deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: r-api-4.0, r-cran-dplyr, r-cran-magrittr, r-cran-mass, r-cran-matrix (>=
1.5-0), r-cran-future.apply, r-cran-future, r-cran-ggplot2, r-cran-reshape2, r-cran-rlang,
r-cran-gridextra, r-cran-matrixstats, r-cran-rcpparmadillo, r-cran-rcpp (>= 0.11.0),
libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.0), liblapack3 | liblapack.so.3,
libstdc++6 (>= 13.1)
Description: |-
Variance Stabilizing Transformations for Single Cell UMI Data
A normalization method for single-cell UMI count data using a
variance stabilizing transformation. The transformation is based on a
negative binomial regression model with regularized parameters. As part of the
same regression framework, this package also provides functions for
batch correction, and data correction. See Hafemeister and Satija 2019
<doi:10.1101/576827> for more details.
Homepage: https://cran.r-project.org/package=sctransform
Installed-Size: '735'
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Package: r-cran-sctransform
Priority: optional
Recommends: r-cran-irlba, r-cran-testthat, r-cran-knitr
Section: gnu-r
Version: 0.4.1-1
srcpkg_name: r-cran-sctransform
srcpkg_version: 0.4.1-1