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Architecture: amd64
Depends: python3:any, r-base-core, r-bioc-dada2 (>= 1.24.0+dfsg-2~), r-cran-optparse,
qiime (>= 2022.11.1), q2-types (>= 2022.11.1), python3-biom-format, python3-skbio
Description: |-
QIIME 2 plugin to work with adapters in sequence data
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
researchers to start an analysis with raw DNA sequence data and finish with
publication-quality figures and statistical results.
Key features:
* Integrated and automatic tracking of data provenance
* Semantic type system
* Plugin system for extending microbiome analysis functionality
* Support for multiple types of user interfaces (e.g. API, command line,
graphical)
.
QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
retaining the features that makes QIIME 1 a powerful and widely-used analysis
pipeline.
.
QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
New functionality will regularly become available through QIIME 2 plugins. You
can view a list of plugins that are currently available on the QIIME 2 plugin
availability page. The future plugins page lists plugins that are being
developed.
.
This package wraps the dada2 R package in BioConductor for modeling and
correcting Illumina-sequenced amplicon errors. This was shown to improve the
sensitivity of diversity analyses.
Homepage: https://qiime2.org/
Installed-Size: '2282'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: q2-dada2
Priority: optional
Section: science
Version: 2022.11.2-2
srcpkg_name: q2-dada2
srcpkg_version: 2022.11.2-2