Uses of Package
jebl.evolution.trees
Packages that use jebl.evolution.trees
Package
Description
Provides classes and interfaces for pairwise alignment of two sequences.
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Classes in jebl.evolution.trees used by jebl.evolution.alignClassDescriptionA tree with a root (node with maximum height).A rooted or unrooted tree.Supported pairwise distance methodsSupported methods for tree building
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Classes in jebl.evolution.trees used by jebl.evolution.coalescent
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Classes in jebl.evolution.trees used by jebl.evolution.io
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Classes in jebl.evolution.trees used by jebl.evolution.parsimony
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Classes in jebl.evolution.trees used by jebl.evolution.treemetrics
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Classes in jebl.evolution.trees used by jebl.evolution.treesClassDescriptionStores a set of unique clades for a treeAn abstract base class for clustering algorithms from pairwise distancesA
TreeBuilder
that builds a consensus tree for a set of trees on identical leaf sets.Supported consensus methods.A tree with a root (node with maximum height).data structure for a set of splitsA rooted or unrooted tree.Work in progressSupported consensus methods.Supported pairwise distance methodsSupported methods for tree buildingRepresents a change to a tree.Represents a change to the selected nodes in a tree. -
Classes in jebl.evolution.trees used by jebl.evolution.treesimulation