deb_control_files:
- control
- md5sums
deb_fields:
Architecture: all
Description: |-
Chromatin state discovery and characterization (example)
ChromHMM is software for learning and characterizing chromatin states.
ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of
various histone modifications to discover de novo the major re-occuring
combinatorial and spatial patterns of marks. ChromHMM is based on a
multivariate Hidden Markov Model that explicitly models the presence or
absence of each chromatin mark. The resulting model can then be used to
systematically annotate a genome in one or more cell types. By automatically
computing state enrichments for large-scale functional and annotation datasets
ChromHMM facilitates the biological characterization of each state. ChromHMM
also produces files with genome-wide maps of chromatin state annotations that
can be directly visualized in a genome browser.
.
This package provides example to work with ChromHMM.
Enhances: chromhmm
Homepage: http://compbio.mit.edu/ChromHMM/
Installed-Size: '44191'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Multi-Arch: foreign
Package: chromhmm-example
Priority: optional
Section: doc
Source: chromhmm
Version: 1.24+dfsg-1
srcpkg_name: chromhmm
srcpkg_version: 1.24+dfsg-1