Package htsjdk.beta.plugin
Interface Upgradeable
- All Known Subinterfaces:
HaploidReferenceCodec
,HtsCodec<D,
,E> ReadsCodec
,VariantsCodec
- All Known Implementing Classes:
BAMCodec
,BAMCodecV1_0
,CRAMCodec
,CRAMCodecV2_1
,CRAMCodecV3_0
,FASTACodecV1_0
,HtsgetBAMCodec
,HtsgetBAMCodecV1_2
,SAMCodec
,SAMCodecV1_0
,VCFCodec
,VCFCodecV3_2
,VCFCodecV3_3
,VCFCodecV4_0
,VCFCodecV4_1
,VCFCodecV4_2
,VCFCodecV4_3
public interface Upgradeable
Placeholder interface for methods for upgrading one version of a format to a newer version.
-
Method Summary
Modifier and TypeMethodDescriptionboolean
runVersionUpgrade
(HtsVersion sourceCodecVersion, HtsVersion targetCodecVersion)
-
Method Details
-
runVersionUpgrade
-