Package htsjdk.beta.plugin.reads
package htsjdk.beta.plugin.reads
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ClassDescriptionReadsBundle<T extends IOPath>A class for creating a
Bundle
for reads and reads-related resources.Base class for allHtsContentType.ALIGNED_READS
codecs.Base class for allHtsContentType.ALIGNED_READS
decoders.Reads decoder options (shared/common).Base interface forHtsContentType.ALIGNED_READS
encoders.General reads encoder options.Class with string constants for known formats supported by reads codecs.ReadsQuery<R extends HtsRecord>Query methods specific toReadsDecoder
s.