#include <transcriptome.hpp>
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| TranscriptPath () |
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| TranscriptPath (const string &transcript_name, const string &embedded_path_name, const bool is_reference_in, const bool is_haplotype_in) |
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| TranscriptPath (const string &transcript_name, const gbwt::size_type &haplotype_gbwt_id, const bool is_reference_in, const bool is_haplotype_in) |
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virtual | ~TranscriptPath () |
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string | get_name () const |
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Data structure that defines a base transcript path.
◆ TranscriptPath() [1/3]
vg::TranscriptPath::TranscriptPath |
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◆ TranscriptPath() [2/3]
vg::TranscriptPath::TranscriptPath |
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const string & |
transcript_name, |
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const string & |
embedded_path_name, |
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const bool |
is_reference_in, |
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const bool |
is_haplotype_in |
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inline |
◆ TranscriptPath() [3/3]
vg::TranscriptPath::TranscriptPath |
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const string & |
transcript_name, |
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const gbwt::size_type & |
haplotype_gbwt_id, |
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const bool |
is_reference_in, |
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const bool |
is_haplotype_in |
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inline |
◆ ~TranscriptPath()
virtual vg::TranscriptPath::~TranscriptPath |
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inlinevirtual |
◆ get_name()
string vg::TranscriptPath::get_name |
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const |
◆ copy_id
uint32_t vg::TranscriptPath::copy_id |
Copy id of transcript path.
◆ embedded_path_names
vector<pair<string, bool> > vg::TranscriptPath::embedded_path_names |
Embedded path names and reference path origin.
◆ haplotype_gbwt_ids
vector<pair<gbwt::size_type, bool> > vg::TranscriptPath::haplotype_gbwt_ids |
Haplotype gbwt ids and reference path origin.
◆ is_haplotype
bool vg::TranscriptPath::is_haplotype |
◆ is_reference
bool vg::TranscriptPath::is_reference |
Is it a reference and/or haplotype-specific transcript path.
◆ transcript_names
vector<string> vg::TranscriptPath::transcript_names |
The documentation for this struct was generated from the following files: