18#ifndef __DUDLEY_ELEMENTFILE_H__
19#define __DUDLEY_ELEMENTFILE_H__
66 void copyTable(index_t offset, index_t nodeOffset, index_t idOffset,
70 void print(
const index_t* nodesId)
const;
74 const index_t* nodesId);
85 void relabelNodes(
const index_t* newNode, index_t offset);
87 void markNodes(std::vector<short>& mask, index_t offset)
const;
98 bool reducedOrder)
const;
Definition dudley/src/ElementFile.h:53
void print(const index_t *nodesId) const
prints information about this element file to stdout
Definition dudley/src/ElementFile.cpp:117
ElementFile_Jacobians * jacobians_reducedQ
Definition dudley/src/ElementFile.h:167
int numNodes
number of nodes per element
Definition dudley/src/ElementFile.h:130
void gather(const index_t *index, const ElementFile *in)
Definition dudley/src/ElementFile.cpp:134
index_t minColor
minimum color value
Definition dudley/src/ElementFile.h:141
index_t maxColor
maximum color value
Definition dudley/src/ElementFile.h:144
dim_t numElements
number of elements
Definition dudley/src/ElementFile.h:113
~ElementFile()
Definition dudley/src/ElementFile.cpp:47
std::pair< index_t, index_t > getNodeRange() const
Definition dudley/src/ElementFile.h:170
void copyTable(index_t offset, index_t nodeOffset, index_t idOffset, const ElementFile *in)
Definition dudley/src/ElementFile.cpp:94
int * Owner
Owner[i] contains the rank that owns element i.
Definition dudley/src/ElementFile.h:124
int numLocalDim
dimension of the element e.g. 2 for a line in 2D or 3D
Definition dudley/src/ElementFile.h:150
void distributeByRankOfDOF(const int *mpiRankOfDOF, const index_t *nodesId)
redistributes the elements including overlap by rank
Definition ElementFile_distributeByRankOfDOF.cpp:24
void freeTable()
deallocates the element table within an element file
Definition dudley/src/ElementFile.cpp:81
std::vector< int > tagsInUse
array of tags which are actually used
Definition dudley/src/ElementFile.h:127
void allocTable(dim_t NE)
allocates the element table within an element file to hold NE elements
Definition dudley/src/ElementFile.cpp:54
void optimizeOrdering()
reorders the elements so that they are stored close to the nodes
Definition dudley/src/ElementFile.cpp:164
ElementFile_Jacobians * borrowJacobians(const NodeFile *nodes, bool reducedOrder) const
Definition dudley/src/ElementFile_jacobians.cpp:41
ElementFile_Jacobians * jacobians
jacobians of the shape function used for solution approximation
Definition dudley/src/ElementFile.h:163
index_t * Color
Definition dudley/src/ElementFile.h:138
void swapTable(ElementFile *other)
Definition dudley/src/ElementFile.cpp:151
void relabelNodes(const index_t *newNode, index_t offset)
Definition dudley/src/ElementFile.cpp:238
void setTags(int newTag, const escript::Data &mask)
sets element tags to newTag where mask > 0
Definition dudley/src/ElementFile.cpp:193
const char * ename
name of element type
Definition dudley/src/ElementFile.h:156
int numShapes
number of shape functions
Definition dudley/src/ElementFile.h:159
index_t * Nodes
Nodes[INDEX(k, i, numNodes)] is the k-th node in the i-th element.
Definition dudley/src/ElementFile.h:133
void markNodes(std::vector< short > &mask, index_t offset) const
Definition dudley/src/ElementFile.cpp:228
index_t * Id
Definition dudley/src/ElementFile.h:118
void updateTagList()
Definition dudley/src/ElementFile.h:175
int numDim
number of spatial dimensions of the domain
Definition dudley/src/ElementFile.h:147
int * Tag
Tag[i] is the tag of element i.
Definition dudley/src/ElementFile.h:121
void createColoring(dim_t numNodes, const index_t *degreeOfFreedom)
Definition ElementFile_createColoring.cpp:25
escript::JMPI MPIInfo
Definition dudley/src/ElementFile.h:110
ElementTypeId etype
element type ID
Definition dudley/src/ElementFile.h:153
Definition dudley/src/NodeFile.h:40
Data represents a collection of datapoints.
Definition Data.h:64
void setValuesInUse(const int *values, dim_t numValues, std::vector< int > &valuesInUse, escript::JMPI mpiinfo)
Definition dudley/src/Util.cpp:224
IndexPair getMinMaxInt(int dim, dim_t N, const index_t *values)
Definition dudley/src/Util.cpp:159
A suite of factory methods for creating 2D and 3D dudley domains.
Definition dudley/src/Assemble.h:32
ElementTypeId
Definition ElementType.h:25
boost::shared_ptr< JMPI_ > JMPI
Definition EsysMPI.h:76
Definition dudley/src/ElementFile.h:29
ElementFile_Jacobians()
Definition dudley/src/ElementFile_jacobians.cpp:24
double * absD
used to compute volume
Definition dudley/src/ElementFile.h:44
double quadweight
used to compute volume
Definition dudley/src/ElementFile.h:46
int numShapes
number of shape functions
Definition dudley/src/ElementFile.h:40
dim_t numElements
number of elements
Definition dudley/src/ElementFile.h:42
int numQuad
number of quadrature nodes used to calculate jacobians
Definition dudley/src/ElementFile.h:38
~ElementFile_Jacobians()
Definition dudley/src/ElementFile_jacobians.cpp:35
double * DSDX
Definition dudley/src/ElementFile.h:49
int status
status of mesh when jacobians were updated last time
Definition dudley/src/ElementFile.h:34
int numDim
number of spatial dimensions
Definition dudley/src/ElementFile.h:36