpy(linebuf,yytext+1,LINEBUFSIZE);
| ^
control_lex.l:95:11: warning: ‘__builtin_strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
95 | (void)strncpy(linebuf,yytext,LINEBUFSIZE);
| ^
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_marker_name.o get_marker_name.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep.o prep.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o calc_nrm.o calc_nrm.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o write_report.o write_report.c
write_report.c: In function ‘WriteReport’:
write_report.c:286:28: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses]
286 | if(!elem->type&(ST_MODEL|ST_TRAIT)) continue;
| ^~~~~~~~~~~
write_report.c:300:28: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses]
300 | if(!elem->type&(ST_MODEL|ST_TRAIT)) continue;
| ^~~~~~~~~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep_utils.o prep_utils.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gen_elim.o gen_elim.c
gen_elim.c: In function ‘min_degree’:
gen_elim.c:1075:31: warning: variable ‘best_fg’ set but not used [-Wunused-but-set-variable]
1075 | int x,i1,k1,k2,*trans,best_fg=0;
| ^~~~~~~
gen_elim.c: In function ‘find_sequence’:
gen_elim.c:1156:24: warning: variable ‘mark’ set but not used [-Wunused-but-set-variable]
1156 | struct Marker *mark;
| ^~~~
gen_elim.c:1155:31: warning: variable ‘order1’ set but not used [-Wunused-but-set-variable]
1155 | int *g_perm,*order=0,*order1;
| ^~~~~~
gen_elim.c: In function ‘logical_peel’:
gen_elim.c:1268:24: warning: variable ‘mark’ set but not used [-Wunused-but-set-variable]
1268 | struct Marker *mark;
| ^~~~
gen_elim.c:1266:34: warning: variable ‘pp1’ set but not used [-Wunused-but-set-variable]
1266 | struct Peelseq_Head *pp,*pp1;
| ^~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep_do_peel_op.o prep_do_peel_op.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o write_data.o write_data.c
prep_do_peel_op.c: In function ‘do_peel_op’:
prep_do_peel_op.c:238:26: warning: variable ‘fill’ set but not used [-Wunused-but-set-variable]
238 | double max_terms,fill;
| ^~~~
/usr/bin/ar cr libprep.a control_parse.o control_lex.o read_data.o setup_ped.o recode_fact.o cleanup.o restrict_data.o match_records.o init_fam.o output_data.o get_marker_name.o
/usr/bin/ranlib libprep.a
(cd compat; make)
make[3]: Entering directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../../include -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compat.o compat.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../../include -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o merlin.o merlin.c
merlin.c: In function ‘process_qtdt’:
merlin.c:59:60: warning: parameter ‘error_check’ set but not used [-Wunused-but-set-parameter]
59 | int process_qtdt(int argc,char *argv[],char **LogFile,int *error_check,loki_time *lt)
| ~~~~~^~~~~~~~~~~
merlin.c:162:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
162 | nmark++;
| ~~~~~^~
merlin.c:163:26: note: here
163 | case 'A':
| ^~~~
/usr/bin/ar cr libcompat.a compat.o merlin.o
/usr/bin/ranlib libcompat.a
make[3]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/./prepsrc/compat/merlin.c:41: multiple definition of `strip_vars'; prep.o:./prepsrc/./prepsrc/prep.c:43: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:51: prep] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o param_parse.o param_parse.c
gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -DYY_NO_UNPUT param_lex.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_binfiles.o read_binfiles.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_utils.o loki_utils.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kinship.o kinship.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o genedrop.o genedrop.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mat_utils.o mat_utils.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o output_recomb.o output_recomb.c
param_lex.c: In function ‘yy_get_next_buffer’:
param_lex.c:641:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
641 | for ( n = 0; n < max_size && \
| ^
param_lex.c:1161:17: note: in expansion of macro ‘YY_INPUT’
1161 | YY_INPUT( (&YY_CURRENT_BUFFER_LVALUE->yy_ch_buf[number_to_move]),
| ^~~~~~~~
param_lex.c: At top level:
param_lex.c:1301:16: warning: ‘input’ defined but not used [-Wunused-function]
1301 | static int input (void)
| ^~~~~
param_lex.c:1260:17: warning: ‘yyunput’ defined but not used [-Wunused-function]
1260 | static void yyunput (int c, register char * yy_bp )
| ^~~~~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seg_pen.o seg_pen.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gen_pen.o gen_pen.c
gen_pen.c: In function ‘calc_degree’:
gen_pen.c:321:31: warning: variable ‘k2’ set but not used [-Wunused-but-set-variable]
321 | int i1,j,j1,j2,k=0,k1,k2;
| ^~
gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -DIBD_COMPRESS_PROG=\"/usr/bin/gzip\" loki_ibd.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_founders.o get_founders.c
loki_ibd.c: In function ‘SetupIBD’:
loki_ibd.c:215:102: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long unsigned int’ [-Wformat=]
215 | fprintf(stderr,"Asked for 2*n_locations*n_pairs*sizeof(int)=2*%d*%d*%d=%d bytes\n",j,np,sizeof(int),2*j*np*sizeof(int));
| ~^ ~~~~~~~~~~~
| | |
| int long unsigned int
| %ld
loki_ibd.c:215:105: warning: format ‘%d’ expects argument of type ‘int’, but argument 6 has type ‘long unsigned int’ [-Wformat=]
215 | fprintf(stderr,"Asked for 2*n_locations*n_pairs*sizeof(int)=2*%d*%d*%d=%d bytes\n",j,np,sizeof(int),2*j*np*sizeof(int));
| ~^ ~~~~~~~~~~~~~~~~~~
| | |
| int long unsigned int
| %ld
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pass_founder_genes.o pass_founder_genes.c
param_lex.l: In function ‘yylex’:
param_lex.l:91:11: warning: ‘strncpy’ specified bound 512 equals destination size [-Wstringop-truncation]
91 | (void)strncpy(linebuf,yytext+1,512);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
param_lex.l:64:11: warning: ‘strncpy’ specified bound 512 equals destination size [-Wstringop-truncation]
64 | (void)strncpy(linebuf,yytext,512);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
pass_founder_genes.c: In function ‘pass_founder_genes’:
pass_founder_genes.c:35:47: warning: variable ‘locus1’ set but not used [-Wunused-but-set-variable]
35 | int i,i1,j,s,**genes,**seg,comp,cs,nc,locus1;
| ^~~~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki.o loki.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_peel.o loki_peel.c
pass_founder_genes.c: In function ‘pass_founder_genes2’:
pass_founder_genes.c:447:44: warning: ‘g[0]’ may be used uninitialized [-Wmaybe-uninitialized]
447 | for(s=0;s<2;s++) if(genes[s][i]!=g[s]) {
| ^
pass_founder_genes.c:426:32: note: ‘g[0]’ was declared here
426 | int i,i1,j,k,s,**genes,g[2],fg=0,*hap;
| ^
pass_founder_genes.c:447:44: warning: ‘g[1]’ may be used uninitialized [-Wmaybe-uninitialized]
447 | for(s=0;s<2;s++) if(genes[s][i]!=g[s]) {
| ^
pass_founder_genes.c:426:32: note: ‘g[1]’ was declared here
426 | int i,i1,j,k,s,**genes,g[2],fg=0,*hap;
| ^
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_init.o loki_init.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o alloc_loki.o alloc_loki.c
loki_init.c: In function ‘InitValues’:
loki_init.c:125:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
125 | tau_beta[mod]*=residual_var[mod];
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
loki_init.c:126:18: note: here
126 | case 1:
| ^~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_sample.o loki_sample.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_pen.o loki_pen.c
loki_peel.c: In function ‘peel_locus’:
loki_peel.c:427:43: warning: ‘z’ may be used uninitialized [-Wmaybe-uninitialized]
427 | if(z== -DBL_MAX) {
| ^
loki_peel.c:145:26: note: ‘z’ was declared here
145 | double like=0.0,like1,z,z1,theta,Mtp[2],Ptp[2],*pos,*eff,**count,*tpp,*freq1,*count1;
| ^
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_tlmoves.o loki_tlmoves.c
loki_tlmoves.c: In function ‘sample_mpos’:
loki_tlmoves.c:152:36: warning: variable ‘idd’ set but not used [-Wunused-but-set-variable]
152 | int i,j,locus,k2=-1,k3,ids,idd,sx,**seg,s,s1;
| ^~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o meiosis_scan.o meiosis_scan.c
meiosis_scan.c: In function ‘meiosis_scan’:
meiosis_scan.c:162:76: warning: variable ‘n_comp1’ set but not used [-Wunused-but-set-variable]
162 | int sex,kid,**seg,**seg1,kid1,nkids1,*kids1,lffg,symflag,n_qtl,qtl,n_comp1;
| ^~~~~~~
loki_tlmoves.c:210:61: warning: ‘x’ may be used uninitialized [-Wmaybe-uninitialized]
210 | r=.5*(1.0-exp(.02*(x-x1)));
| ~~^~~~
loki_tlmoves.c:153:48: note: ‘x’ was declared here
153 | double pp[2][50],ct1[2][50],ct2[2][50],x,x1,r,z,z1;
| ^
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_identity.o loki_identity.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_rand.o sample_rand.c
loki_tlmoves.c: In function ‘get_tl_position’:
loki_tlmoves.c:623:17: warning: ‘z’ may be used uninitialized [-Wmaybe-uninitialized]
623 | prior[i]+=z;
| ^~
loki_tlmoves.c:606:16: note: ‘z’ was declared here
606 | double z,z1,z2,map_length;
| ^
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_effects.o sample_effects.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_setup.o loki_setup.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_dump.o loki_dump.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_cens.o sample_cens.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o handle_res.o handle_res.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o print_data.o print_data.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o calc_var_locus.o calc_var_locus.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_output.o loki_output.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_nu.o sample_nu.c
loki_output.c: In function ‘OutputSample’:
loki_output.c:345:17: warning: this statement may fall through [-Wimplicit-fallthrough=]
345 | OutputSample_2(fptr,lp);
| ^~~~~~~~~~~~~~~~~~~~~~~
loki_output.c:346:10: note: here
346 | case OUTPUT_VERSION_2_3:
| ^~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_complex_peel.o loki_complex_peel.c
loki_complex_peel.c: In function ‘loki_complex_peelop’:
loki_complex_peel.c:458:169: warning: format ‘%d’ expects argument of type ‘int’, but argument 8 has type ‘long unsigned int’ [-Wformat=]
458 | (void)fprintf(stderr,"\nToo many individuals in output R-Function for marker %s\nn_peel = %d, n_all = %d, n_bits1 = %d, required size = %d, LONG_BIT = %d\n",marker[locus].name,n_peel,n_all,n_bits1,n_peel*n_bits1,LK_LONG_BIT);
| ~^
| |
| int
| %ld
loki_complex_peel.c:379:16: warning: variable ‘max_terms’ set but not used [-Wunused-but-set-variable]
379 | double max_terms,*tp,prob=0.0,z,p1,Konst=0.0;
| ^~~~~~~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_npl.o loki_npl.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_simple_sample.o loki_simple_sample.c
loki_simple_sample.c: In function ‘loki_simple_sample’:
loki_simple_sample.c:25:58: warning: variable ‘tpp2’ set but not used [-Wunused-but-set-variable]
25 | double *tp,p1,p2,z,z1,prob=0.0,pp[4],*tmp,*tpp1,*tpp2;
| ^~~~
loki_simple_sample.c:25:52: warning: variable ‘tpp1’ set but not used [-Wunused-but-set-variable]
25 | double *tp,p1,p2,z,z1,prob=0.0,pp[4],*tmp,*tpp1,*tpp2;
| ^~~~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_simple_peel.o loki_simple_peel.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_trait_simple_peel.o loki_trait_simple_peel.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_trait_simple_sample.o loki_trait_simple_sample.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_par_probs.o get_par_probs.c
loki_simple_peel.c: In function ‘loki_simple_peelop’:
loki_simple_peel.c:601:54: warning: ‘cm[0]’ may be used uninitialized [-Wmaybe-uninitialized]
601 | id_set2[i]=(cm[X_MAT]&a1)?lump[X_MAT]:i;
| ~~~~~~~~~~^~~~
loki_simple_peel.c:27:28: note: ‘cm[0]’ was declared here
27 | lk_ulong a,b,a1,b1,cm[2],*tmp_idx,*tmp_idx1,*cmm[2],mask;
| ^~
loki_simple_peel.c:600:54: warning: ‘cm[1]’ may be used uninitialized [-Wmaybe-uninitialized]
600 | id_set1[i]=(cm[X_PAT]&a1)?l:i1;
| ~~~~~~~~~~^~~~
loki_simple_peel.c:27:28: note: ‘cm[1]’ was declared here
27 | lk_ulong a,b,a1,b1,cm[2],*tmp_idx,*tmp_idx1,*cmm[2],mask;
| ^~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_solar_idfile.o read_solar_idfile.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o peel_to_par.o peel_to_par.c
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o update_segs.o update_segs.c
/usr/bin/ar cr libloki.a param_parse.o param_lex.o read_binfiles.o loki_utils.o kinship.o genedrop.o mat_utils.o output_recomb.o seg_pen.o gen_pen.o loki_ibd.o get_founders.o pass_founder_genes.o
/usr/bin/ranlib libloki.a
loki_simple_peel.c: In function ‘loki_simple_peelop_x’:
loki_simple_peel.c:1279:54: warning: ‘cm[0]’ may be used uninitialized [-Wmaybe-uninitialized]
1279 | id_set2[i]=(cm[X_MAT]&a1)?lump[X_MAT]:i;
| ~~~~~~~~~~^~~~
loki_simple_peel.c:723:28: note: ‘cm[0]’ was declared here
723 | lk_ulong a,b,a1,b1,cm[2],*tmp_idx,*tmp_idx1,*cmm[2],mask;
| ^~
loki_simple_peel.c:1278:54: warning: ‘cm[1]’ may be used uninitialized [-Wmaybe-uninitialized]
1278 | id_set1[i]=(cm[X_PAT]&a1)?l:i1;
| ~~~~~~~~~~^~~~
loki_simple_peel.c:723:28: note: ‘cm[1]’ was declared here
723 | lk_ulong a,b,a1,b1,cm[2],*tmp_idx,*tmp_idx1,*cmm[2],mask;
| ^~
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lloki -lgen -lm
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:70: loki] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/utils'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o qavg qavg.c -Wl,-z,relro -Wl,-z,now -lm
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o hist hist.c -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/<<PKGBUILDDIR>>/utils'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd test; if [ -f Makefile ] ; then make ; fi
make[2]: Entering directory '/<<PKGBUILDDIR>>/test'
/usr/bin/sed s+SED+/usr/bin/sed+g loki_test.in|/usr/bin/sed s+PREP+../prepsrc/prep+g|\
/usr/bin/sed s+LOKI+../lokisrc/loki+g|/usr/bin/sed s+GREP+/usr/bin/grep+g > tmp
cp tmp loki_test && chmod 755 loki_test
/usr/bin/sed s+COMPRESS+/usr/bin/gzip+g control_gaw9.in > tmp
cp tmp control_gaw9
JV test 1 ... Failed
JV test 2 ... Failed
JV censored data test ... Failed
LM sample test ... Failed
Major gene test ... Failed
GAW9 test ... Failed
JV restart test ... Failed
make[2]: Leaving directory '/<<PKGBUILDDIR>>/test'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -Nloki
create-stamp debian/debhelper-build-stamp
dh_prep
dh_installdirs
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -a
make -j8 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<PKGBUILDDIR>>'
for subdir in libsrc prepsrc lokisrc utils; do \
(cd $subdir; make) \
done
make[3]: Entering directory '/<<PKGBUILDDIR>>/libsrc'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/libsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
(cd compat; make)
make[4]: Entering directory '/<<PKGBUILDDIR>>/prepsrc/compat'
make[4]: 'libcompat.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/./prepsrc/compat/merlin.c:41: multiple definition of `strip_vars'; prep.o:./prepsrc/./prepsrc/prep.c:43: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:51: prep] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lloki -lgen -lm
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:70: loki] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/utils'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/utils'
for subdir in prepsrc lokisrc utils; do \
(cd $subdir; make install) \
done
make[3]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
(cd compat; make)
mkdir ../bin
make[4]: Entering directory '/<<PKGBUILDDIR>>/prepsrc/compat'
make[4]: 'libcompat.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/./prepsrc/compat/merlin.c:41: multiple definition of `strip_vars'; prep.o:./prepsrc/./prepsrc/prep.c:43: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:51: prep] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lloki -lgen -lm
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:70: loki] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/utils'
for file in ext count dist freq sort_error; do \
/usr/bin/sed 's!+PERLPROG+!/usr/bin/perl!' $file.in > /<<PKGBUILDDIR>>/debian/loki/usr/bin/loki_$file; \
/usr/bin/chmod 755 /<<PKGBUILDDIR>>/debian/loki/usr/bin/loki_$file; \
done
for file in qavg hist; do \
/usr/bin/cp $file /<<PKGBUILDDIR>>/debian/loki/usr/bin/; \
/usr/bin/chmod 755 /<<PKGBUILDDIR>>/debian/loki/usr/bin/$file ; \
done
make[3]: Leaving directory '/<<PKGBUILDDIR>>/utils'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make install prefix=/<<PKGBUILDDIR>>/debian/loki/usr bindir=/<<PKGBUILDDIR>>/debian/loki/usr/bin LDFLAGS="-Wl,-z,relro -Wl,-z,now"
make[2]: Entering directory '/<<PKGBUILDDIR>>'
for subdir in libsrc prepsrc lokisrc utils; do \
(cd $subdir; make) \
done
make[3]: Entering directory '/<<PKGBUILDDIR>>/libsrc'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/libsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
(cd compat; make)
make[4]: Entering directory '/<<PKGBUILDDIR>>/prepsrc/compat'
make[4]: 'libcompat.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/./prepsrc/compat/merlin.c:41: multiple definition of `strip_vars'; prep.o:./prepsrc/./prepsrc/prep.c:43: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:51: prep] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lloki -lgen -lm
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:70: loki] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/utils'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/utils'
for subdir in prepsrc lokisrc utils; do \
(cd $subdir; make install) \
done
make[3]: Entering directory '/<<PKGBUILDDIR>>/prepsrc'
(cd compat; make)
make[4]: Entering directory '/<<PKGBUILDDIR>>/prepsrc/compat'
make[4]: 'libcompat.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc/compat'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_nrm.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_report.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_utils.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: gen_elim.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: prep_do_peel_op.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: write_data.o:./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_parse.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(control_lex.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(read_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(setup_ped.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(recode_fact.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(cleanup.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(restrict_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(match_records.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(init_fam.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(output_data.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libprep.a(get_marker_name.o):./prepsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(compat.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/./prepsrc/compat/merlin.c:41: multiple definition of `strip_vars'; prep.o:./prepsrc/./prepsrc/prep.c:43: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:32: multiple definition of `from_abt'; prep.o:./prepsrc/../include/utils.h:32: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `AbMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `MMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `IntErr'; prep.o:./prepsrc/../include/utils.h:31: first defined here
/usr/bin/ld: compat/libcompat.a(merlin.o):./prepsrc/compat/../../include/utils.h:31: multiple definition of `FMsg'; prep.o:./prepsrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:51: prep] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/prepsrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/lokisrc'
gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-z,relro -Wl,-z,now -L. -L../libsrc -lloki -lgen -lm
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_init.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: alloc_loki.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_pen.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_tlmoves.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: meiosis_scan.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_identity.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_rand.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_effects.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_setup.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_dump.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_cens.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: handle_res.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: print_data.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: calc_var_locus.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_output.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: sample_nu.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_complex_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_npl.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_peel.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: loki_trait_simple_sample.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: get_par_probs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: read_solar_idfile.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: peel_to_par.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: update_segs.o:./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_parse.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(param_lex.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(read_binfiles.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_utils.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(kinship.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(genedrop.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(output_recomb.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(seg_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(gen_pen.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(loki_ibd.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(get_founders.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ./libloki.a(pass_founder_genes.o):./lokisrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(genrand.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(utils.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(remember.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:32: multiple definition of `from_abt'; loki.o:./lokisrc/../include/utils.h:32: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `AbMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `MMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `IntErr'; loki.o:./lokisrc/../include/utils.h:31: first defined here
/usr/bin/ld: ../libsrc/libgen.a(min_deg.o):./libsrc/../include/utils.h:31: multiple definition of `FMsg'; loki.o:./lokisrc/../include/utils.h:31: first defined here
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:70: loki] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lokisrc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/utils'
for file in ext count dist freq sort_error; do \
/usr/bin/sed 's!+PERLPROG+!/usr/bin/perl!' $file.in > /<<PKGBUILDDIR>>/debian/loki/usr/bin/loki_$file; \
/usr/bin/chmod 755 /<<PKGBUILDDIR>>/debian/loki/usr/bin/loki_$file; \
done
for file in qavg hist; do \
/usr/bin/cp $file /<<PKGBUILDDIR>>/debian/loki/usr/bin/; \
/usr/bin/chmod 755 /<<PKGBUILDDIR>>/debian/loki/usr/bin/$file ; \
done
make[3]: Leaving directory '/<<PKGBUILDDIR>>/utils'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_install-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# nothing to do here
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs
dh_installchangelogs
dh_installexamples
debian/rules override_dh_installman-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installman -a
for man in hist.1 loki_count.1 loki_dist.1 loki_ext.1 loki_freq.1 loki_sort_error.1 prep.1 qavg.1 ; do \
ln -s loki.1.gz debian/loki/usr/share/man/man1/${man}.gz ; \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installman -Nloki
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_dwz
dh_strip
dh_makeshlibs
dh_shlibdeps
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: package loki: substitution variable ${perl:Depends} unused, but is defined
dpkg-gencontrol: warning: package loki: substitution variable ${perl:Depends} unused, but is defined
dh_md5sums
dh_builddeb
dpkg-deb: building package 'loki' in '../loki_2.4.7.4-10_arm64.deb'.
dpkg-deb: building package 'loki-dbgsym' in '../loki-dbgsym_2.4.7.4-10_arm64.deb'.
dpkg-deb: building package 'loki-doc' in '../loki-doc_2.4.7.4-10_all.deb'.
dpkg-genbuildinfo --build=binary -O../loki_2.4.7.4-10_arm64.buildinfo
dpkg-genchanges --build=binary -O../loki_2.4.7.4-10_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-17T09:24:12Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
loki_2.4.7.4-10_arm64.changes:
------------------------------
Format: 1.8
Date: Mon, 24 Feb 2020 08:22:52 +0100
Source: loki
Binary: loki loki-dbgsym loki-doc
Architecture: arm64 all
Version: 2.4.7.4-10
Distribution: sid
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
loki - MCMC linkage analysis on general pedigrees
loki-doc - MCMC linkage analysis on general pedigrees (PS manual)
Changes:
loki (2.4.7.4-10) unstable; urgency=medium
.
* Define test for architecture any only
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Files:
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b9c0bcf4d108a73c5a4506d7d4084d04 224236 doc optional loki-doc_2.4.7.4-10_all.deb
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+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: loki
Binary: loki loki-dbgsym loki-doc
Architecture: all arm64
Version: 2.4.7.4-10
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Checksums-Sha256:
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Sun, 17 Nov 2024 09:24:11 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
autoconf (= 2.72-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.22.5-2),
autotools-dev (= 20220109.1),
base-files (= 13.5),
base-passwd (= 3.6.5),
bash (= 5.2.32-1+b2),
binutils (= 2.43.1-5),
binutils-aarch64-linux-gnu (= 2.43.1-5),
binutils-common (= 2.43.1-5),
bsdextrautils (= 2.40.2-11),
bsdutils (= 1:2.40.2-11),
build-essential (= 12.12),
bzip2 (= 1.0.8-6),
coreutils (= 9.5-1+b1),
cpp (= 4:14.2.0-1),
cpp-14 (= 14.2.0-8),
cpp-14-aarch64-linux-gnu (= 14.2.0-8),
cpp-aarch64-linux-gnu (= 4:14.2.0-1),
dash (= 0.5.12-9+b1),
debconf (= 1.5.87),
debhelper (= 13.20),
debianutils (= 5.21),
dh-autoreconf (= 20),
dh-strip-nondeterminism (= 1.14.0-1),
diffutils (= 1:3.10-1+b1),
dpkg (= 1.22.12~1.gbp82cafd),
dpkg-dev (= 1.22.12~1.gbp82cafd),
dwz (= 0.15-1+b1),
file (= 1:5.45-3+b1),
findutils (= 4.10.0-3),
g++ (= 4:14.2.0-1),
g++-14 (= 14.2.0-8),
g++-14-aarch64-linux-gnu (= 14.2.0-8),
g++-aarch64-linux-gnu (= 4:14.2.0-1),
gcc (= 4:14.2.0-1),
gcc-14 (= 14.2.0-8),
gcc-14-aarch64-linux-gnu (= 14.2.0-8),
gcc-14-base (= 14.2.0-8),
gcc-aarch64-linux-gnu (= 4:14.2.0-1),
gettext (= 0.22.5-2),
gettext-base (= 0.22.5-2),
grep (= 3.11-4+b1),
groff-base (= 1.23.0-5),
gzip (= 1.12-1.1+b1),
hostname (= 3.25),
init-system-helpers (= 1.67),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.2-2+b1),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 14.2.0-8),
libatomic1 (= 14.2.0-8),
libattr1 (= 1:2.5.2-2),
libaudit-common (= 1:4.0.2-2),
libaudit1 (= 1:4.0.2-2),
libbinutils (= 2.43.1-5),
libblkid1 (= 2.40.2-11),
libbz2-1.0 (= 1.0.8-6),
libc-bin (= 2.40-3),
libc-dev-bin (= 2.40-3),
libc6 (= 2.40-3),
libc6-dev (= 2.40-3),
libcap-ng0 (= 0.8.5-3+b1),
libcap2 (= 1:2.66-5+b1),
libcc1-0 (= 14.2.0-8),
libcrypt-dev (= 1:4.4.36-5),
libcrypt1 (= 1:4.4.36-5),
libctf-nobfd0 (= 2.43.1-5),
libctf0 (= 2.43.1-5),
libdb5.3t64 (= 5.3.28+dfsg2-9),
libdebconfclient0 (= 0.273),
libdebhelper-perl (= 13.20),
libdpkg-perl (= 1.22.12~1.gbp82cafd),
libelf1t64 (= 0.192-4),
libfile-stripnondeterminism-perl (= 1.14.0-1),
libgcc-14-dev (= 14.2.0-8),
libgcc-s1 (= 14.2.0-8),
libgdbm-compat4t64 (= 1.24-2),
libgdbm6t64 (= 1.24-2),
libgmp10 (= 2:6.3.0+dfsg-2+b2),
libgomp1 (= 14.2.0-8),
libgprofng0 (= 2.43.1-5),
libhwasan0 (= 14.2.0-8),
libicu72 (= 72.1-5+b1),
libisl23 (= 0.27-1),
libitm1 (= 14.2.0-8),
libjansson4 (= 2.14-2+b3),
liblsan0 (= 14.2.0-8),
liblzma5 (= 5.6.3-1+b1),
libmagic-mgc (= 1:5.45-3+b1),
libmagic1t64 (= 1:5.45-3+b1),
libmd0 (= 1.1.0-2+b1),
libmount1 (= 2.40.2-11),
libmpc3 (= 1.3.1-1+b3),
libmpfr6 (= 4.2.1-1+b2),
libpam-modules (= 1.5.3-7+b1),
libpam-modules-bin (= 1.5.3-7+b1),
libpam-runtime (= 1.5.3-7),
libpam0g (= 1.5.3-7+b1),
libpcre2-8-0 (= 10.44-4),
libperl5.40 (= 5.40.0-7),
libpipeline1 (= 1.5.8-1),
libseccomp2 (= 2.5.5-1+b3),
libselinux1 (= 3.7-3+b1),
libsframe1 (= 2.43.1-5),
libsmartcols1 (= 2.40.2-11),
libssl3t64 (= 3.3.2-2),
libstdc++-14-dev (= 14.2.0-8),
libstdc++6 (= 14.2.0-8),
libsystemd0 (= 257~rc2-3),
libtinfo6 (= 6.5-2+b1),
libtool (= 2.4.7-8),
libtsan2 (= 14.2.0-8),
libubsan1 (= 14.2.0-8),
libuchardet0 (= 0.0.8-1+b2),
libudev1 (= 257~rc2-3),
libunistring5 (= 1.2-1+b1),
libuuid1 (= 2.40.2-11),
libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1),
libzstd1 (= 1.5.6+dfsg-1+b1),
linux-libc-dev (= 6.11.7-1),
m4 (= 1.4.19-4),
make (= 4.3-4.1+b1),
man-db (= 2.13.0-1),
mawk (= 1.3.4.20240905-1),
ncurses-base (= 6.5-2),
ncurses-bin (= 6.5-2+b1),
openssl-provider-legacy (= 3.3.2-2),
patch (= 2.7.6-7+b1),
perl (= 5.40.0-7),
perl-base (= 5.40.0-7),
perl-modules-5.40 (= 5.40.0-7),
po-debconf (= 1.0.21+nmu1),
rpcsvc-proto (= 1.4.3-1+b1),
sed (= 4.9-2+b1),
sensible-utils (= 0.0.24),
sysvinit-utils (= 3.11-1),
tar (= 1.35+dfsg-3+b1),
util-linux (= 2.40.2-11),
xz-utils (= 5.6.3-1+b1),
zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
DEB_BUILD_OPTIONS="parallel=8"
LANG="en_US.UTF-8"
LC_ALL="C.UTF-8"
SOURCE_DATE_EPOCH="1582528972"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
loki-dbgsym_2.4.7.4-10_arm64.deb
--------------------------------
new Debian package, version 2.0.
size 15448 bytes: control archive=636 bytes.
404 bytes, 12 lines control
294 bytes, 3 lines md5sums
Package: loki-dbgsym
Source: loki
Version: 2.4.7.4-10
Auto-Built-Package: debug-symbols
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 43
Depends: loki (= 2.4.7.4-10)
Section: debug
Priority: optional
Description: debug symbols for loki
Build-Ids: 659c0669e2ccceeab938e7baabbce29107b6942e fb9a15cd28d9e5ab3ad2f560823be55a5d3ebf3b
drwxr-xr-x root/root 0 2020-02-24 07:22 ./
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/.build-id/65/
-rw-r--r-- root/root 12776 2020-02-24 07:22 ./usr/lib/debug/.build-id/65/9c0669e2ccceeab938e7baabbce29107b6942e.debug
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/.build-id/fb/
-rw-r--r-- root/root 13792 2020-02-24 07:22 ./usr/lib/debug/.build-id/fb/9a15cd28d9e5ab3ad2f560823be55a5d3ebf3b.debug
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root 2136 2020-02-24 07:22 ./usr/lib/debug/.dwz/aarch64-linux-gnu/loki.debug
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/doc/loki-dbgsym -> loki
loki-doc_2.4.7.4-10_all.deb
---------------------------
new Debian package, version 2.0.
size 224236 bytes: control archive=996 bytes.
795 bytes, 18 lines control
564 bytes, 8 lines md5sums
Package: loki-doc
Source: loki
Version: 2.4.7.4-10
Architecture: all
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 228
Enhances: loki
Section: doc
Priority: optional
Description: MCMC linkage analysis on general pedigrees (PS manual)
Performs Markov chain Monte Carlo multipoint linkage analysis on large,
complex pedigrees. The current package supports analyses on quantitative
traits only, although this restriction will be lifted in later versions.
Joint estimation of QTL number, position and effects uses Reversible Jump
MCMC. It is also possible to perform affected only IBD sharing analyses.
.
Documentation on how to use Simon Heath's "prep" and "loki" tools
for MCMC genetic linkage and IBD analysis on general pedigrees.
drwxr-xr-x root/root 0 2020-02-24 07:22 ./
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc-base/
-rw-r--r-- root/root 219 2020-02-24 07:22 ./usr/share/doc-base/loki-doc.lokifaq
-rw-r--r-- root/root 257 2020-02-24 07:22 ./usr/share/doc-base/loki-doc.lokimanual
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/loki-doc/
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-rw-r--r-- root/root 696 2020-02-24 07:22 ./usr/share/doc/loki-doc/changelog.Debian.gz
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-rw-r--r-- root/root 1943 2020-02-24 07:22 ./usr/share/doc/loki-doc/copyright
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-rw-r--r-- root/root 181111 2003-04-25 08:23 ./usr/share/doc/loki/loki_doc.ps.gz
-rw-r--r-- root/root 32665 2002-11-18 11:05 ./usr/share/doc/loki/loki_faq.ps.gz
loki_2.4.7.4-10_arm64.deb
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new Debian package, version 2.0.
size 34356 bytes: control archive=1536 bytes.
666 bytes, 15 lines control
2063 bytes, 31 lines md5sums
Package: loki
Version: 2.4.7.4-10
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 223
Depends: libc6 (>= 2.34)
Suggests: loki-doc
Section: science
Priority: optional
Description: MCMC linkage analysis on general pedigrees
Performs Markov chain Monte Carlo multipoint linkage analysis on large,
complex pedigrees. The current package supports analyses on quantitative
traits only, although this restriction will be lifted in later versions.
Joint estimation of QTL number, position and effects uses Reversible Jump
MCMC. It is also possible to perform affected only IBD sharing analyses.
drwxr-xr-x root/root 0 2020-02-24 07:22 ./
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drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/bin/
-rwxr-xr-x root/root 67752 2020-02-24 07:22 ./usr/bin/hist
-rwxr-xr-x root/root 8539 2020-02-24 07:22 ./usr/bin/loki_count
-rwxr-xr-x root/root 8426 2020-02-24 07:22 ./usr/bin/loki_dist
-rwxr-xr-x root/root 9834 2020-02-24 07:22 ./usr/bin/loki_ext
-rwxr-xr-x root/root 3471 2020-02-24 07:22 ./usr/bin/loki_freq
-rwxr-xr-x root/root 1442 2020-02-24 07:22 ./usr/bin/loki_sort_error
-rwxr-xr-x root/root 67752 2020-02-24 07:22 ./usr/bin/qavg
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/loki/
-rw-r--r-- root/root 1990 2003-04-15 11:49 ./usr/share/doc/loki/README
-rw-r--r-- root/root 894 2020-02-24 07:22 ./usr/share/doc/loki/README.Debian
-rw-r--r-- root/root 471 2002-04-15 14:06 ./usr/share/doc/loki/README.known_systems
-rw-r--r-- root/root 580 2002-07-11 15:06 ./usr/share/doc/loki/README.multiple_records
-rw-r--r-- root/root 1910 2002-07-11 15:06 ./usr/share/doc/loki/README.parallel_runs
-rw-r--r-- root/root 278 2020-02-24 07:22 ./usr/share/doc/loki/README.test
-rw-r--r-- root/root 694 2020-02-24 07:22 ./usr/share/doc/loki/changelog.Debian.gz
-rw-r--r-- root/root 5084 2004-06-04 09:36 ./usr/share/doc/loki/changelog.gz
-rw-r--r-- root/root 1943 2020-02-24 07:22 ./usr/share/doc/loki/copyright
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/doc/loki/examples/
-rw-r--r-- root/root 795 2020-02-24 07:22 ./usr/share/doc/loki/examples/control_jv
-rw-r--r-- root/root 839 2020-02-24 07:22 ./usr/share/doc/loki/examples/control_jv1
-rw-r--r-- root/root 924 2020-02-24 07:22 ./usr/share/doc/loki/examples/control_jv_cens
-rw-r--r-- root/root 839 2020-02-24 07:22 ./usr/share/doc/loki/examples/control_jv_lm
-rw-r--r-- root/root 802 2020-02-24 07:22 ./usr/share/doc/loki/examples/control_jv_mg
-rw-r--r-- root/root 420 2020-02-24 07:22 ./usr/share/doc/loki/examples/jvped
-rw-r--r-- root/root 187 2020-02-24 07:22 ./usr/share/doc/loki/examples/jvped1
-rw-r--r-- root/root 516 2020-02-24 07:22 ./usr/share/doc/loki/examples/param_gaw9
-rw-r--r-- root/root 216 2020-02-24 07:22 ./usr/share/doc/loki/examples/param_jv
-rw-r--r-- root/root 216 2020-02-24 07:22 ./usr/share/doc/loki/examples/param_jv2
-rw-r--r-- root/root 232 2020-02-24 07:22 ./usr/share/doc/loki/examples/param_jv_lm
-rw-r--r-- root/root 154 2020-02-24 07:22 ./usr/share/doc/loki/examples/param_jv_mg
-rw-r--r-- root/root 6721 2020-02-24 07:22 ./usr/share/doc/loki/examples/test_seedfile
-rw-r--r-- root/root 1009 2020-02-24 07:22 ./usr/share/doc/loki/run-unit-test
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/man/
drwxr-xr-x root/root 0 2020-02-24 07:22 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/hist.1.gz -> loki.1.gz
-rw-r--r-- root/root 1005 2020-02-24 07:22 ./usr/share/man/man1/loki.1.gz
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lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/loki_dist.1.gz -> loki.1.gz
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/loki_ext.1.gz -> loki.1.gz
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/loki_freq.1.gz -> loki.1.gz
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/loki_sort_error.1.gz -> loki.1.gz
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/prep.1.gz -> loki.1.gz
lrwxrwxrwx root/root 0 2020-02-24 07:22 ./usr/share/man/man1/qavg.1.gz -> loki.1.gz
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Build Architecture: arm64
Build Type: binary
Build-Space: 12544
Build-Time: 35
Distribution: sid
Host Architecture: arm64
Install-Time: 16
Job: /tmp/debusine-fetch-exec-upload-a3so3xwf/loki_2.4.7.4-10.dsc
Lintian: warn
Machine Architecture: arm64
Package: loki
Package-Time: 86
Source-Version: 2.4.7.4-10
Space: 12544
Status: successful
Version: 2.4.7.4-10
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Finished at 2024-11-17T09:24:12Z
Build needed 00:01:26, 12544k disk space