deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-limma, r-bioc-dexseq, r-bioc-saturn
(>= 1.7.0), r-bioc-sva, r-cran-ggplot2 (>= 3.3.5), r-bioc-pfamanalyzer, r-bioc-bsgenome,
r-cran-plyr, r-cran-reshape2, r-cran-gridextra, r-bioc-biostrings (>= 2.50.0),
r-bioc-iranges, r-bioc-genomicranges, r-cran-rcolorbrewer, r-bioc-rtracklayer,
r-cran-venndiagram, r-cran-dbi, r-bioc-genomeinfodb, r-bioc-tximport (>= 1.7.1),
r-bioc-tximeta (>= 1.7.12), r-bioc-edger, r-cran-futile.logger, r-cran-stringr,
r-cran-dplyr, r-cran-magrittr, r-cran-readr, r-cran-tibble, r-bioc-xvector, r-bioc-biocgenerics,
r-cran-rcurl, r-bioc-biobase, r-bioc-summarizedexperiment, r-cran-tidyr, r-bioc-s4vectors,
r-bioc-biocparallel, r-bioc-pwalign
Description: |-
Identify, Annotate and Visualize Alternative Splicing and
Isoform Switches with Functional Consequences from both short- and
long-read RNA-seq data. Analysis of alternative splicing and
isoform switches with predicted functional consequences (e.g.
gain/loss of protein domains etc.) from quantification of all
types of RNASeq by tools such as Kallisto, Salmon, StringTie,
Cufflinks/Cuffdiff etc.
Homepage: https://bioconductor.org/packages/IsoformSwitchAnalyzeR/
Installed-Size: '4770'
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Package: r-bioc-isoformswitchanalyzer
Priority: optional
Section: gnu-r
Suggests: r-cran-knitr, r-cran-rmarkdown
Version: 2.6.0+ds-2
srcpkg_name: r-bioc-isoformswitchanalyzer
srcpkg_version: 2.6.0+ds-2