Hierarchy For Package htsjdk.tribble
Class Hierarchy
- java.lang.Object
- htsjdk.tribble.AbstractFeatureCodec<FEATURE_TYPE,
SOURCE> (implements htsjdk.tribble.FeatureCodec<FEATURE_TYPE, SOURCE>) - htsjdk.tribble.AsciiFeatureCodec<T>
- htsjdk.tribble.AbstractFeatureReader<T,
SOURCE> (implements htsjdk.tribble.FeatureReader<T>) - htsjdk.tribble.TabixFeatureReader<T,
SOURCE> - htsjdk.tribble.TribbleIndexedFeatureReader<T,
SOURCE>
- htsjdk.tribble.TabixFeatureReader<T,
- htsjdk.tribble.AbstractFeatureReader.ComponentMethods
- htsjdk.tribble.BinaryFeatureCodec<T> (implements htsjdk.tribble.FeatureCodec<FEATURE_TYPE,
SOURCE>) - htsjdk.tribble.FeatureCodecHeader
- htsjdk.tribble.MutableFeature (implements htsjdk.tribble.Feature)
- htsjdk.tribble.SimpleFeature (implements htsjdk.tribble.Feature)
- java.lang.Throwable (implements java.io.Serializable)
- java.lang.Exception
- java.lang.RuntimeException
- htsjdk.tribble.TribbleException
- htsjdk.tribble.TribbleException.CorruptedIndexFile
- htsjdk.tribble.TribbleException.FeatureFileDoesntExist
- htsjdk.tribble.TribbleException.InternalCodecException
- htsjdk.tribble.TribbleException.InvalidDecodeLine
- htsjdk.tribble.TribbleException.InvalidHeader
- htsjdk.tribble.TribbleException.MalformedFeatureFile
- htsjdk.tribble.TribbleException.TabixReaderFailure
- htsjdk.tribble.TribbleException.UnableToCreateCorrectIndexType
- htsjdk.tribble.TribbleException.UnableToReadIndexFile
- htsjdk.tribble.TribbleException
- java.lang.RuntimeException
- java.lang.Exception
- htsjdk.tribble.Tribble
- htsjdk.tribble.AbstractFeatureCodec<FEATURE_TYPE,
Interface Hierarchy
- java.lang.AutoCloseable
- java.io.Closeable
- htsjdk.samtools.util.CloseableIterator<T> (also extends java.util.Iterator<E>)
- htsjdk.tribble.CloseableTribbleIterator<T> (also extends java.lang.Iterable<T>)
- htsjdk.tribble.FeatureReader<T>
- htsjdk.samtools.util.CloseableIterator<T> (also extends java.util.Iterator<E>)
- java.io.Closeable
- htsjdk.tribble.FeatureCodec<FEATURE_TYPE,
SOURCE> - java.lang.Iterable<T>
- htsjdk.tribble.CloseableTribbleIterator<T> (also extends htsjdk.samtools.util.CloseableIterator<T>)
- java.util.Iterator<E>
- htsjdk.samtools.util.CloseableIterator<T> (also extends java.io.Closeable)
- htsjdk.tribble.CloseableTribbleIterator<T> (also extends java.lang.Iterable<T>)
- htsjdk.samtools.util.CloseableIterator<T> (also extends java.io.Closeable)
- htsjdk.samtools.util.Locatable
- htsjdk.tribble.Feature
- htsjdk.tribble.NamedFeature
- htsjdk.tribble.Feature
- htsjdk.tribble.NameAwareCodec