Class FailsVendorReadQualityFilter

java.lang.Object
htsjdk.samtools.filter.FailsVendorReadQualityFilter
All Implemented Interfaces:
SamRecordFilter

public class FailsVendorReadQualityFilter extends Object implements SamRecordFilter
Filter for filtering out reads that do not pass the quality filter $Id$
  • Constructor Details

    • FailsVendorReadQualityFilter

      public FailsVendorReadQualityFilter()
  • Method Details

    • filterOut

      public boolean filterOut(SAMRecord record)
      Determines whether a SAMRecord matches this filter
      Specified by:
      filterOut in interface SamRecordFilter
      Parameters:
      record - the SAMRecord to evaluate
      Returns:
      true if the SAMRecord matches the filter, otherwise false
    • filterOut

      public boolean filterOut(SAMRecord first, SAMRecord second)
      Determines whether a pair of SAMRecord matches this filter
      Specified by:
      filterOut in interface SamRecordFilter
      Parameters:
      first - the first SAMRecord to evaluate
      second - the second SAMRecord to evaluate
      Returns:
      true if the SAMRecords matches the filter, otherwise false