Artifact roary_3.13.0+dfsg-1_arm64-2024-11-18T10:49:37Z

Metadata
bd_uninstallable: null
filename: roary_3.13.0+dfsg-1_arm64-2024-11-18T10:49:37Z.build
source: roary
version: 3.13.0+dfsg-1

File

roary_3.13.0+dfsg-1_arm64-2024-11-18T10:49:37Z.build
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sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-09.freexian.com

+==============================================================================+
| roary 3.13.0+dfsg-1 (arm64)                  Mon, 18 Nov 2024 10:49:37 +0000 |
+==============================================================================+

Package: roary
Version: 3.13.0+dfsg-1
Source Version: 3.13.0+dfsg-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.0siV3fGaxo...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-1faknfh1/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/roary-hcxjvl/resolver-3qR1kZ' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ InRelease
Ign:1 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ InRelease
Get:2 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ Release [606 B]
Get:4 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ Release.gpg
Ign:4 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ Release.gpg
Get:5 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ Packages [9246 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9954 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4910 kB]
Fetched 15.1 MB in 2s (6346 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages will be upgraded:
  apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
  libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
  libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
  libsemanage2 libsmartcols1 libsystemd0 libudev1 libuuid1 libxml2 login
  login.defs mount passwd util-linux
30 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 9274 kB/12.8 MB of archives.
After this operation, 603 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libsystemd0 arm64 257~rc2-3 [416 kB]
Get:6 file:/build/roary-hcxjvl/resolver-p19n8m/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libudev1 arm64 257~rc2-3 [139 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 login.defs all 1:4.16.0-5 [185 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 passwd arm64 1:4.16.0-5 [1210 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 9274 kB in 0s (59.4 MB/s)
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(Reading database ... 17129 files and directories currently installed.)
Preparing to unpack .../bsdutils_1%3a2.40.2-11_arm64.deb ...
Unpacking bsdutils (1:2.40.2-11) over (1:2.40.2-10) ...
Setting up bsdutils (1:2.40.2-11) ...
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Preparing to unpack .../debianutils_5.21_arm64.deb ...
Unpacking debianutils (5.21) over (5.20+b1) ...
Setting up debianutils (5.21) ...
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No schema files found: doing nothing.
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Setting up mount (2.40.2-11) ...
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Setting up libmarkdown2:arm64 (2.2.7-2.1) ...
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Setting up passwd (1:4.16.0-5) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/tmp/debusine-fetch-exec-upload-1faknfh1/roary_3.13.0+dfsg-1.dsc exists in /tmp/debusine-fetch-exec-upload-1faknfh1; copying to chroot
I: NOTICE: Log filtering will replace 'build/roary-hcxjvl/roary-3.13.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/roary-hcxjvl' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 12~), dh-dist-zilla, libdist-zilla-plugin-podweaver-perl, bioperl (>= 1.7.4), libarray-utils-perl, libenv-path-perl, libexception-class-perl, libfile-find-rule-perl, libfile-grep-perl, libfile-slurper-perl, libfile-which-perl, libfindbin-libs-perl, libgraph-perl, libgraph-readwrite-perl, liblog-log4perl-perl, libmoose-perl, libperlio-utf8-strict-perl, libtest-most-perl, libtest-file-perl, libtest-files-perl, libtest-output-perl, libtext-csv-perl, bedtools, cd-hit, ncbi-blast+, mcl, parallel, prank, r-base-core, mafft, fasttree, build-essential, fakeroot, perl
Filtered Build-Depends: debhelper (>= 12~), dh-dist-zilla, libdist-zilla-plugin-podweaver-perl, bioperl (>= 1.7.4), libarray-utils-perl, libenv-path-perl, libexception-class-perl, libfile-find-rule-perl, libfile-grep-perl, libfile-slurper-perl, libfile-which-perl, libfindbin-libs-perl, libgraph-perl, libgraph-readwrite-perl, liblog-log4perl-perl, libmoose-perl, libperlio-utf8-strict-perl, libtest-most-perl, libtest-file-perl, libtest-files-perl, libtest-output-perl, libtext-csv-perl, bedtools, cd-hit, ncbi-blast+, mcl, parallel, prank, r-base-core, mafft, fasttree, build-essential, fakeroot, perl
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1166 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1179 B]
Fetched 2960 B in 0s (261 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bedtools bioperl build-essential
  cd-hit cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
  dh-autoreconf dh-dist-zilla dh-strip-nondeterminism dwz fakeroot fasttree
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libalgorithm-c3-perl
  libalgorithm-diff-perl libapp-cmd-perl libarray-utils-perl libasan8
  libautobox-perl libbio-perl-perl libblas3 libc-dev-bin libc6-dev libcairo2
  libcarp-clan-perl libcc1-0 libclass-c3-perl libclass-load-perl
  libclass-load-xs-perl libclass-singleton-perl libconfig-ini-perl
  libconfig-mvp-perl libconfig-mvp-reader-ini-perl libcpan-uploader-perl
  libcrypt-dev libcurl4t64 libdata-compare-perl libdata-section-perl
  libdata-stag-perl libdatetime-locale-perl libdatetime-perl
  libdatetime-timezone-perl libdatrie1 libdebhelper-perl libdeflate0
  libdevel-globaldestruction-perl libdevel-overloadinfo-perl
  libdist-checkconflicts-perl libdist-zilla-perl
  libdist-zilla-plugin-podweaver-perl libelf1t64 libenv-path-perl
  libeval-closure-perl libexpat1 libexporter-tiny-perl libfakeroot
  libfile-chdir-perl libfile-copy-recursive-perl libfile-grep-perl
  libfile-pushd-perl libfile-sharedir-install-perl libfile-slurper-perl
  libfile-stripnondeterminism-perl libfile-which-perl libfindbin-libs-perl
  libfontconfig1 libfreetype6 libfribidi0 libgcc-14-dev
  libgetopt-long-descriptive-perl libgfortran5 libgraph-perl
  libgraph-readwrite-perl libgraphite2-3 libharfbuzz0b
  libhash-merge-simple-perl libheap-perl libhwasan0 libice6 libio-all-perl
  libio-stringy-perl libio-tiecombine-perl libisl23 libitm1 libjbig0
  libjpeg62-turbo libjson-perl liblapack3 liblerc4 liblist-moreutils-perl
  liblist-moreutils-xs-perl liblmdb0 liblog-dispatch-array-perl
  liblog-dispatch-perl liblog-dispatchouli-perl liblog-log4perl-perl liblsan0
  libmbedcrypto16 libmbedtls21 libmbedx509-7 libmixin-linewise-perl
  libmodule-path-perl libmodule-pluggable-perl
  libmodule-runtime-conflicts-perl libmoose-autobox-perl libmoose-perl
  libmoosex-lazyrequire-perl libmoosex-oneargnew-perl
  libmoosex-role-parameterized-perl libmoosex-setonce-perl
  libmoosex-types-perl libmoosex-types-perl-perl libmpc3 libmpfr6
  libmro-compat-perl libnamespace-autoclean-perl libncursesw6 libnsl2
  libpackage-deprecationmanager-perl libpackage-stash-xs-perl
  libpadwalker-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libparams-validate-perl
  libparams-validationcompiler-perl libparse-yapp-perl
  libperl-prereqscanner-perl libperl-version-perl libpixman-1-0 libpng16-16t64
  libpod-elemental-perl libpod-elemental-perlmunger-perl libpod-eventual-perl
  libpod-weaver-perl libppi-perl libproc2-0 libpython3-stdlib
  libpython3.12-minimal libpython3.12-stdlib librole-hasmessage-perl
  librole-identifiable-perl libscope-guard-perl libsensors-config libsensors5
  libset-object-perl libsharpyuv0 libsm6 libsoftware-license-perl
  libspecio-perl libspiffy-perl libstdc++-14-dev libstring-errf-perl
  libstring-flogger-perl libstring-formatter-perl libstring-rewriteprefix-perl
  libstring-truncate-perl libsub-exporter-formethods-perl
  libsub-exporter-globexporter-perl libsub-uplevel-perl
  libsyntax-keyword-junction-perl libtask-weaken-perl libtcl8.6
  libterm-encoding-perl libtest-deep-perl libtest-differences-perl
  libtest-exception-perl libtest-file-perl libtest-files-perl
  libtest-most-perl libtest-output-perl libtest-warn-perl libtest2-suite-perl
  libtext-csv-perl libtext-diff-perl libtext-template-perl libthai-data
  libthai0 libthrowable-perl libtie-ixhash-perl libtiff6 libtingea0
  libtirpc-common libtirpc3t64 libtk8.6 libtool libtsan2 libtype-tiny-perl
  libubsan1 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl
  libxml-writer-perl libxrender1 libxss1 libxstring-perl libxt6t64
  libyaml-tiny-perl linux-libc-dev m4 mafft mcl media-types ncbi-blast+
  ncbi-data parallel po-debconf prank procps python3 python3-minimal
  python3.12 python3.12-minimal r-base-core rpcsvc-proto sysstat x11-common
  xdg-utils zip
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
  cpp-14-doc dh-make libdist-zilla-app-command-authordebs-perl pristine-tar
  gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gdb-aarch64-linux-gnu libxml-sax-expatxs-perl libc-devtools glibc-doc
  libscalar-properties-perl libdb-file-lock-perl libfile-mimeinfo-perl
  libfile-readbackwards-perl libfreezethaw-perl libdbd-csv-perl
  liblog-dispatch-filerotate-perl librrds-perl libxml-dom-perl lm-sensors
  libtest-fatal-perl libstdc++-14-doc tcl8.6 tk8.6 libtool-doc gfortran
  | fortran95-compiler gcj-jdk libdevel-lexalias-perl m4-doc mcl-doc csh fish
  ksh tcsh zsh libmail-box-perl python3-doc python3-tk python3-venv
  python3.12-venv python3.12-doc binfmt-support elpa-ess r-doc-info
  | r-doc-pdf r-mathlib r-base-html isag
Recommended packages:
  bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libdbi-perl
  libgd-gd2-perl libapache-dbi-perl libxml-simple-perl libyaml-perl
  libace-perl libxml-twig-perl libset-scalar-perl devscripts
  libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl
  libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
  libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl
  libdbd-pg-perl libgd-perl libgraphviz-perl libhtml-tableextract-perl
  libpostscript-perl libsoap-lite-perl libsort-naturally-perl
  libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl
  libsvg-graph-perl libxml-dom-xpath-perl libxml-sax-writer-perl manpages
  manpages-dev libclass-c3-xs-perl perl-tk libgd-gd2-perl
  | libgd-gd2-noxpm-perl libxml-libxslt-perl libxml-perl bash-completion
  cpanminus libarchive-tar-wrapper-perl libpod-coverage-trustpod-perl
  libterm-readline-gnu-perl libterm-ui-perl libtest-cpan-meta-perl
  libtest-pod-coverage-perl libtest-pod-perl libdevel-lexalias-perl
  libarchive-cpio-perl libjson-xs-perl libmail-sendmail-perl libmailtools-perl
  libmime-lite-perl libipc-shareable-perl libdevel-partialdump-perl libgpm2
  libref-util-perl libtext-csv-xs-perl libltdl-dev libtype-tiny-xs-perl blast2
  lynx ruby psmisc linux-sysctl-defaults r-recommended r-base-dev r-doc-html
  systemd | cron | cron-daemon libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bedtools bioperl build-essential
  cd-hit cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper
  dh-autoreconf dh-dist-zilla dh-strip-nondeterminism dwz fakeroot fasttree
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libalgorithm-c3-perl
  libalgorithm-diff-perl libapp-cmd-perl libarray-utils-perl libasan8
  libautobox-perl libbio-perl-perl libblas3 libc-dev-bin libc6-dev libcairo2
  libcarp-clan-perl libcc1-0 libclass-c3-perl libclass-load-perl
  libclass-load-xs-perl libclass-singleton-perl libconfig-ini-perl
  libconfig-mvp-perl libconfig-mvp-reader-ini-perl libcpan-uploader-perl
  libcrypt-dev libcurl4t64 libdata-compare-perl libdata-section-perl
  libdata-stag-perl libdatetime-locale-perl libdatetime-perl
  libdatetime-timezone-perl libdatrie1 libdebhelper-perl libdeflate0
  libdevel-globaldestruction-perl libdevel-overloadinfo-perl
  libdist-checkconflicts-perl libdist-zilla-perl
  libdist-zilla-plugin-podweaver-perl libelf1t64 libenv-path-perl
  libeval-closure-perl libexpat1 libexporter-tiny-perl libfakeroot
  libfile-chdir-perl libfile-copy-recursive-perl libfile-grep-perl
  libfile-pushd-perl libfile-sharedir-install-perl libfile-slurper-perl
  libfile-stripnondeterminism-perl libfile-which-perl libfindbin-libs-perl
  libfontconfig1 libfreetype6 libfribidi0 libgcc-14-dev
  libgetopt-long-descriptive-perl libgfortran5 libgraph-perl
  libgraph-readwrite-perl libgraphite2-3 libharfbuzz0b
  libhash-merge-simple-perl libheap-perl libhwasan0 libice6 libio-all-perl
  libio-stringy-perl libio-tiecombine-perl libisl23 libitm1 libjbig0
  libjpeg62-turbo libjson-perl liblapack3 liblerc4 liblist-moreutils-perl
  liblist-moreutils-xs-perl liblmdb0 liblog-dispatch-array-perl
  liblog-dispatch-perl liblog-dispatchouli-perl liblog-log4perl-perl liblsan0
  libmbedcrypto16 libmbedtls21 libmbedx509-7 libmixin-linewise-perl
  libmodule-path-perl libmodule-pluggable-perl
  libmodule-runtime-conflicts-perl libmoose-autobox-perl libmoose-perl
  libmoosex-lazyrequire-perl libmoosex-oneargnew-perl
  libmoosex-role-parameterized-perl libmoosex-setonce-perl
  libmoosex-types-perl libmoosex-types-perl-perl libmpc3 libmpfr6
  libmro-compat-perl libnamespace-autoclean-perl libncursesw6 libnsl2
  libpackage-deprecationmanager-perl libpackage-stash-xs-perl
  libpadwalker-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libparams-validate-perl
  libparams-validationcompiler-perl libparse-yapp-perl
  libperl-prereqscanner-perl libperl-version-perl libpixman-1-0 libpng16-16t64
  libpod-elemental-perl libpod-elemental-perlmunger-perl libpod-eventual-perl
  libpod-weaver-perl libppi-perl libproc2-0 libpython3-stdlib
  libpython3.12-minimal libpython3.12-stdlib librole-hasmessage-perl
  librole-identifiable-perl libscope-guard-perl libsensors-config libsensors5
  libset-object-perl libsharpyuv0 libsm6 libsoftware-license-perl
  libspecio-perl libspiffy-perl libstdc++-14-dev libstring-errf-perl
  libstring-flogger-perl libstring-formatter-perl libstring-rewriteprefix-perl
  libstring-truncate-perl libsub-exporter-formethods-perl
  libsub-exporter-globexporter-perl libsub-uplevel-perl
  libsyntax-keyword-junction-perl libtask-weaken-perl libtcl8.6
  libterm-encoding-perl libtest-deep-perl libtest-differences-perl
  libtest-exception-perl libtest-file-perl libtest-files-perl
  libtest-most-perl libtest-output-perl libtest-warn-perl libtest2-suite-perl
  libtext-csv-perl libtext-diff-perl libtext-template-perl libthai-data
  libthai0 libthrowable-perl libtie-ixhash-perl libtiff6 libtingea0
  libtirpc-common libtirpc3t64 libtk8.6 libtool libtsan2 libtype-tiny-perl
  libubsan1 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl
  libxml-writer-perl libxrender1 libxss1 libxstring-perl libxt6t64
  libyaml-tiny-perl linux-libc-dev m4 mafft mcl media-types ncbi-blast+
  ncbi-data parallel po-debconf prank procps python3 python3-minimal
  python3.12 python3.12-minimal r-base-core rpcsvc-proto
  sbuild-build-depends-main-dummy sysstat x11-common xdg-utils zip
0 upgraded, 249 newly installed, 0 to remove and 0 not upgraded.
Need to get 145 MB of archives.
After this operation, 538 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1116 B]
Get:2 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2+b1 [125 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.7-3 [671 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B]
Get:14 http://deb.debian.org/debian sid/main arm64 python3 arm64 3.12.7-1 [27.8 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 procps arm64 2:4.0.4-6 [872 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 bedtools arm64 2.31.1+dfsg-2+b1 [601 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 libdata-stag-perl all 0.14-3 [448 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libbio-perl-perl all 1.7.8-1 [2603 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libtest-deep-perl all 1.204-1 [52.9 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libalgorithm-diff-perl all 1.201-1 [43.3 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libtext-diff-perl all 1.45-2 [27.2 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libtest-differences-perl all 0.71-1 [17.9 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libsub-uplevel-perl all 0.2800-3 [14.0 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libtest-exception-perl all 0.43-3 [16.9 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 libtest-warn-perl all 0.37-2 [14.5 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libtest-most-perl all 0.38-1 [25.1 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 bioperl all 1.7.8-1 [246 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:38 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:44 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:45 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:46 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:51 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:55 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:57 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:58 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:60 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:62 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:63 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:64 http://deb.debian.org/debian sid/main arm64 cd-hit arm64 4.8.1-4+b1 [509 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:70 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 libclass-load-perl all 0.25-2 [15.3 kB]
Get:75 http://deb.debian.org/debian sid/main arm64 libio-stringy-perl all 2.113-2 [48.3 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 libparams-validate-perl arm64 1.31-2+b3 [60.8 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 libgetopt-long-descriptive-perl all 0.115-1 [27.6 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 libio-tiecombine-perl all 1.005-3 [10.8 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 libmodule-pluggable-perl all 5.2-5 [23.0 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 libstring-rewriteprefix-perl all 0.009-1 [7140 B]
Get:81 http://deb.debian.org/debian sid/main arm64 libapp-cmd-perl all 0.336-1 [65.8 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 libscope-guard-perl all 0.21-2 [8212 B]
Get:83 http://deb.debian.org/debian sid/main arm64 libautobox-perl arm64 3.0.2-1+b1 [33.0 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libmixin-linewise-perl all 0.111-1 [14.4 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libconfig-ini-perl all 1:0.029-1 [23.7 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libclass-load-xs-perl arm64 0.10-2+b4 [14.3 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get:88 http://deb.debian.org/debian sid/main arm64 libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 libclass-c3-perl all 0.35-2 [21.0 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libmro-compat-perl all 0.15-2 [11.8 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get:92 http://deb.debian.org/debian sid/main arm64 libeval-closure-perl all 0.14-3 [11.2 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get:95 http://deb.debian.org/debian sid/main arm64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libpackage-stash-xs-perl arm64 0.30-1+b4 [19.0 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 libmoose-perl arm64 2.2207-1+b2 [766 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 libnamespace-autoclean-perl all 0.31-1 [13.8 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 libmoosex-role-parameterized-perl all 1.11-2 [41.9 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 libmoosex-oneargnew-perl all 0.007-1 [8180 B]
Get:101 http://deb.debian.org/debian sid/main arm64 libstring-formatter-perl all 1.235-1 [22.1 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 libstring-errf-perl all 0.009-1 [12.9 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 librole-hasmessage-perl all 0.007-1 [9112 B]
Get:104 http://deb.debian.org/debian sid/main arm64 librole-identifiable-perl all 0.009-1 [10.4 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 libthrowable-perl all 1.001-2 [15.7 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 libtie-ixhash-perl all 1.23-4 [11.7 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 libconfig-mvp-perl all 2.200013-1 [47.1 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 libconfig-mvp-reader-ini-perl all 2.101465-1 [6900 B]
Get:109 http://deb.debian.org/debian sid/main arm64 libcpan-uploader-perl all 0.103018-1 [16.3 kB]
Get:110 http://deb.debian.org/debian sid/main arm64 libdata-section-perl all 0.200008-1 [13.1 kB]
Get:111 http://deb.debian.org/debian sid/main arm64 libparams-validationcompiler-perl all 0.31-1 [30.9 kB]
Get:112 http://deb.debian.org/debian sid/main arm64 libxstring-perl arm64 0.005-2+b4 [8104 B]
Get:113 http://deb.debian.org/debian sid/main arm64 libspecio-perl all 0.48-1 [142 kB]
Get:114 http://deb.debian.org/debian sid/main arm64 libdatetime-locale-perl all 1:1.41-1 [3131 kB]
Get:115 http://deb.debian.org/debian sid/main arm64 libclass-singleton-perl all 1.6-2 [12.5 kB]
Get:116 http://deb.debian.org/debian sid/main arm64 libdatetime-timezone-perl all 1:2.63-2+2024b [261 kB]
Get:117 http://deb.debian.org/debian sid/main arm64 libdatetime-perl arm64 2:1.65-1+b2 [116 kB]
Get:118 http://deb.debian.org/debian sid/main arm64 libfile-copy-recursive-perl all 0.45-4 [20.0 kB]
Get:119 http://deb.debian.org/debian sid/main arm64 libfile-pushd-perl all 1.016-2 [13.5 kB]
Get:120 http://deb.debian.org/debian sid/main arm64 libfile-sharedir-install-perl all 0.14-2 [11.6 kB]
Get:121 http://deb.debian.org/debian sid/main arm64 libhash-merge-simple-perl all 0.052-1 [8232 B]
Get:122 http://deb.debian.org/debian sid/main arm64 libjson-perl all 4.10000-1 [87.5 kB]
Get:123 http://deb.debian.org/debian sid/main arm64 liblog-dispatch-perl all 2.71-1 [75.8 kB]
Get:124 http://deb.debian.org/debian sid/main arm64 liblog-dispatch-array-perl all 1.005-1 [6700 B]
Get:125 http://deb.debian.org/debian sid/main arm64 libstring-flogger-perl all 1.101246-1 [7380 B]
Get:126 http://deb.debian.org/debian sid/main arm64 libsub-exporter-globexporter-perl all 0.006-1 [8024 B]
Get:127 http://deb.debian.org/debian sid/main arm64 liblog-dispatchouli-perl all 3.008-1 [34.4 kB]
Get:128 http://deb.debian.org/debian sid/main arm64 libexporter-tiny-perl all 1.006002-1 [38.7 kB]
Get:129 http://deb.debian.org/debian sid/main arm64 liblist-moreutils-xs-perl arm64 0.430-4+b2 [37.7 kB]
Get:130 http://deb.debian.org/debian sid/main arm64 liblist-moreutils-perl all 0.430-2 [46.9 kB]
Get:131 http://deb.debian.org/debian sid/main arm64 libsyntax-keyword-junction-perl all 0.003009-1 [12.7 kB]
Get:132 http://deb.debian.org/debian sid/main arm64 libmoose-autobox-perl all 0.16-2 [52.8 kB]
Get:133 http://deb.debian.org/debian sid/main arm64 libmoosex-lazyrequire-perl all 0.11-2 [9212 B]
Get:134 http://deb.debian.org/debian sid/main arm64 libmoosex-setonce-perl all 0.200002-2 [6632 B]
Get:135 http://deb.debian.org/debian sid/main arm64 libcarp-clan-perl all 6.08-2 [14.1 kB]
Get:136 http://deb.debian.org/debian sid/main arm64 libsub-exporter-formethods-perl all 0.100055-1 [8024 B]
Get:137 http://deb.debian.org/debian sid/main arm64 libmoosex-types-perl all 0.50-2 [54.6 kB]
Get:138 http://deb.debian.org/debian sid/main arm64 libmoosex-types-perl-perl all 0.101344-1 [8160 B]
Get:139 http://deb.debian.org/debian sid/main arm64 libmodule-path-perl all 0.19-3 [12.3 kB]
Get:140 http://deb.debian.org/debian sid/main arm64 libtask-weaken-perl all 1.06-2 [9364 B]
Get:141 http://deb.debian.org/debian sid/main arm64 libppi-perl all 1.279-1 [294 kB]
Get:142 http://deb.debian.org/debian sid/main arm64 libtype-tiny-perl all 2.004000-1 [357 kB]
Get:143 http://deb.debian.org/debian sid/main arm64 libperl-prereqscanner-perl all 1.100-1 [31.0 kB]
Get:144 http://deb.debian.org/debian sid/main arm64 libperl-version-perl all 1.017-1 [29.0 kB]
Get:145 http://deb.debian.org/debian sid/main arm64 libtext-template-perl all 1.61-1 [54.4 kB]
Get:146 http://deb.debian.org/debian sid/main arm64 libsoftware-license-perl all 0.104006-1 [116 kB]
Get:147 http://deb.debian.org/debian sid/main arm64 libterm-encoding-perl all 0.03-2 [4980 B]
Get:148 http://deb.debian.org/debian sid/main arm64 libyaml-tiny-perl all 1.74-1 [30.7 kB]
Get:149 http://deb.debian.org/debian sid/main arm64 libdist-zilla-perl all 6.032-1 [343 kB]
Get:150 http://deb.debian.org/debian sid/main arm64 dh-dist-zilla all 1.4.1 [17.9 kB]
Get:151 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:152 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:153 http://deb.debian.org/debian sid/main arm64 fasttree arm64 2.1.11-2+b1 [175 kB]
Get:154 http://deb.debian.org/debian sid/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB]
Get:155 http://deb.debian.org/debian sid/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB]
Get:156 http://deb.debian.org/debian sid/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get:157 http://deb.debian.org/debian sid/main arm64 fonts-dejavu-core all 2.37-8 [840 kB]
Get:158 http://deb.debian.org/debian sid/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB]
Get:159 http://deb.debian.org/debian sid/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB]
Get:160 http://deb.debian.org/debian sid/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB]
Get:161 http://deb.debian.org/debian sid/main arm64 libarray-utils-perl all 0.5-3 [6184 B]
Get:162 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB]
Get:163 http://deb.debian.org/debian sid/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB]
Get:164 http://deb.debian.org/debian sid/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB]
Get:165 http://deb.debian.org/debian sid/main arm64 libxdmcp6 arm64 1:1.1.2-3+b2 [24.4 kB]
Get:166 http://deb.debian.org/debian sid/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB]
Get:167 http://deb.debian.org/debian sid/main arm64 libx11-data all 2:1.8.10-2 [337 kB]
Get:168 http://deb.debian.org/debian sid/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB]
Get:169 http://deb.debian.org/debian sid/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB]
Get:170 http://deb.debian.org/debian sid/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB]
Get:171 http://deb.debian.org/debian sid/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB]
Get:172 http://deb.debian.org/debian sid/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB]
Get:173 http://deb.debian.org/debian sid/main arm64 libcairo2 arm64 1.18.2-2 [483 kB]
Get:174 http://deb.debian.org/debian sid/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB]
Get:175 http://deb.debian.org/debian sid/main arm64 libdata-compare-perl all 1.29-1 [19.6 kB]
Get:176 http://deb.debian.org/debian sid/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB]
Get:177 http://deb.debian.org/debian sid/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get:178 http://deb.debian.org/debian sid/main arm64 libpod-eventual-perl all 0.094003-1 [14.2 kB]
Get:179 http://deb.debian.org/debian sid/main arm64 libstring-truncate-perl all 1.100603-1 [10.2 kB]
Get:180 http://deb.debian.org/debian sid/main arm64 libpod-elemental-perl all 0.103006-1 [67.2 kB]
Get:181 http://deb.debian.org/debian sid/main arm64 libpod-elemental-perlmunger-perl all 0.200007-1 [10.5 kB]
Get:182 http://deb.debian.org/debian sid/main arm64 libpod-weaver-perl all 4.020-1 [70.1 kB]
Get:183 http://deb.debian.org/debian sid/main arm64 libdist-zilla-plugin-podweaver-perl all 4.010-1 [9580 B]
Get:184 http://deb.debian.org/debian sid/main arm64 libenv-path-perl all 0.19-4 [19.1 kB]
Get:185 http://deb.debian.org/debian sid/main arm64 libfile-chdir-perl all 0.1008-1.2 [11.9 kB]
Get:186 http://deb.debian.org/debian sid/main arm64 libfile-grep-perl all 0.02-3 [8352 B]
Get:187 http://deb.debian.org/debian sid/main arm64 libfile-slurper-perl all 0.014-1 [8560 B]
Get:188 http://deb.debian.org/debian sid/main arm64 libfile-which-perl all 1.27-2 [15.1 kB]
Get:189 http://deb.debian.org/debian sid/main arm64 libfindbin-libs-perl all 3.0.2-1 [29.7 kB]
Get:190 http://deb.debian.org/debian sid/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB]
Get:191 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB]
Get:192 http://deb.debian.org/debian sid/main arm64 libheap-perl all 0.80-5 [34.3 kB]
Get:193 http://deb.debian.org/debian sid/main arm64 libset-object-perl arm64 1.42-1+b5 [36.4 kB]
Get:194 http://deb.debian.org/debian sid/main arm64 libgraph-perl all 1:0.9729-1 [108 kB]
Get:195 http://deb.debian.org/debian sid/main arm64 libspiffy-perl all 0.46-1 [25.7 kB]
Get:196 http://deb.debian.org/debian sid/main arm64 libio-all-perl all 0.87-2 [67.3 kB]
Get:197 http://deb.debian.org/debian sid/main arm64 libparse-yapp-perl all 1.21-4 [41.5 kB]
Get:198 http://deb.debian.org/debian sid/main arm64 libxml-parser-perl arm64 2.47-1+b3 [197 kB]
Get:199 http://deb.debian.org/debian sid/main arm64 libxml-writer-perl all 0.900-2 [26.8 kB]
Get:200 http://deb.debian.org/debian sid/main arm64 libgraph-readwrite-perl all 2.10-1 [45.2 kB]
Get:201 http://deb.debian.org/debian sid/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB]
Get:202 http://deb.debian.org/debian sid/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB]
Get:203 http://deb.debian.org/debian sid/main arm64 x11-common all 1:7.7+23.1 [216 kB]
Get:204 http://deb.debian.org/debian sid/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB]
Get:205 http://deb.debian.org/debian sid/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB]
Get:206 http://deb.debian.org/debian sid/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB]
Get:207 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB]
Get:208 http://deb.debian.org/debian sid/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB]
Get:209 http://deb.debian.org/debian sid/main arm64 liblmdb0 arm64 0.9.31-1+b2 [43.5 kB]
Get:210 http://deb.debian.org/debian sid/main arm64 liblog-log4perl-perl all 1.57-1 [367 kB]
Get:211 http://deb.debian.org/debian sid/main arm64 libmbedcrypto16 arm64 3.6.2-3 [341 kB]
Get:212 http://deb.debian.org/debian sid/main arm64 libmbedx509-7 arm64 3.6.2-3 [146 kB]
Get:213 http://deb.debian.org/debian sid/main arm64 libmbedtls21 arm64 3.6.2-3 [222 kB]
Get:214 http://deb.debian.org/debian sid/main arm64 libpadwalker-perl arm64 2.5-1+b6 [18.4 kB]
Get:215 http://deb.debian.org/debian sid/main arm64 libthai-data all 0.1.29-2 [168 kB]
Get:216 http://deb.debian.org/debian sid/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB]
Get:217 http://deb.debian.org/debian sid/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB]
Get:218 http://deb.debian.org/debian sid/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB]
Get:219 http://deb.debian.org/debian sid/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB]
Get:220 http://deb.debian.org/debian sid/main arm64 libpaper1 arm64 1.1.29+b2 [13.0 kB]
Get:221 http://deb.debian.org/debian sid/main arm64 libpaper-utils arm64 1.1.29+b2 [9128 B]
Get:222 http://deb.debian.org/debian sid/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get:223 http://deb.debian.org/debian sid/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB]
Get:224 http://deb.debian.org/debian sid/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB]
Get:225 http://deb.debian.org/debian sid/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB]
Get:226 http://deb.debian.org/debian sid/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [982 kB]
Get:227 http://deb.debian.org/debian sid/main arm64 libtest-file-perl all 1.993-1 [24.5 kB]
Get:228 http://deb.debian.org/debian sid/main arm64 libtest2-suite-perl all 0.000163-1 [383 kB]
Get:229 http://deb.debian.org/debian sid/main arm64 libtest-files-perl all 0.26-1 [21.6 kB]
Get:230 http://deb.debian.org/debian sid/main arm64 libtest-output-perl all 1.034-1 [16.0 kB]
Get:231 http://deb.debian.org/debian sid/main arm64 libtext-csv-perl all 2.04-1 [112 kB]
Get:232 http://deb.debian.org/debian sid/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB]
Get:233 http://deb.debian.org/debian sid/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB]
Get:234 http://deb.debian.org/debian sid/main arm64 libtingea0 arm64 21-361-2+b2 [48.7 kB]
Get:235 http://deb.debian.org/debian sid/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB]
Get:236 http://deb.debian.org/debian sid/main arm64 libxss1 arm64 1:1.2.3-1+b2 [17.1 kB]
Get:237 http://deb.debian.org/debian sid/main arm64 libtk8.6 arm64 8.6.15-1 [738 kB]
Get:238 http://deb.debian.org/debian sid/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB]
Get:239 http://deb.debian.org/debian sid/main arm64 libxt6t64 arm64 1:1.2.1-1.2+b1 [173 kB]
Get:240 http://deb.debian.org/debian sid/main arm64 mafft arm64 7.505-1+b1 [960 kB]
Get:241 http://deb.debian.org/debian sid/main arm64 mcl arm64 1:22-282+ds-2+b1 [453 kB]
Get:242 http://deb.debian.org/debian sid/main arm64 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB]
Get:243 http://deb.debian.org/debian sid/main arm64 ncbi-blast+ arm64 2.16.0+ds-6+b1 [13.8 MB]
Get:244 http://deb.debian.org/debian sid/main arm64 sysstat arm64 12.7.5-2+b1 [596 kB]
Get:245 http://deb.debian.org/debian sid/main arm64 parallel all 20240222+ds-2 [2163 kB]
Get:246 http://deb.debian.org/debian sid/main arm64 prank arm64 0.0.170427+dfsg-3+b1 [334 kB]
Get:247 http://deb.debian.org/debian sid/main arm64 zip arm64 3.0-14+b1 [227 kB]
Get:248 http://deb.debian.org/debian sid/main arm64 xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:249 http://deb.debian.org/debian sid/main arm64 r-base-core arm64 4.4.2-1 [28.0 MB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libpython3.12-minimal:arm64 (3.12.7-3) ...
Setting up libexpat1:arm64 (2.6.4-1) ...
Setting up python3.12-minimal (3.12.7-3) ...
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Unpacking python3.12 (3.12.7-3) ...
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Setting up python3-minimal (3.12.7-1) ...
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Unpacking python3 (3.12.7-1) ...
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Unpacking libproc2-0:arm64 (2:4.0.4-6) ...
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Unpacking procps (2:4.0.4-6) ...
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Unpacking bedtools (2.31.1+dfsg-2+b1) ...
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Setting up libnamespace-autoclean-perl (0.31-1) ...
Setting up libperl-version-perl (1.017-1) ...
Setting up libc-dev-bin (2.40-3) ...
Setting up libparams-validate-perl:arm64 (1.31-2+b3) ...
Setting up libautobox-perl (3.0.2-1+b1) ...
Setting up sysstat (12.7.5-2+b1) ...

Creating config file /etc/default/sysstat with new version
update-alternatives: using /usr/bin/sar.sysstat to provide /usr/bin/sar (sar) in auto mode
Setting up libsub-exporter-globexporter-perl (0.006-1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up bedtools (2.31.1+dfsg-2+b1) ...
Setting up libcc1-0:arm64 (14.2.0-8) ...
Setting up liblsan0:arm64 (14.2.0-8) ...
Setting up libstring-rewriteprefix-perl (0.009-1) ...
Setting up libitm1:arm64 (14.2.0-8) ...
Setting up prank (0.0.170427+dfsg-3+b1) ...
Setting up libeval-closure-perl (0.14-3) ...
Setting up libtext-csv-perl (2.04-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:arm64 (2:1.1.1-1) ...
Setting up libparams-validationcompiler-perl (0.31-1) ...
Setting up liblapack3:arm64 (3.12.0-3+b1) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
Setting up libxrender1:arm64 (1:0.9.10-1.1+b2) ...
Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ...
Setting up fontconfig-config (2.15.0-1.1+b1) ...
Setting up liblist-moreutils-perl (0.430-2) ...
Setting up libtest-warn-perl (0.37-2) ...
Setting up libtype-tiny-perl (2.004000-1) ...
Setting up libtest-differences-perl (0.71-1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b2) ...
Setting up libpod-eventual-perl (0.094003-1) ...
Setting up libmodule-runtime-conflicts-perl (0.003-2) ...
Setting up libio-all-perl (0.87-2) ...
Setting up libclass-c3-perl (0.35-2) ...
Setting up libgraph-perl (1:0.9729-1) ...
Setting up libtest-files-perl (0.26-1) ...
Setting up libstring-errf-perl (0.009-1) ...
Setting up libthai0:arm64 (0.1.29-2+b1) ...
Setting up libmbedx509-7:arm64 (3.6.2-3) ...
Setting up libtest-exception-perl (0.43-3) ...
Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ...
Setting up mcl (1:22-282+ds-2+b1) ...
Setting up libppi-perl (1.279-1) ...
Setting up parallel (20240222+ds-2) ...
Setting up libmbedtls21:arm64 (3.6.2-3) ...
Setting up libgetopt-long-descriptive-perl (0.115-1) ...
Setting up cpp-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libnsl2:arm64 (1.3.0-3+b3) ...
Setting up libc6-dev:arm64 (2.40-3) ...
Setting up libharfbuzz0b:arm64 (10.0.1-1) ...
Setting up libxss1:arm64 (1:1.2.3-1+b2) ...
Setting up libfontconfig1:arm64 (2.15.0-1.1+b1) ...
Setting up libmro-compat-perl (0.15-2) ...
Setting up libgcc-14-dev:arm64 (14.2.0-8) ...
Setting up libstdc++-14-dev:arm64 (14.2.0-8) ...
Setting up libsm6:arm64 (2:1.2.4-1) ...
Setting up fontconfig (2.15.0-1.1+b1) ...
Regenerating fonts cache... done.
Setting up libxft2:arm64 (2.3.6-1+b2) ...
Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ...
Setting up libtest-most-perl (0.38-1) ...
Setting up libgraph-readwrite-perl (2.10-1) ...
Setting up libapp-cmd-perl (0.336-1) ...
Setting up libtk8.6:arm64 (8.6.15-1) ...
Setting up python3.12 (3.12.7-3) ...
Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libperl-prereqscanner-perl (1.100-1) ...
Setting up libcpan-uploader-perl (0.103018-1) ...
Setting up libcairo2:arm64 (1.18.2-2) ...
Setting up libspecio-perl (0.48-1) ...
Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libxt6t64:arm64 (1:1.2.1-1.2+b1) ...
Setting up cpp-14 (14.2.0-8) ...
Setting up cpp (4:14.2.0-1) ...
Setting up libdata-section-perl (0.200008-1) ...
Setting up libdevel-overloadinfo-perl (0.007-1) ...
Setting up liblog-dispatch-perl (2.71-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libdatetime-locale-perl (1:1.41-1) ...
Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ...
Setting up libpython3-stdlib:arm64 (3.12.7-1) ...
Setting up bioperl (1.7.8-1) ...
Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libmoose-perl:arm64 (2.2207-1+b2) ...
Setting up libdatetime-timezone-perl (1:2.63-2+2024b) ...
Setting up libmoosex-types-perl (0.50-2) ...
Setting up python3 (3.12.7-1) ...
Setting up libsoftware-license-perl (0.104006-1) ...
Setting up gcc-14 (14.2.0-8) ...
Setting up ncbi-blast+ (2.16.0+ds-6+b1) ...
Setting up libmoosex-lazyrequire-perl (0.11-2) ...
Setting up r-base-core (4.4.2-1) ...

Creating config file /etc/R/Renviron with new version
Setting up libmoosex-setonce-perl (0.200002-2) ...
Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up liblog-dispatch-array-perl (1.005-1) ...
Setting up g++-14 (14.2.0-8) ...
Setting up librole-identifiable-perl (0.009-1) ...
Setting up libdatetime-perl (2:1.65-1+b2) ...
Setting up libmoosex-role-parameterized-perl (1.11-2) ...
Setting up libpod-elemental-perl (0.103006-1) ...
Setting up libmoose-autobox-perl (0.16-2) ...
Setting up libtool (2.4.7-8) ...
Setting up libmoosex-types-perl-perl (0.101344-1) ...
Setting up librole-hasmessage-perl (0.007-1) ...
Setting up libmoosex-oneargnew-perl (0.007-1) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up liblog-dispatchouli-perl (3.008-1) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up libconfig-mvp-perl (2.200013-1) ...
Setting up libpod-elemental-perlmunger-perl (0.200007-1) ...
Setting up debhelper (13.20) ...
Setting up libconfig-mvp-reader-ini-perl (2.101465-1) ...
Setting up libdist-zilla-perl (6.032-1) ...
Setting up libpod-weaver-perl (4.020-1) ...
Setting up libdist-zilla-plugin-podweaver-perl (4.010-1) ...
Setting up dh-dist-zilla (1.4.1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in all)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
Package versions: appstream_1.0.3-1+b1 apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 bedtools_2.31.1+dfsg-2+b1 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bioperl_1.7.8-1 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 cd-hit_4.8.1-4+b1 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-aarch64-linux-gnu_14.2.0-8 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9+b1 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-dist-zilla_1.4.1 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1+b1 diffutils_1:3.10-1+b1 dpkg_1.22.12~1.gbp82cafd dpkg-dev_1.22.12~1.gbp82cafd dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 fasttree_2.1.11-2+b1 file_1:5.45-3+b1 findutils_4.10.0-3 fontconfig_2.15.0-1.1+b1 fontconfig-config_2.15.0-1.1+b1 fonts-dejavu-core_2.37-8 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libexception-class-perl_1.45-1 libexpat1_2.6.4-1 libexporter-tiny-perl_1.006002-1 libext2fs2t64_1.47.1-1+b1 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-basedir-perl_0.09-2 libfile-chdir-perl_0.1008-1.2 libfile-copy-recursive-perl_0.45-4 libfile-find-rule-perl_0.34-3 libfile-grep-perl_0.02-3 libfile-listing-perl_6.16-1 libfile-pushd-perl_1.016-2 libfile-sharedir-install-perl_0.14-2 libfile-sharedir-perl_1.118-3 libfile-slurper-perl_0.014-1 libfile-stripnondeterminism-perl_1.14.0-1 libfile-which-perl_1.27-2 libfindbin-libs-perl_3.0.2-1 libfont-ttf-perl_1.06-2 libfontconfig1_2.15.0-1.1+b1 libfreetype6_2.13.3+dfsg-1 libfribidi0_1.0.15-1 libgcc-14-dev_14.2.0-8 libgcc-s1_14.2.0-8 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgetopt-long-descriptive-perl_0.115-1 libgfortran5_14.2.0-8 libglib2.0-0t64_2.82.2-3 libgmp10_2:6.3.0+dfsg-2+b2 libgnutls30t64_3.8.8-2 libgomp1_14.2.0-8 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgraph-perl_1:0.9729-1 libgraph-readwrite-perl_2.10-1 libgraphite2-3_1.3.14-2+b1 libgssapi-krb5-2_1.21.3-3 libharfbuzz0b_10.0.1-1 libhash-merge-simple-perl_0.052-1 libheap-perl_0.80-5 libhogweed6t64_3.10-1+b1 libhtml-form-perl_6.12-1 libhtml-html5-entities-perl_0.004-3 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tokeparser-simple-perl_3.16-4 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_7.00-2 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-8 libice6_2:1.1.1-1 libicu72_72.1-5+b1 libidn2-0_2.3.7-2+b1 libimport-into-perl_1.002005-2 libio-all-perl_0.87-2 libio-html-perl_1.004-3 libio-interactive-perl_1.025-1 libio-socket-ssl-perl_2.089-1 libio-string-perl_1.08-4 libio-stringy-perl_2.113-2 libio-tiecombine-perl_1.005-3 libipc-run3-perl_0.049-1 libipc-system-simple-perl_1.30-2 libisl23_0.27-1 libiterator-perl_0.03+ds1-2 libiterator-util-perl_0.02+ds1-2 libitm1_14.2.0-8 libjansson4_2.14-2+b3 libjbig0_2.1-6.1+b2 libjpeg62-turbo_1:2.1.5-3+b1 libjson-maybexs-perl_1.004008-1 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netbase_6.4 openssl_3.3.2-2 openssl-provider-legacy_3.3.2-2 parallel_20240222+ds-2 passwd_1:4.16.0-5 patch_2.7.6-7+b1 patchutils_0.4.2-1+b1 perl_5.40.0-7 perl-base_5.40.0-7 perl-modules-5.40_5.40.0-7 perl-openssl-defaults_7+b2 plzip_1.11-2 po-debconf_1.0.21+nmu1 prank_0.0.170427+dfsg-3+b1 procps_2:4.0.4-6 python3_3.12.7-1 python3-minimal_3.12.7-1 python3.12_3.12.7-3 python3.12-minimal_3.12.7-3 r-base-core_4.4.2-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1+b1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2+b1 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysstat_12.7.5-2+b1 sysvinit-utils_3.11-1 t1utils_1.41-4+b1 tar_1.35+dfsg-3+b1 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28+b1 util-linux_2.40.2-11 x11-common_1:7.7+23.1 xdg-utils_1.1.3-4.1 xz-utils_5.6.3-1+b1 zip_3.0-14+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 3.0 (quilt)
Source: roary
Binary: roary
Architecture: all
Version: 3.13.0+dfsg-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Sascha Steinbiss <satta@debian.org>
Homepage: http://sanger-pathogens.github.io/Roary/
Standards-Version: 4.4.1
Vcs-Browser: https://salsa.debian.org/med-team/roary
Vcs-Git: https://salsa.debian.org/med-team/roary.git
Testsuite: autopkgtest
Build-Depends: debhelper (>= 12~), dh-dist-zilla, libdist-zilla-plugin-podweaver-perl, bioperl (>= 1.7.4), libarray-utils-perl, libenv-path-perl, libexception-class-perl, libfile-find-rule-perl, libfile-grep-perl, libfile-slurper-perl, libfile-which-perl, libfindbin-libs-perl, libgraph-perl, libgraph-readwrite-perl, liblog-log4perl-perl, libmoose-perl, libperlio-utf8-strict-perl, libtest-most-perl, libtest-file-perl, libtest-files-perl, libtest-output-perl, libtext-csv-perl, bedtools, cd-hit, ncbi-blast+, mcl, parallel, prank, r-base-core, mafft, fasttree
Build-Depends-Indep: perl
Package-List:
 roary deb science optional arch=all
Checksums-Sha1:
 ec41e9813412b1e168328131cabc91ae1ea06162 207348 roary_3.13.0+dfsg.orig.tar.xz
 00f683879e2465a2f91d2214d806d3209ace2dcd 6612 roary_3.13.0+dfsg-1.debian.tar.xz
Checksums-Sha256:
 5450fe6f4bab8b27829d2ec6836c0a8c9a38d42b3891fab29b10a9587dee2fd1 207348 roary_3.13.0+dfsg.orig.tar.xz
 f316c055c6c368084b80133c39749d78c70f229ecb1e5a8134ee35c4e7d1e830 6612 roary_3.13.0+dfsg-1.debian.tar.xz
Files:
 fe3935332843c9d4dfb4d4c5cb9080a6 207348 roary_3.13.0+dfsg.orig.tar.xz
 5e189111d062819d48d66eff830c7c36 6612 roary_3.13.0+dfsg-1.debian.tar.xz

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gpgv: Signature made Fri Nov  8 13:51:49 2019 UTC
gpgv:                using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./roary_3.13.0+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting roary in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking roary_3.13.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking roary_3.13.0+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying rename_R_script.patch
dpkg-source: info: applying use-dz-starter.patch
dpkg-source: info: applying use-debian-perl-path.patch
dpkg-source: info: applying new-bioperl-require.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package roary
dpkg-buildpackage: info: source version 3.13.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Sascha Steinbiss <satta@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --with dist-zilla
   dh_dzil_clean
   dh_clean
 debian/rules binary
dh binary --with dist-zilla
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_dzil_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mv bin/create_pan_genome_plots.R bin/create_pan_genome_plots
dh_dzil_build --
[DZ] beginning to build Bio-Roary
[DZ] writing Bio-Roary in .build/debian-build
[DZ] built in .build/debian-build
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_configure -D .build/debian-build
	cd .build/debian-build && /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro"
Warning: prerequisite Digest::MD5::File 0 not found.
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for Bio::Roary
Writing MYMETA.yml and MYMETA.json
   dh_auto_build -D .build/debian-build
	cd .build/debian-build && make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>/.build/debian-build'
cp lib/Bio/Roary/CommandLine/RoaryCoreAlignment.pm blib/lib/Bio/Roary/CommandLine/RoaryCoreAlignment.pm
cp lib/Bio/Roary/Exceptions.pm blib/lib/Bio/Roary/Exceptions.pm
cp lib/Bio/Roary/ClustersRole.pm blib/lib/Bio/Roary/ClustersRole.pm
cp lib/Bio/Roary.pm blib/lib/Bio/Roary.pm
cp lib/Bio/Roary/ChunkFastaFile.pm blib/lib/Bio/Roary/ChunkFastaFile.pm
cp lib/Bio/Roary/BedFromGFFRole.pm blib/lib/Bio/Roary/BedFromGFFRole.pm
cp lib/Bio/Roary/CommandLine/Common.pm blib/lib/Bio/Roary/CommandLine/Common.pm
cp lib/Bio/Roary/AccessoryClustering.pm blib/lib/Bio/Roary/AccessoryClustering.pm
cp lib/Bio/Roary/AnnotateGroups.pm blib/lib/Bio/Roary/AnnotateGroups.pm
cp lib/Bio/Roary/CommandLine/AssemblyStatistics.pm blib/lib/Bio/Roary/CommandLine/AssemblyStatistics.pm
cp lib/Bio/Roary/External/Cdhit.pm blib/lib/Bio/Roary/External/Cdhit.pm
cp lib/Bio/Roary/CommandLine/QueryRoary.pm blib/lib/Bio/Roary/CommandLine/QueryRoary.pm
cp lib/Bio/Roary/CommandLine/GeneAlignmentFromNucleotides.pm blib/lib/Bio/Roary/CommandLine/GeneAlignmentFromNucleotides.pm
cp lib/Bio/Roary/External/Blastp.pm blib/lib/Bio/Roary/External/Blastp.pm
cp lib/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.pm blib/lib/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.pm
cp lib/Bio/Roary/CommandLine/CreatePanGenome.pm blib/lib/Bio/Roary/CommandLine/CreatePanGenome.pm
cp lib/Bio/Roary/CommandLine/ExtractProteomeFromGff.pm blib/lib/Bio/Roary/CommandLine/ExtractProteomeFromGff.pm
cp lib/Bio/Roary/AccessoryBinaryFasta.pm blib/lib/Bio/Roary/AccessoryBinaryFasta.pm
cp lib/Bio/Roary/CommandLine/UniqueGenesPerSample.pm blib/lib/Bio/Roary/CommandLine/UniqueGenesPerSample.pm
cp lib/Bio/Roary/AssemblyStatistics.pm blib/lib/Bio/Roary/AssemblyStatistics.pm
cp lib/Bio/Roary/CommandLine/IterativeCdhit.pm blib/lib/Bio/Roary/CommandLine/IterativeCdhit.pm
cp lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm blib/lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm
cp lib/Bio/Roary/CommandLine/Roary.pm blib/lib/Bio/Roary/CommandLine/Roary.pm
cp lib/Bio/Roary/CommandLine/RoaryReorderSpreadsheet.pm blib/lib/Bio/Roary/CommandLine/RoaryReorderSpreadsheet.pm
cp lib/Bio/Roary/External/CheckTools.pm blib/lib/Bio/Roary/External/CheckTools.pm
cp lib/Bio/Roary/CommandLine/TransferAnnotationToGroups.pm blib/lib/Bio/Roary/CommandLine/TransferAnnotationToGroups.pm
cp lib/Bio/Roary/CombinedProteome.pm blib/lib/Bio/Roary/CombinedProteome.pm
cp lib/Bio/Roary/AnalyseGroups.pm blib/lib/Bio/Roary/AnalyseGroups.pm
cp lib/Bio/Roary/CommandLine/RoaryPostAnalysis.pm blib/lib/Bio/Roary/CommandLine/RoaryPostAnalysis.pm
cp lib/Bio/Roary/Output/GroupMultifasta.pm blib/lib/Bio/Roary/Output/GroupMultifasta.pm
cp lib/Bio/Roary/External/Mcl.pm blib/lib/Bio/Roary/External/Mcl.pm
cp lib/Bio/Roary/External/Mafft.pm blib/lib/Bio/Roary/External/Mafft.pm
cp lib/Bio/Roary/JobRunner/Local.pm blib/lib/Bio/Roary/JobRunner/Local.pm
cp lib/Bio/Roary/Output/EMBLHeaderCommon.pm blib/lib/Bio/Roary/Output/EMBLHeaderCommon.pm
cp lib/Bio/Roary/IterativeCdhit.pm blib/lib/Bio/Roary/IterativeCdhit.pm
cp lib/Bio/Roary/External/GeneAlignmentFromNucleotides.pm blib/lib/Bio/Roary/External/GeneAlignmentFromNucleotides.pm
cp lib/Bio/Roary/GeneNamesFromGFF.pm blib/lib/Bio/Roary/GeneNamesFromGFF.pm
cp lib/Bio/Roary/Output/CoreGeneAlignmentCoordinatesEMBL.pm blib/lib/Bio/Roary/Output/CoreGeneAlignmentCoordinatesEMBL.pm
cp lib/Bio/Roary/FilterFullClusters.pm blib/lib/Bio/Roary/FilterFullClusters.pm
cp lib/Bio/Roary/JobRunner/Parallel.pm blib/lib/Bio/Roary/JobRunner/Parallel.pm
cp lib/Bio/Roary/InflateClusters.pm blib/lib/Bio/Roary/InflateClusters.pm
cp lib/Bio/Roary/External/IterativeCdhit.pm blib/lib/Bio/Roary/External/IterativeCdhit.pm
cp lib/Bio/Roary/External/Fasttree.pm blib/lib/Bio/Roary/External/Fasttree.pm
cp lib/Bio/Roary/OrderGenes.pm blib/lib/Bio/Roary/OrderGenes.pm
cp lib/Bio/Roary/Output/DifferenceBetweenSets.pm blib/lib/Bio/Roary/Output/DifferenceBetweenSets.pm
cp lib/Bio/Roary/JobRunner/Role.pm blib/lib/Bio/Roary/JobRunner/Role.pm
cp lib/Bio/Roary/External/Makeblastdb.pm blib/lib/Bio/Roary/External/Makeblastdb.pm
cp lib/Bio/Roary/GroupLabels.pm blib/lib/Bio/Roary/GroupLabels.pm
cp lib/Bio/Roary/ExtractProteomeFromGFFs.pm blib/lib/Bio/Roary/ExtractProteomeFromGFFs.pm
cp lib/Bio/Roary/FilterUnknownsFromFasta.pm blib/lib/Bio/Roary/FilterUnknownsFromFasta.pm
cp lib/Bio/Roary/Output/EmblGroups.pm blib/lib/Bio/Roary/Output/EmblGroups.pm
cp lib/Bio/Roary/LookupGeneFiles.pm blib/lib/Bio/Roary/LookupGeneFiles.pm
cp lib/Bio/Roary/ExtractCoreGenesFromSpreadsheet.pm blib/lib/Bio/Roary/ExtractCoreGenesFromSpreadsheet.pm
cp lib/Bio/Roary/MergeMultifastaAlignments.pm blib/lib/Bio/Roary/MergeMultifastaAlignments.pm
cp lib/Bio/Roary/External/Prank.pm blib/lib/Bio/Roary/External/Prank.pm
cp lib/Bio/Roary/GroupStatistics.pm blib/lib/Bio/Roary/GroupStatistics.pm
cp lib/Bio/Roary/External/PostAnalysis.pm blib/lib/Bio/Roary/External/PostAnalysis.pm
cp lib/Bio/Roary/Output/BlastIdentityFrequency.pm blib/lib/Bio/Roary/Output/BlastIdentityFrequency.pm
cp lib/Bio/Roary/ExtractProteomeFromGFF.pm blib/lib/Bio/Roary/ExtractProteomeFromGFF.pm
cp lib/Bio/Roary/UniqueGenesPerSample.pm blib/lib/Bio/Roary/UniqueGenesPerSample.pm
cp lib/Bio/Roary/Output/GroupsMultifastaProtein.pm blib/lib/Bio/Roary/Output/GroupsMultifastaProtein.pm
cp lib/Bio/Roary/SplitGroups.pm blib/lib/Bio/Roary/SplitGroups.pm
cp lib/Bio/Roary/Output/GroupsMultifastasNucleotide.pm blib/lib/Bio/Roary/Output/GroupsMultifastasNucleotide.pm
cp lib/Bio/Roary/ReorderSpreadsheet.pm blib/lib/Bio/Roary/ReorderSpreadsheet.pm
cp lib/Bio/Roary/Output/GroupsMultifastas.pm blib/lib/Bio/Roary/Output/GroupsMultifastas.pm
cp lib/Bio/Roary/ParallelAllAgainstAllBlast.pm blib/lib/Bio/Roary/ParallelAllAgainstAllBlast.pm
cp lib/Bio/Roary/SampleOrder.pm blib/lib/Bio/Roary/SampleOrder.pm
cp lib/Bio/Roary/SpreadsheetRole.pm blib/lib/Bio/Roary/SpreadsheetRole.pm
cp lib/Bio/Roary/PresenceAbsenceMatrix.pm blib/lib/Bio/Roary/PresenceAbsenceMatrix.pm
cp lib/Bio/Roary/PrepareInputFiles.pm blib/lib/Bio/Roary/PrepareInputFiles.pm
cp lib/Bio/Roary/Output/GroupsMultifastaNucleotide.pm blib/lib/Bio/Roary/Output/GroupsMultifastaNucleotide.pm
cp lib/Bio/Roary/Output/NumberOfGroups.pm blib/lib/Bio/Roary/Output/NumberOfGroups.pm
cp lib/Bio/Roary/QC/Report.pm blib/lib/Bio/Roary/QC/Report.pm
cp lib/Bio/Roary/SequenceLengths.pm blib/lib/Bio/Roary/SequenceLengths.pm
cp lib/Bio/Roary/ReformatInputGFFs.pm blib/lib/Bio/Roary/ReformatInputGFFs.pm
cp lib/Bio/Roary/PostAnalysis.pm blib/lib/Bio/Roary/PostAnalysis.pm
cp lib/Bio/Roary/Output/QueryGroups.pm blib/lib/Bio/Roary/Output/QueryGroups.pm
cp lib/Bio/Roary/ParseGFFAnnotationRole.pm blib/lib/Bio/Roary/ParseGFFAnnotationRole.pm
cp lib/Bio/Roary/SortFasta.pm blib/lib/Bio/Roary/SortFasta.pm
cp bin/create_pan_genome blib/script/create_pan_genome
cp bin/create_pan_genome_plots blib/script/create_pan_genome_plots
cp bin/extract_proteome_from_gff blib/script/extract_proteome_from_gff
cp bin/iterative_cdhit blib/script/iterative_cdhit
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/create_pan_genome_plots
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/create_pan_genome
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/extract_proteome_from_gff
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/iterative_cdhit
cp bin/pan_genome_assembly_statistics blib/script/pan_genome_assembly_statistics
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/pan_genome_assembly_statistics
cp bin/pan_genome_core_alignment blib/script/pan_genome_core_alignment
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/pan_genome_core_alignment
cp bin/pan_genome_post_analysis blib/script/pan_genome_post_analysis
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/pan_genome_post_analysis
cp bin/pan_genome_reorder_spreadsheet blib/script/pan_genome_reorder_spreadsheet
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/pan_genome_reorder_spreadsheet
cp bin/parallel_all_against_all_blastp blib/script/parallel_all_against_all_blastp
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/parallel_all_against_all_blastp
cp bin/protein_alignment_from_nucleotides blib/script/protein_alignment_from_nucleotides
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/protein_alignment_from_nucleotides
cp bin/query_pan_genome blib/script/query_pan_genome
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/query_pan_genome
cp bin/roary blib/script/roary
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/roary
cp bin/roary-create_pan_genome_plots.R blib/script/roary-create_pan_genome_plots.R
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/roary-create_pan_genome_plots.R
cp bin/roary-pan_genome_reorder_spreadsheet blib/script/roary-pan_genome_reorder_spreadsheet
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/roary-pan_genome_reorder_spreadsheet
cp bin/roary-query_pan_genome blib/script/roary-query_pan_genome
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/roary-query_pan_genome
cp bin/roary-unique_genes_per_sample blib/script/roary-unique_genes_per_sample
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/roary-unique_genes_per_sample
cp bin/transfer_annotation_to_groups blib/script/transfer_annotation_to_groups
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/transfer_annotation_to_groups
Manifying 16 pod documents
Manifying 26 pod documents
Manifying 28 pod documents
Manifying 25 pod documents
make[1]: Leaving directory '/<<PKGBUILDDIR>>/.build/debian-build'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Hmmm, seems the test is not automatically run anyway by the build system
dh_auto_test || true
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   dh_auto_install -D .build/debian-build --destdir=debian/roary/
	cd .build/debian-build && make -j4 install DESTDIR=/<<BUILDDIR>>/roary-3.13.0\+dfsg/debian/roary AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/<<PKGBUILDDIR>>/.build/debian-build'
Manifying 16 pod documents
Manifying 26 pod documents
Manifying 28 pod documents
Manifying 25 pod documents
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/PresenceAbsenceMatrix.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ReorderSpreadsheet.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/MergeMultifastaAlignments.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/AnalyseGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/SpreadsheetRole.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/AccessoryBinaryFasta.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/GeneNamesFromGFF.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/GroupLabels.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ExtractProteomeFromGFF.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/PrepareInputFiles.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/AssemblyStatistics.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ExtractProteomeFromGFFs.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ReformatInputGFFs.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/SortFasta.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ContigsToGeneIDsFromGFF.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/FilterUnknownsFromFasta.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ParallelAllAgainstAllBlast.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/UniqueGenesPerSample.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/BedFromGFFRole.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/AnnotateGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/LookupGeneFiles.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ChunkFastaFile.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ExtractCoreGenesFromSpreadsheet.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ParseGFFAnnotationRole.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/OrderGenes.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/SplitGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/SequenceLengths.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/IterativeCdhit.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CombinedProteome.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/AccessoryClustering.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Exceptions.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/FilterFullClusters.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/ClustersRole.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/PostAnalysis.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/InflateClusters.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/GroupStatistics.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/SampleOrder.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/JobRunner/Role.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/JobRunner/Parallel.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/JobRunner/Local.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/RoaryCoreAlignment.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/QueryRoary.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/AssemblyStatistics.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/ExtractProteomeFromGff.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/RoaryReorderSpreadsheet.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/UniqueGenesPerSample.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/RoaryPostAnalysis.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/TransferAnnotationToGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/Common.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/GeneAlignmentFromNucleotides.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/Roary.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/IterativeCdhit.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/CommandLine/CreatePanGenome.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/DifferenceBetweenSets.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/NumberOfGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/GroupsMultifastas.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/GroupMultifasta.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/QueryGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/EmblGroups.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/CoreGeneAlignmentCoordinatesEMBL.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/GroupsMultifastaNucleotide.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/EMBLHeaderCommon.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/GroupsMultifastaProtein.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/GroupsMultifastasNucleotide.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/Output/BlastIdentityFrequency.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/QC/Report.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/CheckTools.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Fasttree.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Cdhit.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Blastp.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Prank.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Mcl.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Makeblastdb.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/GeneAlignmentFromNucleotides.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/Mafft.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/IterativeCdhit.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/perl5/Bio/Roary/External/PostAnalysis.pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/pan_genome_reorder_spreadsheet.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/roary-unique_genes_per_sample.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/query_pan_genome.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/pan_genome_assembly_statistics.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/extract_proteome_from_gff.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/pan_genome_core_alignment.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/pan_genome_post_analysis.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/roary.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/protein_alignment_from_nucleotides.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/transfer_annotation_to_groups.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/iterative_cdhit.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/roary-pan_genome_reorder_spreadsheet.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/roary-query_pan_genome.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/parallel_all_against_all_blastp.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/create_pan_genome.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man1/create_pan_genome_plots.1p
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::GroupMultifasta.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::SequenceLengths.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Fasttree.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::PostAnalysis.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::IterativeCdhit.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::EMBLHeaderCommon.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::GeneAlignmentFromNucleotides.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ChunkFastaFile.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::NumberOfGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ReorderSpreadsheet.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::CreatePanGenome.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::DifferenceBetweenSets.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::GroupsMultifastasNucleotide.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::UniqueGenesPerSample.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::QueryRoary.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::GroupStatistics.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::GroupsMultifastas.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::OrderGenes.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::CheckTools.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::JobRunner::Role.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::LookupGeneFiles.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::SplitGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::ParallelAllAgainstAllBlastp.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::QueryGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ClustersRole.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::Common.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CombinedProteome.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::UniqueGenesPerSample.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ContigsToGeneIDsFromGFF.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Makeblastdb.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::AssemblyStatistics.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::PrepareInputFiles.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::JobRunner::Local.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ExtractProteomeFromGFF.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::BedFromGFFRole.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::ExtractProteomeFromGff.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::RoaryReorderSpreadsheet.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::GroupsMultifastaNucleotide.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::BlastIdentityFrequency.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::MergeMultifastaAlignments.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::SpreadsheetRole.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::RoaryCoreAlignment.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::GroupLabels.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::IterativeCdhit.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::PostAnalysis.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::EmblGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ExtractProteomeFromGFFs.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::SampleOrder.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::GeneAlignmentFromNucleotides.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::AnalyseGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ExtractCoreGenesFromSpreadsheet.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::PresenceAbsenceMatrix.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Mcl.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Mafft.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Cdhit.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::QC::Report.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::AssemblyStatistics.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::AccessoryBinaryFasta.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::GroupsMultifastaProtein.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::FilterUnknownsFromFasta.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ParseGFFAnnotationRole.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::RoaryPostAnalysis.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::InflateClusters.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::AnnotateGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::TransferAnnotationToGroups.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::JobRunner::Parallel.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Prank.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::GeneNamesFromGFF.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::External::Blastp.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::SortFasta.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ParallelAllAgainstAllBlast.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Output::CoreGeneAlignmentCoordinatesEMBL.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::Roary.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::AccessoryClustering.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::ReformatInputGFFs.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::FilterFullClusters.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::CommandLine::IterativeCdhit.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/share/man/man3/Bio::Roary::Exceptions.3pm
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/iterative_cdhit
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/extract_proteome_from_gff
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/roary-unique_genes_per_sample
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/roary-query_pan_genome
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/protein_alignment_from_nucleotides
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/transfer_annotation_to_groups
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/pan_genome_assembly_statistics
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/create_pan_genome
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/roary
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/query_pan_genome
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/pan_genome_reorder_spreadsheet
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/create_pan_genome_plots
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/parallel_all_against_all_blastp
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/pan_genome_core_alignment
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/roary-create_pan_genome_plots.R
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/roary-pan_genome_reorder_spreadsheet
Installing /<<PKGBUILDDIR>>/debian/roary/usr/bin/pan_genome_post_analysis
make[1]: Leaving directory '/<<PKGBUILDDIR>>/.build/debian-build'
   dh_installdocs
   dh_installchangelogs
   dh_installman
   dh_lintian
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   dh_missing
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'roary' in '../roary_3.13.0+dfsg-1_all.deb'.
 dpkg-genbuildinfo --build=binary -O../roary_3.13.0+dfsg-1_arm64.buildinfo
 dpkg-genchanges --build=binary -O../roary_3.13.0+dfsg-1_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-18T10:51:22Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


roary_3.13.0+dfsg-1_arm64.changes:
----------------------------------

Format: 1.8
Date: Fri, 08 Nov 2019 14:37:07 +0100
Source: roary
Binary: roary
Architecture: all
Version: 3.13.0+dfsg-1
Distribution: sid
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 roary      - high speed stand alone pan genome pipeline
Changes:
 roary (3.13.0+dfsg-1) unstable; urgency=medium
 .
   * New upstream release.
   * Use debhelper 12.
   * Bump Standards-Version.
   * Update source lintian override location and tags.
Checksums-Sha1:
 d98d02d7ee7612a8d5c9f9bf8c6f0786aba8c4b3 172956 roary_3.13.0+dfsg-1_all.deb
 7bec5e1bafe4f85b094e56ccb484f4ac3769bbcc 14443 roary_3.13.0+dfsg-1_arm64.buildinfo
Checksums-Sha256:
 407c586f74905ca1cd02fa839d4f37a5975f5f0fb0e1a730dd4949f3f62a08c3 172956 roary_3.13.0+dfsg-1_all.deb
 2f3cf59d0defd78a628ddbb9cf74700e9fbbfc9ea858ad266f7cd4592951767d 14443 roary_3.13.0+dfsg-1_arm64.buildinfo
Files:
 af01483d1d735e74de6bd65123abd903 172956 science optional roary_3.13.0+dfsg-1_all.deb
 b6169be9314515f7de4a25e019b45b6a 14443 science optional roary_3.13.0+dfsg-1_arm64.buildinfo

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: roary
Binary: roary
Architecture: all
Version: 3.13.0+dfsg-1
Checksums-Md5:
 af01483d1d735e74de6bd65123abd903 172956 roary_3.13.0+dfsg-1_all.deb
Checksums-Sha1:
 d98d02d7ee7612a8d5c9f9bf8c6f0786aba8c4b3 172956 roary_3.13.0+dfsg-1_all.deb
Checksums-Sha256:
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Mon, 18 Nov 2024 10:51:22 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
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 automake (= 1:1.16.5-1.3),
 autopoint (= 0.22.5-2),
 autotools-dev (= 20220109.1),
 base-files (= 13.5),
 base-passwd (= 3.6.5),
 bash (= 5.2.32-1+b2),
 bedtools (= 2.31.1+dfsg-2+b1),
 binutils (= 2.43.1-5),
 binutils-aarch64-linux-gnu (= 2.43.1-5),
 binutils-common (= 2.43.1-5),
 bioperl (= 1.7.8-1),
 bsdextrautils (= 2.40.2-11),
 bsdutils (= 1:2.40.2-11),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6),
 ca-certificates (= 20240203),
 cd-hit (= 4.8.1-4+b1),
 coreutils (= 9.5-1+b1),
 cpp (= 4:14.2.0-1),
 cpp-14 (= 14.2.0-8),
 cpp-14-aarch64-linux-gnu (= 14.2.0-8),
 cpp-aarch64-linux-gnu (= 4:14.2.0-1),
 dash (= 0.5.12-9+b1),
 debconf (= 1.5.87),
 debhelper (= 13.20),
 debianutils (= 5.21),
 dh-autoreconf (= 20),
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 dpkg (= 1.22.12~1.gbp82cafd),
 dpkg-dev (= 1.22.12~1.gbp82cafd),
 dwz (= 0.15-1+b1),
 fasttree (= 2.1.11-2+b1),
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 findutils (= 4.10.0-3),
 fontconfig (= 2.15.0-1.1+b1),
 fontconfig-config (= 2.15.0-1.1+b1),
 fonts-dejavu-core (= 2.37-8),
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 g++ (= 4:14.2.0-1),
 g++-14 (= 14.2.0-8),
 g++-14-aarch64-linux-gnu (= 14.2.0-8),
 g++-aarch64-linux-gnu (= 4:14.2.0-1),
 gcc (= 4:14.2.0-1),
 gcc-14 (= 14.2.0-8),
 gcc-14-aarch64-linux-gnu (= 14.2.0-8),
 gcc-14-base (= 14.2.0-8),
 gcc-aarch64-linux-gnu (= 4:14.2.0-1),
 gettext (= 0.22.5-2),
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 grep (= 3.11-4+b1),
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 init-system-helpers (= 1.67),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.2-2+b1),
 libalgorithm-c3-perl (= 0.11-2),
 libalgorithm-diff-perl (= 1.201-1),
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 libapp-cmd-perl (= 0.336-1),
 libarchive-zip-perl (= 1.68-1),
 libarray-utils-perl (= 0.5-3),
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 libaudit1 (= 1:4.0.2-2),
 libautobox-perl (= 3.0.2-1+b1),
 libb-hooks-endofscope-perl (= 0.28-1),
 libb-hooks-op-check-perl (= 0.22-3+b2),
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 libbrotli1 (= 1.1.0-2+b6),
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 libbz2-1.0 (= 1.0.8-6),
 libc-bin (= 2.40-3),
 libc-dev-bin (= 2.40-3),
 libc6 (= 2.40-3),
 libc6-dev (= 2.40-3),
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 libcapture-tiny-perl (= 0.48-2),
 libcarp-clan-perl (= 6.08-2),
 libcc1-0 (= 14.2.0-8),
 libclass-c3-perl (= 0.35-2),
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 libclass-inspector-perl (= 1.36-3),
 libclass-load-perl (= 0.25-2),
 libclass-load-xs-perl (= 0.10-2+b4),
 libclass-method-modifiers-perl (= 2.15-1),
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 libclone-perl (= 0.47-1+b1),
 libcom-err2 (= 1.47.1-1+b1),
 libconfig-ini-perl (= 1:0.029-1),
 libconfig-mvp-perl (= 2.200013-1),
 libconfig-mvp-reader-ini-perl (= 2.101465-1),
 libconst-fast-perl (= 0.014-2),
 libcpan-uploader-perl (= 0.103018-1),
 libcpanel-json-xs-perl (= 4.38-1+b1),
 libcrypt-dev (= 1:4.4.36-5),
 libcrypt1 (= 1:4.4.36-5),
 libctf-nobfd0 (= 2.43.1-5),
 libctf0 (= 2.43.1-5),
 libcurl4t64 (= 8.11.0-1),
 libdata-compare-perl (= 1.29-1),
 libdata-optlist-perl (= 0.114-1),
 libdata-section-perl (= 0.200008-1),
 libdata-stag-perl (= 0.14-3),
 libdatetime-locale-perl (= 1:1.41-1),
 libdatetime-perl (= 2:1.65-1+b2),
 libdatetime-timezone-perl (= 1:2.63-2+2024b),
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 libdb5.3t64 (= 5.3.28+dfsg2-9),
 libdebconfclient0 (= 0.273),
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 libdeflate0 (= 1.22-1),
 libdevel-callchecker-perl (= 0.009-1+b1),
 libdevel-globaldestruction-perl (= 0.14-4),
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 libdevel-stacktrace-perl (= 2.0500-1),
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 libdist-zilla-perl (= 6.032-1),
 libdist-zilla-plugin-podweaver-perl (= 4.010-1),
 libdpkg-perl (= 1.22.12~1.gbp82cafd),
 libdynaloader-functions-perl (= 0.004-1),
 libelf1t64 (= 0.192-4),
 libencode-locale-perl (= 1.05-3),
 libenv-path-perl (= 0.19-4),
 libeval-closure-perl (= 0.14-3),
 libexception-class-perl (= 1.45-1),
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 libexporter-tiny-perl (= 1.006002-1),
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 libfile-pushd-perl (= 1.016-2),
 libfile-sharedir-install-perl (= 0.14-2),
 libfile-sharedir-perl (= 1.118-3),
 libfile-slurper-perl (= 0.014-1),
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 libfile-which-perl (= 1.27-2),
 libfindbin-libs-perl (= 3.0.2-1),
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 libfribidi0 (= 1.0.15-1),
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 libgdbm-compat4t64 (= 1.24-2),
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 libgfortran5 (= 14.2.0-8),
 libglib2.0-0t64 (= 2.82.2-3),
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 libgraph-perl (= 1:0.9729-1),
 libgraph-readwrite-perl (= 2.10-1),
 libgraphite2-3 (= 1.3.14-2+b1),
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 libharfbuzz0b (= 10.0.1-1),
 libhash-merge-simple-perl (= 0.052-1),
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 libhogweed6t64 (= 3.10-1+b1),
 libhtml-parser-perl (= 3.83-1+b1),
 libhtml-tagset-perl (= 3.24-1),
 libhtml-tree-perl (= 5.07-3),
 libhttp-cookies-perl (= 6.11-1),
 libhttp-date-perl (= 6.06-1),
 libhttp-message-perl (= 7.00-2),
 libhttp-negotiate-perl (= 6.01-2),
 libhwasan0 (= 14.2.0-8),
 libice6 (= 2:1.1.1-1),
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 libio-all-perl (= 0.87-2),
 libio-html-perl (= 1.004-3),
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 libio-string-perl (= 1.08-4),
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 libjson-perl (= 4.10000-1),
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 liblog-dispatchouli-perl (= 3.008-1),
 liblog-log4perl-perl (= 1.57-1),
 liblsan0 (= 14.2.0-8),
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 libmodule-implementation-perl (= 0.09-2),
 libmodule-path-perl (= 0.19-3),
 libmodule-pluggable-perl (= 5.2-5),
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 libnamespace-clean-perl (= 0.27-2),
 libncursesw6 (= 6.5-2+b1),
 libnet-http-perl (= 6.23-1),
 libnet-ssleay-perl (= 1.94-2),
 libnettle8t64 (= 3.10-1+b1),
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 libpango-1.0-0 (= 1.54.0+ds-3),
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 libpangoft2-1.0-0 (= 1.54.0+ds-3),
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 libpaper1 (= 1.1.29+b2),
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 libparse-yapp-perl (= 1.21-4),
 libpath-tiny-perl (= 0.146-1),
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 libperl-prereqscanner-perl (= 1.100-1),
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 libpod-weaver-perl (= 4.020-1),
 libppi-perl (= 1.279-1),
 libproc2-0 (= 2:4.0.4-6),
 libpsl5t64 (= 0.21.2-1.1+b1),
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 libsensors-config (= 1:3.6.0-10),
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 libsub-exporter-globexporter-perl (= 0.006-1),
 libsub-exporter-perl (= 0.990-1),
 libsub-exporter-progressive-perl (= 0.001013-3),
 libsub-identify-perl (= 0.14-3+b3),
 libsub-install-perl (= 0.929-1),
 libsub-name-perl (= 0.27-1+b3),
 libsub-quote-perl (= 2.006008-1),
 libsub-uplevel-perl (= 0.2800-3),
 libsyntax-keyword-junction-perl (= 0.003009-1),
 libsystemd0 (= 257~rc2-3),
 libtask-weaken-perl (= 1.06-2),
 libtasn1-6 (= 4.19.0-3+b3),
 libtcl8.6 (= 8.6.15+dfsg-2),
 libterm-encoding-perl (= 0.03-2),
 libterm-readkey-perl (= 2.38-2+b4),
 libtest-deep-perl (= 1.204-1),
 libtest-differences-perl (= 0.71-1),
 libtest-exception-perl (= 0.43-3),
 libtest-file-perl (= 1.993-1),
 libtest-files-perl (= 0.26-1),
 libtest-most-perl (= 0.38-1),
 libtest-output-perl (= 1.034-1),
 libtest-warn-perl (= 0.37-2),
 libtest2-suite-perl (= 0.000163-1),
 libtext-csv-perl (= 2.04-1),
 libtext-diff-perl (= 1.45-2),
 libtext-glob-perl (= 0.11-3),
 libtext-template-perl (= 1.61-1),
 libthai-data (= 0.1.29-2),
 libthai0 (= 0.1.29-2+b1),
 libthrowable-perl (= 1.001-2),
 libtie-ixhash-perl (= 1.23-4),
 libtiff6 (= 4.5.1+git230720-5),
 libtimedate-perl (= 2.3300-2),
 libtinfo6 (= 6.5-2+b1),
 libtingea0 (= 21-361-2+b2),
 libtirpc-common (= 1.3.4+ds-1.3),
 libtirpc3t64 (= 1.3.4+ds-1.3+b1),
 libtk8.6 (= 8.6.15-1),
 libtool (= 2.4.7-8),
 libtry-tiny-perl (= 0.32-1),
 libtsan2 (= 14.2.0-8),
 libtype-tiny-perl (= 2.004000-1),
 libubsan1 (= 14.2.0-8),
 libuchardet0 (= 0.0.8-1+b2),
 libudev1 (= 257~rc2-3),
 libunistring5 (= 1.2-1+b1),
 liburi-perl (= 5.30-1),
 libuuid1 (= 2.40.2-11),
 libuv1t64 (= 1.48.0-7),
 libvariable-magic-perl (= 0.64-1+b1),
 libwebp7 (= 1.4.0-0.1+b1),
 libwww-perl (= 6.77-1),
 libwww-robotrules-perl (= 6.02-1),
 libx11-6 (= 2:1.8.10-2),
 libx11-data (= 2:1.8.10-2),
 libxau6 (= 1:1.0.11-1),
 libxcb-render0 (= 1.17.0-2+b1),
 libxcb-shm0 (= 1.17.0-2+b1),
 libxcb1 (= 1.17.0-2+b1),
 libxdmcp6 (= 1:1.1.2-3+b2),
 libxext6 (= 2:1.3.4-1+b2),
 libxft2 (= 2.3.6-1+b2),
 libxml-parser-perl (= 2.47-1+b3),
 libxml-writer-perl (= 0.900-2),
 libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1),
 libxrender1 (= 1:0.9.10-1.1+b2),
 libxss1 (= 1:1.2.3-1+b2),
 libxstring-perl (= 0.005-2+b4),
 libxt6t64 (= 1:1.2.1-1.2+b1),
 libyaml-tiny-perl (= 1.74-1),
 libzstd1 (= 1.5.6+dfsg-1+b1),
 linux-libc-dev (= 6.11.7-1),
 m4 (= 1.4.19-4),
 mafft (= 7.505-1+b1),
 make (= 4.3-4.1+b1),
 man-db (= 2.13.0-1),
 mawk (= 1.3.4.20240905-1),
 mcl (= 1:22-282+ds-2+b1),
 media-types (= 10.1.0),
 ncbi-blast+ (= 2.16.0+ds-6+b1),
 ncbi-data (= 6.1.20170106+dfsg2-5),
 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2+b1),
 netbase (= 6.4),
 openssl (= 3.3.2-2),
 openssl-provider-legacy (= 3.3.2-2),
 parallel (= 20240222+ds-2),
 patch (= 2.7.6-7+b1),
 perl (= 5.40.0-7),
 perl-base (= 5.40.0-7),
 perl-modules-5.40 (= 5.40.0-7),
 perl-openssl-defaults (= 7+b2),
 po-debconf (= 1.0.21+nmu1),
 prank (= 0.0.170427+dfsg-3+b1),
 procps (= 2:4.0.4-6),
 python3 (= 3.12.7-1),
 python3-minimal (= 3.12.7-1),
 python3.12 (= 3.12.7-3),
 python3.12-minimal (= 3.12.7-3),
 r-base-core (= 4.4.2-1),
 readline-common (= 8.2-5),
 rpcsvc-proto (= 1.4.3-1+b1),
 sed (= 4.9-2+b1),
 sensible-utils (= 0.0.24),
 sysstat (= 12.7.5-2+b1),
 sysvinit-utils (= 3.11-1),
 tar (= 1.35+dfsg-3+b1),
 tzdata (= 2024b-3),
 ucf (= 3.0043+nmu1),
 unzip (= 6.0-28+b1),
 util-linux (= 2.40.2-11),
 x11-common (= 1:7.7+23.1),
 xdg-utils (= 1.1.3-4.1),
 xz-utils (= 5.6.3-1+b1),
 zip (= 3.0-14+b1),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_US.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1573220227"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


roary_3.13.0+dfsg-1_all.deb
---------------------------

 new Debian package, version 2.0.
 size 172956 bytes: control archive=6132 bytes.
    1489 bytes,    19 lines      control
   16882 bytes,   195 lines      md5sums
 Package: roary
 Version: 3.13.0+dfsg-1
 Architecture: all
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 669
 Depends: perl:any, bioperl (>= 1.7.4), libarray-utils-perl, libdigest-md5-file-perl, libenv-path-perl, libexception-class-perl, libfile-find-rule-perl, libfile-grep-perl, libfile-slurper-perl, libfile-which-perl, libfindbin-libs-perl, libgraph-perl, libgraph-readwrite-perl, liblog-log4perl-perl, libmoose-perl, libperlio-utf8-strict-perl, libtest-most-perl, libtest-file-perl, libtest-files-perl, libtest-output-perl, libtext-csv-perl, bedtools, cd-hit, ncbi-blast+, mcl, parallel, prank, r-base-core, r-cran-ggplot2, mafft, fasttree
 Section: science
 Priority: optional
 Homepage: http://sanger-pathogens.github.io/Roary/
 Description: high speed stand alone pan genome pipeline
  Roary is a high speed stand alone pan genome pipeline, which takes annotated
  assemblies in GFF3 format (as produced, for instance, by Prokka) and calculates
  the pan genome. Using a standard desktop PC, it can analyse datasets with
  thousands of samples, something which is computationally infeasible with
  existing methods, without compromising the quality of the results. 128 samples
  can be analysed in under 1 hour using 1 GB of RAM and a single processor.
  To perform this analysis using existing methods would take weeks and hundreds
  of GB of RAM. Roary is not intended for meta-genomics or for comparing
  extremely diverse sets of genomes.

drwxr-xr-x root/root         0 2019-11-08 13:37 ./
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/bin/
-rwxr-xr-x root/root       969 2019-11-08 13:37 ./usr/bin/create_pan_genome
-rwxr-xr-x root/root      3198 2019-11-08 13:37 ./usr/bin/create_pan_genome_plots
-rwxr-xr-x root/root       950 2019-11-08 13:37 ./usr/bin/extract_proteome_from_gff
-rwxr-xr-x root/root       839 2019-11-08 13:37 ./usr/bin/iterative_cdhit
-rwxr-xr-x root/root      1043 2019-11-08 13:37 ./usr/bin/pan_genome_assembly_statistics
-rwxr-xr-x root/root      1157 2019-11-08 13:37 ./usr/bin/pan_genome_core_alignment
-rwxr-xr-x root/root       934 2019-11-08 13:37 ./usr/bin/pan_genome_post_analysis
-rwxr-xr-x root/root      1042 2019-11-08 13:37 ./usr/bin/pan_genome_reorder_spreadsheet
-rwxr-xr-x root/root      1030 2019-11-08 13:37 ./usr/bin/parallel_all_against_all_blastp
-rwxr-xr-x root/root      1109 2019-11-08 13:37 ./usr/bin/protein_alignment_from_nucleotides
-rwxr-xr-x root/root       983 2019-11-08 13:37 ./usr/bin/query_pan_genome
-rwxr-xr-x root/root       848 2019-11-08 13:37 ./usr/bin/roary
-rwxr-xr-x root/root      2832 2019-11-08 13:37 ./usr/bin/roary-create_pan_genome_plots.R
-rwxr-xr-x root/root      1042 2019-11-08 13:37 ./usr/bin/roary-pan_genome_reorder_spreadsheet
-rwxr-xr-x root/root       983 2019-11-08 13:37 ./usr/bin/roary-query_pan_genome
-rwxr-xr-x root/root      1127 2019-11-08 13:37 ./usr/bin/roary-unique_genes_per_sample
-rwxr-xr-x root/root      1097 2019-11-08 13:37 ./usr/bin/transfer_annotation_to_groups
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/share/
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/share/doc/roary/
-rw-r--r-- root/root       546 2019-11-08 13:37 ./usr/share/doc/roary/changelog.Debian.gz
-rw-r--r-- root/root     10620 2019-11-06 10:55 ./usr/share/doc/roary/changelog.gz
-rw-r--r-- root/root      1058 2019-11-08 13:36 ./usr/share/doc/roary/copyright
drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/share/lintian/
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drwxr-xr-x root/root         0 2019-11-08 13:37 ./usr/share/man/man1/
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-rw-r--r-- root/root      1149 2019-11-08 13:37 ./usr/share/man/man1/roary-unique_genes_per_sample.1p.gz
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-rw-r--r-- root/root      1212 2019-11-08 13:37 ./usr/share/man/man3/Bio::Roary::AnalyseGroups.3pm.gz
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-rw-r--r-- root/root      1112 2019-11-08 13:37 ./usr/share/man/man3/Bio::Roary::AssemblyStatistics.3pm.gz
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-rw-r--r-- root/root      1287 2019-11-08 13:37 ./usr/share/man/man3/Bio::Roary::CombinedProteome.3pm.gz
-rw-r--r-- root/root      1123 2019-11-08 13:37 ./usr/share/man/man3/Bio::Roary::CommandLine::AssemblyStatistics.3pm.gz
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-rw-r--r-- root/root      1110 2019-11-08 13:37 ./usr/share/man/man3/Bio::Roary::CommandLine::CreatePanGenome.3pm.gz
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lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1748 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1791 B]
Fetched 4154 B in 0s (338 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ InRelease
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Get:2 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-p19n8m/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-lintian-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 856 B of archives.
After this operation, 0 B of additional disk space will be used.
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Selecting previously unselected package sbuild-build-depends-lintian-dummy.
(Reading database ... 35077 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
E: roary: alien-tag no-upstream-changelog [usr/share/lintian/overrides/roary:2]
W: roary changes: distribution-and-changes-mismatch sid unstable
W: roary: no-manual-page [usr/bin/roary-create_pan_genome_plots.R]

E: Lintian run failed (runtime error)

+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: binary
Build-Space: 10296
Build-Time: 23
Distribution: sid
Host Architecture: arm64
Install-Time: 45
Job: /tmp/debusine-fetch-exec-upload-1faknfh1/roary_3.13.0+dfsg-1.dsc
Lintian: error
Machine Architecture: arm64
Package: roary
Package-Time: 105
Source-Version: 3.13.0+dfsg-1
Space: 10296
Status: successful
Version: 3.13.0+dfsg-1
--------------------------------------------------------------------------------
Finished at 2024-11-18T10:51:22Z
Build needed 00:01:45, 10296k disk space

Relations

Relation Direction Type Name
relates-to Source package roary_3.13.0+dfsg-1
relates-to Binary package dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect_1.22.12~1.gbp82cafd_arm64
relates-to Binary package libdpkg-dev_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg-dev_1.22.12~1.gbp82cafd_all
relates-to Binary package libdpkg-perl_1.22.12~1.gbp82cafd_all
relates-to Binary package roary_3.13.0+dfsg-1_all
relates-to Binary packages roary_3.13.0+dfsg-1

build log System build a package - 1 month, 2 weeks ago 2 weeks, 6 days
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