SeqAn3 3.3.0
The Modern C++ library for sequence analysis.
Loading...
Searching...
No Matches
cigar_operation_table
OP Description
M Alignment match (can be a sequence match or mismatch, used only in basic CIGAR representations)
I Insertion to the reference
D Deletion from the reference
N Skipped region from the reference
S Soft clipping (clipped sequences present in seqan3::sam_record::sequence)
H Hard clipping (clipped sequences NOT present in seqan3::sam_record::sequence)
P Padding (silent deletion from padded reference)
= Sequence match
X Sequence mismatch