deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: perl:any, libbz2-1.0, libc6 (>= 2.34), zlib1g (>= 1:1.2.6)
Description: |-
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
Homepage: http://research-pub.gene.com/gmap
Installed-Size: '268822'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: gmap
Priority: optional
Section: science
Version: 2024-11-20+ds-1
srcpkg_name: gmap
srcpkg_version: 2024-11-20+ds-1