vg
tools for working with variation graphs
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Static Public Member Functions | List of all members
vg::VGIndexes Struct Reference

#include <index_registry.hpp>

Static Public Member Functions

static IndexRegistry get_vg_index_registry ()
 A complete index registry for VG mapping utilities.
 
static vector< IndexNameget_default_map_indexes ()
 A list of the identifiers of the default indexes to run vg map.
 
static vector< IndexNameget_default_mpmap_indexes ()
 A list of the identifiers of the default indexes to run vg mpmap.
 
static vector< IndexNameget_default_rpvg_indexes ()
 A list of the identifiers of the default indexes to run rpvg.
 
static vector< IndexNameget_default_giraffe_indexes ()
 A list of the identifiers of the default indexes to run vg giraffe.
 

Detailed Description

A struct namespace for standard inputs

Member Function Documentation

◆ get_default_giraffe_indexes()

vector< IndexName > vg::VGIndexes::get_default_giraffe_indexes ( )
static

A list of the identifiers of the default indexes to run vg giraffe.

◆ get_default_map_indexes()

vector< IndexName > vg::VGIndexes::get_default_map_indexes ( )
static

A list of the identifiers of the default indexes to run vg map.

◆ get_default_mpmap_indexes()

vector< IndexName > vg::VGIndexes::get_default_mpmap_indexes ( )
static

A list of the identifiers of the default indexes to run vg mpmap.

◆ get_default_rpvg_indexes()

vector< IndexName > vg::VGIndexes::get_default_rpvg_indexes ( )
static

A list of the identifiers of the default indexes to run rpvg.

◆ get_vg_index_registry()

IndexRegistry vg::VGIndexes::get_vg_index_registry ( )
static

A complete index registry for VG mapping utilities.

Data files

Chunked inputs

True indexes


The documentation for this struct was generated from the following files: