Artifact packmol_20.14.3-1_arm64-2024-11-17T18:22:45Z

Metadata
bd_uninstallable: null
filename: packmol_20.14.3-1_arm64-2024-11-17T18:22:45Z.build
source: packmol
version: 1:20.14.3-1

File

packmol_20.14.3-1_arm64-2024-11-17T18:22:45Z.build
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sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-02.freexian.com

+==============================================================================+
| packmol 1:20.14.3-1 (arm64)                  Sun, 17 Nov 2024 18:22:45 +0000 |
+==============================================================================+

Package: packmol
Version: 1:20.14.3-1
Source Version: 1:20.14.3-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.OVDwWRNa2Z...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-ks3wk0up/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/packmol-BNPCZ4/resolver-srYHew' with '<<RESOLVERDIR>>'

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| Update chroot                                                                |
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Get:1 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ InRelease
Ign:1 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ InRelease
Get:2 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ Release [606 B]
Get:2 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ Release [606 B]
Get:3 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ Release.gpg
Ign:3 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ Release.gpg
Get:4 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ Packages [9246 B]
Get:5 http://deb.debian.org/debian sid InRelease [202 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9952 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4909 kB]
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Reading package lists...
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The following packages will be upgraded:
  apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
  libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
  libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
  libsemanage2 libsmartcols1 libsystemd0 libudev1 libuuid1 libxml2 login
  login.defs mount passwd util-linux
30 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 9274 kB/12.8 MB of archives.
After this operation, 603 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libsystemd0 arm64 257~rc2-3 [416 kB]
Get:6 file:/build/packmol-BNPCZ4/resolver-gTp1OT/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libudev1 arm64 257~rc2-3 [139 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 login.defs all 1:4.16.0-5 [185 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 passwd arm64 1:4.16.0-5 [1210 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
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Local sources
-------------

/tmp/debusine-fetch-exec-upload-ks3wk0up/packmol_20.14.3-1.dsc exists in /tmp/debusine-fetch-exec-upload-ks3wk0up; copying to chroot
I: NOTICE: Log filtering will replace 'build/packmol-BNPCZ4/packmol-20.14.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/packmol-BNPCZ4' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), cmake, gfortran, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), cmake, gfortran, build-essential, fakeroot
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [634 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [666 B]
Fetched 1909 B in 0s (153 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cmake cmake-data
  cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
  dh-autoreconf dh-strip-nondeterminism dwz fakeroot g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
  gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu libarchive13t64
  libasan8 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libcurl4t64
  libdebhelper-perl libelf1t64 libexpat1 libfakeroot
  libfile-stripnondeterminism-perl libgcc-14-dev libgfortran-14-dev
  libgfortran5 libhwasan0 libisl23 libitm1 libjsoncpp26 liblsan0 libmpc3
  libmpfr6 libncursesw6 libproc2-0 librhash1 libstdc++-14-dev libtool libtsan2
  libubsan1 libuv1t64 linux-libc-dev m4 po-debconf procps rpcsvc-proto
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
  elpa-cmake-mode ninja-build cpp-doc gcc-14-locales cpp-14-doc dh-make
  gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gdb-aarch64-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev lrzip
  libc-devtools glibc-doc libstdc++-14-doc libtool-doc gcj-jdk m4-doc
  libmail-box-perl
Recommended packages:
  manpages manpages-dev libarchive-cpio-perl libgpm2 libltdl-dev
  libmail-sendmail-perl psmisc linux-sysctl-defaults
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cmake cmake-data
  cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
  dh-autoreconf dh-strip-nondeterminism dwz fakeroot g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14
  gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu libarchive13t64
  libasan8 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libcurl4t64
  libdebhelper-perl libelf1t64 libexpat1 libfakeroot
  libfile-stripnondeterminism-perl libgcc-14-dev libgfortran-14-dev
  libgfortran5 libhwasan0 libisl23 libitm1 libjsoncpp26 liblsan0 libmpc3
  libmpfr6 libncursesw6 libproc2-0 librhash1 libstdc++-14-dev libtool libtsan2
  libubsan1 libuv1t64 linux-libc-dev m4 po-debconf procps rpcsvc-proto
  sbuild-build-depends-main-dummy
0 upgraded, 64 newly installed, 0 to remove and 0 not upgraded.
Need to get 85.8 MB of archives.
After this operation, 332 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [900 B]
Get:2 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2+b1 [125 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 procps arm64 2:4.0.4-6 [872 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:20 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:21 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:22 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:31 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:33 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:34 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:36 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:38 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:39 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:40 http://deb.debian.org/debian sid/main arm64 cmake-data all 3.31.0-1 [2265 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libjsoncpp26 arm64 1.9.6-2 [73.1 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 librhash1 arm64 1.4.5-1 [129 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 cmake arm64 3.31.0-1 [9874 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:51 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:53 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 libgfortran-14-dev arm64 14.2.0-8 [418 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-8 [9791 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 gfortran-14 arm64 14.2.0-8 [12.2 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1 [1284 B]
Get:64 http://deb.debian.org/debian sid/main arm64 gfortran arm64 4:14.2.0-1 [1424 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 85.8 MB in 1s (90.1 MB/s)
Selecting previously unselected package libncursesw6:arm64.
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Setting up po-debconf (1.0.21+nmu1) ...
Setting up libdebhelper-perl (13.20) ...
Setting up libuv1t64:arm64 (1.48.0-7) ...
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update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
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Setting up autoconf (2.72-3) ...
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Setting up dwz (0.15-1+b1) ...
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Setting up libcrypt-dev:arm64 (1:4.4.36-5) ...
Setting up libasan8:arm64 (14.2.0-8) ...
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Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up cpp-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up cmake (3.31.0-1) ...
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Setting up gcc (4:14.2.0-1) ...
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update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
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update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
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Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
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+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
Package versions: appstream_1.0.3-1+b1 apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 cmake_3.31.0-1 cmake-data_3.31.0-1 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-aarch64-linux-gnu_14.2.0-8 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9+b1 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1+b1 diffutils_1:3.10-1+b1 dpkg_1.22.12~1.gbp82cafd dpkg-dev_1.22.12~1.gbp82cafd dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-aarch64-linux-gnu_14.2.0-8 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: packmol
Binary: packmol
Architecture: any
Version: 1:20.14.3-1
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Uploaders: Drew Parsons <dparsons@debian.org>
Homepage: http://m3g.iqm.unicamp.br/packmol/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/debichem-team/packmol
Vcs-Git: https://salsa.debian.org/debichem-team/packmol.git
Build-Depends: debhelper-compat (= 13), cmake, gfortran
Package-List:
 packmol deb science optional arch=any
Checksums-Sha1:
 846f3bb61936da6270ccd70c3f4573db104e9db5 102530 packmol_20.14.3.orig.tar.gz
 159c592942d9098810cec46225073710d7d3aa06 2904 packmol_20.14.3-1.debian.tar.xz
Checksums-Sha256:
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Files:
 6a3128e4d2ccdf299ae9a807128be9d6 102530 packmol_20.14.3.orig.tar.gz
 57a3d64f80e0a661711887a45f311627 2904 packmol_20.14.3-1.debian.tar.xz

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gpgv: Signature made Sun Feb 18 19:53:16 2024 UTC
gpgv:                using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.3-1.dsc: no acceptable signature found
dpkg-source: info: extracting packmol in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking packmol_20.14.3.orig.tar.gz
dpkg-source: info: unpacking packmol_20.14.3-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package packmol
dpkg-buildpackage: info: source version 1:20.14.3-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Drew Parsons <dparsons@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem=cmake
   dh_auto_clean -O--buildsystem=cmake
   dh_autoreconf_clean -O--buildsystem=cmake
   dh_clean -O--buildsystem=cmake
 debian/rules binary
dh binary --buildsystem=cmake
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   dh_autoreconf -O--buildsystem=cmake
   dh_auto_configure -O--buildsystem=cmake
	cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu ..
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The Fortran compiler identification is GNU 14.2.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/f95 - skipped
-- Configuring done (0.7s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
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-- Build files have been written to: /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu
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	cd obj-aarch64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
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Dependee "/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/depend.internal".
Scanning dependencies of target packmol
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/usr/bin/f95   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -Wall -c /<<PKGBUILDDIR>>/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o
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/usr/bin/f95   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -Wall -c /<<PKGBUILDDIR>>/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o
/usr/bin/f95   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -Wall -c /<<PKGBUILDDIR>>/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o
/usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU
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   62 |       subroutine evalnal(n,x,m,lambda,rho,g,flag)
      |                                     1
Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:62:41:

   62 |       subroutine evalnal(n,x,m,lambda,rho,g,flag)
      |                                         1
Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument]
/usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build
/<<PKGBUILDDIR>>/src/gencan.f:2593:40:

 2593 |      +steabs,epsrel,epsabs,infrel,infabs)
      |                                        1
Warning: Unused dummy argument ‘infabs’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:2593:33:

 2593 |      +steabs,epsrel,epsabs,infrel,infabs)
      |                                 1
Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:2593:12:

 2593 |      +steabs,epsrel,epsabs,infrel,infabs)
      |            1
Warning: Unused dummy argument ‘steabs’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:2592:71:

 2592 |      +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel,
      |                                                                       1
Warning: Unused dummy argument ‘sterel’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:3827:61:

 3827 |      +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs)
      |                                                             1
Warning: Unused dummy argument ‘infabs’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:3827:54:

 3827 |      +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs)
      |                                                      1
Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:4:36:

    4 |       subroutine evalal(n,x,m,lambda,rho,f,flag)
      |                                    1
Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:4:40:

    4 |       subroutine evalal(n,x,m,lambda,rho,f,flag)
      |                                        1
Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:2989:19:

 2989 |      +epsabs,infrel,infabs)
      |                   1
Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5187:19:

 5187 |      +steabs,inform)
      |                   1
Warning: Unused dummy argument ‘inform’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5186:52:

 5186 |       subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel,
      |                                                    1
Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5186:56:

 5186 |       subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel,
      |                                                        1
Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5187:12:

 5187 |      +steabs,inform)
      |            1
Warning: Unused dummy argument ‘steabs’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5186:71:

 5186 |       subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel,
      |                                                                       1
Warning: Unused dummy argument ‘sterel’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:5186:64:

 5186 |       subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel,
      |                                                                1
Warning: Unused dummy argument ‘xtmp’ at (1) [-Wunused-dummy-argument]
/<<PKGBUILDDIR>>/src/gencan.f:125:25:

  125 |       subroutine evalhd(n)
      |                         1
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[ 90%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o
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[ 92%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o
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[ 95%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o
[ 97%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o
/usr/bin/f95   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -Wall -c /<<PKGBUILDDIR>>/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o
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/<<PKGBUILDDIR>>/src/getinp.f90:962:11:

  962 |         if(ires.ne.ireslast) then
      |           ^
Warning: ‘ireslast’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/getinp.f90:947:34:

  947 |   integer :: iread, ires, ireslast, nres, ioerr
      |                                  ^
note: ‘ireslast’ was declared here
/<<PKGBUILDDIR>>/src/output.f90:572:32:

  572 |         nres = ilres - ifres + 1
      |                                ^
Warning: ‘ilres’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/output.f90:18:53:

   18 |              irest, iimol, ichain, iatom, irec, ilres, ifres,&
      |                                                     ^
note: ‘ilres’ was declared here
/<<PKGBUILDDIR>>/app/packmol.f90:346:44:

  346 |             iratom(icart,iratcount) = iirest
      |                                            ^
Warning: ‘iirest’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/app/packmol.f90:50:42:

   50 |   integer :: i, iline, iiatom, iat, iirest, iratcount, ival
      |                                          ^
note: ‘iirest’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3361:72:

 3361 |      +             beta ** 2 * dnorm2
      |                                                                        ^
Warning: ‘alpha’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3243:31:

 3243 |       double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n,
      |                               ^
note: ‘alpha’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3502:72:

 3502 |       amax  = min( amax1 , amax2  )
      |                                                                        ^
Warning: ‘amax1’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3243:42:

 3243 |       double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n,
      |                                          ^
note: ‘amax1’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3503:72:

 3503 |       amaxn = max( amax1n, amax2n )
      |                                                                        ^
Warning: ‘amax1n’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3243:49:

 3243 |       double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n,
      |                                                 ^
note: ‘amax1n’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3361:72:

 3361 |      +             beta ** 2 * dnorm2
      |                                                                        ^
Warning: ‘dnorm2’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3244:67:

 3244 |      +        amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr,
      |                                                                   ^
note: ‘dnorm2’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3361:72:

 3361 |      +             beta ** 2 * dnorm2
      |                                                                        ^
Warning: ‘dtr’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3244:71:

 3244 |      +        amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr,
      |                                                                       ^
note: ‘dtr’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3361:72:

 3361 |      +             beta ** 2 * dnorm2
      |                                                                        ^
Warning: ‘dtw’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3245:21:

 3245 |      +        dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2,
      |                     ^
note: ‘dtw’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3354:72:

 3354 |           beta = rnorm2 / rnorm2prev
      |                                                                        ^
Warning: ‘rnorm2prev’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3246:24:

 3246 |      +        rnorm2prev,snorm2,snorm2prev
      |                        ^
note: ‘rnorm2prev’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3651:72:

 3651 |               rbdind  = rbdposaind
      |                                                                        ^
Warning: ‘rbdposaind’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3242:56:

 3242 |       integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype
      |                                                        ^
note: ‘rbdposaind’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:3658:14:

 3658 |           if ( rbdtype .eq. 1 ) then
      |              ^
Warning: ‘rbdposatype’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:3242:68:

 3242 |       integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype
      |                                                                    ^
note: ‘rbdposatype’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:2140:72:

 2140 |               delta = max( delmin, 10.0d0 * sqrt( sts ) )
      |                                                                        ^
Warning: ‘sts’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:1677:37:

 1677 |      +        kappa,lamspg,ometa2,sts,sty,xnorm
      |                                     ^
note: ‘sts’ was declared here
/<<PKGBUILDDIR>>/src/gencan.f:2312:35:

 2312 |               if ( iter .eq. 1 .or. sty .le. 0.0d0 ) then
      |                                   ^
Warning: ‘sty’ may be used uninitialized [-Wmaybe-uninitialized]
/<<PKGBUILDDIR>>/src/gencan.f:1677:41:

 1677 |      +        kappa,lamspg,ometa2,sts,sty,xnorm
      |                                         ^
note: ‘sty’ was declared here
[100%] Linking Fortran executable packmol
/usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1
/usr/bin/f95 -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/packmol.dir/link.d -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
[100%] Built target packmol
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-aarch64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
   dh_auto_test -O--buildsystem=cmake
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=cmake
   dh_prep -O--buildsystem=cmake
   dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake
	cd obj-aarch64-linux-gnu && make -j16 install DESTDIR=/<<PKGBUILDDIR>>/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/packmol/usr/bin/packmol
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-aarch64-linux-gnu'
   dh_install -O--buildsystem=cmake
   dh_installdocs -O--buildsystem=cmake
   dh_installchangelogs -O--buildsystem=cmake
   dh_installsystemduser -O--buildsystem=cmake
   dh_lintian -O--buildsystem=cmake
   dh_perl -O--buildsystem=cmake
   dh_link -O--buildsystem=cmake
   dh_strip_nondeterminism -O--buildsystem=cmake
   dh_compress -O--buildsystem=cmake
   dh_fixperms -O--buildsystem=cmake
   dh_missing -O--buildsystem=cmake
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
   dh_installdeb -O--buildsystem=cmake
   dh_gencontrol -O--buildsystem=cmake
   dh_md5sums -O--buildsystem=cmake
   dh_builddeb -O--buildsystem=cmake
dpkg-deb: building package 'packmol' in '../packmol_20.14.3-1_arm64.deb'.
dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.3-1_arm64.deb'.
 dpkg-genbuildinfo --build=binary -O../packmol_20.14.3-1_arm64.buildinfo
 dpkg-genchanges --build=binary -O../packmol_20.14.3-1_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-17T18:23:54Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


packmol_20.14.3-1_arm64.changes:
--------------------------------

Format: 1.8
Date: Sun, 18 Feb 2024 20:46:27 +0100
Source: packmol
Binary: packmol packmol-dbgsym
Architecture: arm64
Version: 1:20.14.3-1
Distribution: sid
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Drew Parsons <dparsons@debian.org>
Description:
 packmol    - Initial configurations for Molecular Dynamics Simulations
Changes:
 packmol (1:20.14.3-1) unstable; urgency=medium
 .
   * New upstream release.
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Files:
 8d38b70590d39fa6b84bb49d41b0d7c4 129548 debug optional packmol-dbgsym_20.14.3-1_arm64.deb
 ddaa177fcd8f8332dd530e6601d585d0 6053 science optional packmol_20.14.3-1_arm64.buildinfo
 617f3f0a2720fa75a5043d8161a7d406 103360 science optional packmol_20.14.3-1_arm64.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: packmol
Binary: packmol packmol-dbgsym
Architecture: arm64
Version: 1:20.14.3-1
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Sun, 17 Nov 2024 18:23:54 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
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 libpsl5t64 (= 0.21.2-1.1+b1),
 librhash1 (= 1.4.5-1),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5),
 libsasl2-2 (= 2.1.28+dfsg1-8),
 libsasl2-modules-db (= 2.1.28+dfsg1-8),
 libseccomp2 (= 2.5.5-1+b3),
 libselinux1 (= 3.7-3+b1),
 libsframe1 (= 2.43.1-5),
 libsmartcols1 (= 2.40.2-11),
 libssh2-1t64 (= 1.11.1-1),
 libssl3t64 (= 3.3.2-2),
 libstdc++-14-dev (= 14.2.0-8),
 libstdc++6 (= 14.2.0-8),
 libsystemd0 (= 257~rc2-3),
 libtasn1-6 (= 4.19.0-3+b3),
 libtinfo6 (= 6.5-2+b1),
 libtool (= 2.4.7-8),
 libtsan2 (= 14.2.0-8),
 libubsan1 (= 14.2.0-8),
 libuchardet0 (= 0.0.8-1+b2),
 libudev1 (= 257~rc2-3),
 libunistring5 (= 1.2-1+b1),
 libuuid1 (= 2.40.2-11),
 libuv1t64 (= 1.48.0-7),
 libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1),
 libxxhash0 (= 0.8.2-2+b2),
 libzstd1 (= 1.5.6+dfsg-1+b1),
 linux-libc-dev (= 6.11.7-1),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1+b1),
 man-db (= 2.13.0-1),
 mawk (= 1.3.4.20240905-1),
 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2+b1),
 openssl-provider-legacy (= 3.3.2-2),
 patch (= 2.7.6-7+b1),
 perl (= 5.40.0-7),
 perl-base (= 5.40.0-7),
 perl-modules-5.40 (= 5.40.0-7),
 po-debconf (= 1.0.21+nmu1),
 procps (= 2:4.0.4-6),
 rpcsvc-proto (= 1.4.3-1+b1),
 sed (= 4.9-2+b1),
 sensible-utils (= 0.0.24),
 sysvinit-utils (= 3.11-1),
 tar (= 1.35+dfsg-3+b1),
 util-linux (= 2.40.2-11),
 xz-utils (= 5.6.3-1+b1),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
 DEB_BUILD_OPTIONS="parallel=16"
 LANG="en_US.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1708285587"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


packmol-dbgsym_20.14.3-1_arm64.deb
----------------------------------

 new Debian package, version 2.0.
 size 129548 bytes: control archive=528 bytes.
     360 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: packmol-dbgsym
 Source: packmol
 Version: 1:20.14.3-1
 Auto-Built-Package: debug-symbols
 Architecture: arm64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 152
 Depends: packmol (= 1:20.14.3-1)
 Section: debug
 Priority: optional
 Description: debug symbols for packmol
 Build-Ids: e5f673ac2cb4e1b81a9ba205d75d57eb46dffbd3

drwxr-xr-x root/root         0 2024-02-18 19:46 ./
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/lib/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/lib/debug/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/lib/debug/.build-id/e5/
-rw-r--r-- root/root    145064 2024-02-18 19:46 ./usr/lib/debug/.build-id/e5/f673ac2cb4e1b81a9ba205d75d57eb46dffbd3.debug
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/doc/
lrwxrwxrwx root/root         0 2024-02-18 19:46 ./usr/share/doc/packmol-dbgsym -> packmol


packmol_20.14.3-1_arm64.deb
---------------------------

 new Debian package, version 2.0.
 size 103360 bytes: control archive=1408 bytes.
    1887 bytes,    47 lines      control
     446 bytes,     7 lines      md5sums
 Package: packmol
 Version: 1:20.14.3-1
 Architecture: arm64
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 406
 Depends: libc6 (>= 2.34), libgfortran5 (>= 10)
 Recommends: tcl
 Section: science
 Priority: optional
 Homepage: http://m3g.iqm.unicamp.br/packmol/
 Description: Initial configurations for Molecular Dynamics Simulations
  Initial configurations for Molecular Dynamics Simulations by packing
  optimization.
  .
  Packmol creates an initial point for molecular dynamics simulations by
  packing molecules in defined regions of space. The packing guarantees
  that short range repulsive interactions do not disrupt the
  simulations.
  .
  The great variety of types of spatial constraints that can be
  attributed to the molecules, or atoms within the molecules, makes it
  easy to create ordered systems, such as lamellar, spherical or tubular
  lipid layers.
  .
  The user must provide only the coordinates of one molecule of each
  type, the number of molecules of each type and the spatial constraints
  that each type of molecule must satisfy.
  .
  The package is compatible with input files of PDB, TINKER, XYZ and
  MOLDY formats.
  .
  See http://m3g.iqm.unicamp.br/packmol for more information.
  .
  References
  .
  Please always cite one of the following references in publications for
  which Packmol was useful:
  .
  L Martinez, R Andrade, EG Birgin, JM Martinez, Packmol: A package for
  building initial configurations for molecular dynamics simulations.
  Journal of Computational Chemistry, 30, 2157-2164, 2009.
  (http://www3.interscience.wiley.com/journal/122210103/abstract)
  .
  JM Martinez, L Martinez, Packing optimization for the automated
  generation of complex system's initial configurations for molecular
  dynamics and docking. Journal of Computational Chemistry, 24, 819-825,
  2003. (http://www3.interscience.wiley.com/journal/104086246/abstract)

drwxr-xr-x root/root         0 2024-02-18 19:46 ./
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/bin/
-rwxr-xr-x root/root    264648 2024-02-18 19:46 ./usr/bin/packmol
-rwxr-xr-x root/root    131594 2023-11-23 16:54 ./usr/bin/solvate.tcl
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/doc/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/doc/packmol/
-rw-r--r-- root/root       471 2023-11-23 16:54 ./usr/share/doc/packmol/AUTHORS
-rw-r--r-- root/root      3525 2023-11-23 16:54 ./usr/share/doc/packmol/README.md
-rw-r--r-- root/root       546 2024-02-18 19:46 ./usr/share/doc/packmol/changelog.Debian.gz
-rw-r--r-- root/root      1974 2024-02-18 19:46 ./usr/share/doc/packmol/copyright
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/lintian/
drwxr-xr-x root/root         0 2024-02-18 19:46 ./usr/share/lintian/overrides/
-rw-r--r-- root/root        53 2024-02-18 19:46 ./usr/share/lintian/overrides/packmol


lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
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Fetched 3109 B in 0s (247 kB/s)
Reading package lists...
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Get:3 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-gTp1OT/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-lintian-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-lintian-dummy.
(Reading database ... 26618 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
W: packmol changes: distribution-and-changes-mismatch sid unstable
W: packmol: no-manual-page [usr/bin/packmol]
W: packmol: no-manual-page [usr/bin/solvate.tcl]

I: Lintian run was successful.

+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: binary
Build-Space: 4036
Build-Time: 10
Distribution: sid
Host Architecture: arm64
Install-Time: 22
Job: /tmp/debusine-fetch-exec-upload-ks3wk0up/packmol_20.14.3-1.dsc
Lintian: warn
Machine Architecture: arm64
Package: packmol
Package-Time: 69
Source-Version: 1:20.14.3-1
Space: 4036
Status: successful
Version: 1:20.14.3-1
--------------------------------------------------------------------------------
Finished at 2024-11-17T18:23:54Z
Build needed 00:01:09, 4036k disk space

Relations

Relation Direction Type Name
relates-to Source package packmol_1:20.14.3-1
relates-to Binary package dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect_1.22.12~1.gbp82cafd_arm64
relates-to Binary package libdpkg-dev_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg-dev_1.22.12~1.gbp82cafd_all
relates-to Binary package libdpkg-perl_1.22.12~1.gbp82cafd_all
relates-to Binary package packmol-dbgsym_1:20.14.3-1_arm64
relates-to Binary package packmol_1:20.14.3-1_arm64
relates-to Binary packages packmol_1:20.14.3-1

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