deb_control_files:
- conffiles
- config
- control
- md5sums
- postinst
- postrm
- prerm
- templates
deb_fields:
Architecture: all
Conflicts: qc-pipeline
Depends: python3:any, debconf (>= 0.5) | debconf-2.0, python3-jinja2, python3-matplotlib,
python3-biopython, libjs-angularjs, libjs-bootstrap, libjs-d3, libjs-jquery, r-base-core,
r-bioc-savr, r-cran-ggplot2, r-cran-quantreg, snakemake
Description: |-
quality control of genomic sequences
QCPipeline is a tool for quality control. The workflow is as follows:
.
1. Quality control with FastQC
2. Trim Reads with Trimmomatic
3. Quality control of trimmed reads with FastQC
4. Map reads against reference using bowtie2
5. Classify reads with Kraken
Homepage: https://gitlab.com/RKIBioinformaticsPipelines/QCumber
Installed-Size: '236'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: qcumber
Priority: optional
Provides: qc-pipeline
Replaces: qc-pipeline
Section: science
Version: 2.3.0-2
srcpkg_name: qcumber
srcpkg_version: 2.3.0-2