Enum Class ReferenceContextType

java.lang.Object
java.lang.Enum<ReferenceContextType>
htsjdk.samtools.cram.ref.ReferenceContextType
All Implemented Interfaces:
Serializable, Comparable<ReferenceContextType>, Constable

public enum ReferenceContextType extends Enum<ReferenceContextType>
Is this ReferenceContext Single Reference, Multiple Reference, or Unmapped? Section 8.5 of the CRAM spec defines the following values for the Slice Header sequence ID field: -2: Multiple Reference Slice -1: Unmapped-Unplaced Slice Any positive integer (including zero): Single Reference Slice
  • Enum Constant Details

  • Method Details

    • values

      public static ReferenceContextType[] values()
      Returns an array containing the constants of this enum class, in the order they are declared.
      Returns:
      an array containing the constants of this enum class, in the order they are declared
    • valueOf

      public static ReferenceContextType valueOf(String name)
      Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)
      Parameters:
      name - the name of the enum constant to be returned.
      Returns:
      the enum constant with the specified name
      Throws:
      IllegalArgumentException - if this enum class has no constant with the specified name
      NullPointerException - if the argument is null