Class NeighborJoiningTreeBuilder

java.lang.Object
jebl.evolution.trees.ClusteringTreeBuilder<Tree>
jebl.evolution.trees.NeighborJoiningTreeBuilder
All Implemented Interfaces:
TreeBuilder<Tree>

public class NeighborJoiningTreeBuilder extends ClusteringTreeBuilder<Tree>
Constructs an unrooted tree by neighbor-joining using pairwise distances. Adapted from BEAST code.
Version:
$Id: NeighborJoiningTreeBuilder.java 855 2007-12-11 04:04:18Z twobeers $
Author:
Andrew Rambaut, Alexei Drummond, Joseph Heled
  • Constructor Details

    • NeighborJoiningTreeBuilder

      public NeighborJoiningTreeBuilder(DistanceMatrix distanceMatrix)
      construct NJ tree
      Parameters:
      distanceMatrix - distance matrix