deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Description: |-
converts proteins to genomic DNA alignment
PAL2NAL is a program that converts a multiple sequence alignment
of proteins and the corresponding DNA (or mRNA) sequences into
a codon-based DNA alignment. The program automatically assigns
the corresponding codon sequence even if the input DNA sequence
has mismatches with the input protein sequence, or contains UTRs,
polyA tails. It can also deal with frame shifts in the input
alignment, which is suitable for the analysis of pseudogenes.
The resulting codon-based DNA alignment can further be subjected
to the calculation of synonymous (Ks) and non-synonymous (Ka)
substitution rates.
Homepage: http://www.bork.embl.de/pal2nal
Installed-Size: '91'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: pal2nal
Priority: optional
Recommends: paml
Section: science
Version: 14.1-3
srcpkg_name: pal2nal
srcpkg_version: 14.1-3