deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Depends: libcommons-io-java, default-jre-headless, r-cran-ggplot2, r-cran-scales,
r-cran-gridextra, r-cran-reshape, texlive-latex-base, hdf5-tools, last-align
Description: |-
pre- and post-alignment analysis of nanopore sequencing data
NanoOK is a flexible, multi-reference software for pre- and post-
alignment analysis of nanopore sequencing data, quality and error
profiles.
.
NanoOK (pronounced na-nook) is a tool for extraction, alignment and
analysis of Nanopore reads. NanoOK will extract reads as FASTA or FASTQ
files, align them (with a choice of alignment tools), then generate a
comprehensive multi-page PDF report containing yield, accuracy and
quality analysis. Along the way, it generates plain text files which can
be used for further analysis, as well as graphs suitable for inclusion
in presentations and papers.
Homepage: https://documentation.tgac.ac.uk/display/NANOOK/NanoOK
Installed-Size: '288'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: nanook
Priority: optional
Recommends: blasr, bwa
Section: science
Suggests: default-jre
Version: 1.33+dfsg-5
srcpkg_name: nanook
srcpkg_version: 1.33+dfsg-5