deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: amd64
Depends: fastaq, python3-networkx, python3-packaging, python3-pysam, python3:any,
perl:any, kmc, mummer, smalt, samtools, python3-numpy, default-jre-headless
Description: |-
iterative virus sequence assembler
IVA is a de novo assembler designed to assemble
virus genomes that have no repeat sequences,
using Illumina read pairs sequenced from mixed
populations at extremely high depth.
.
IVA's main algorithm works by iteratively extending
contigs using aligned read pairs. Its input can be
just read pairs, or additionally you can provide an
existing set of contigs to be extended. Alternatively,
it can take reads together with a reference sequence.
Homepage: https://github.com/sanger-pathogens/iva
Installed-Size: '8770'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: iva
Priority: optional
Recommends: r-base-core, bioperl, trimmomatic
Section: science
Version: 1.0.11+ds-6
srcpkg_name: iva
srcpkg_version: 1.0.11+ds-6