Class StreamBasedTabixIndexCreator

java.lang.Object
htsjdk.tribble.index.tabix.AllRefsTabixIndexCreator
htsjdk.tribble.index.tabix.StreamBasedTabixIndexCreator
All Implemented Interfaces:
IndexCreator

public class StreamBasedTabixIndexCreator extends AllRefsTabixIndexCreator
A TabixIndexCreator that can write to an output stream.
  • Constructor Details

  • Method Details

    • finalizeIndex

      public Index finalizeIndex(long finalFilePosition)
      Description copied from interface: IndexCreator
      Create the index, given the stream of features passed in to this point
      Specified by:
      finalizeIndex in interface IndexCreator
      Overrides:
      finalizeIndex in class AllRefsTabixIndexCreator
      Parameters:
      finalFilePosition - the final file position, for indexes that have to close out with the final position
      Returns:
      an index object