BLOCKS Bibliography
Blocks papers in Postcript and PDF format.
The current references for the Blocks Database are:
-
J.G. Henikoff, E.A. Greene, S. Pietrokovski & S. Henikoff, "Increased
coverage of protein families with the blocks database servers",
Nucl. Acids Res. 28:228-230 (2000).
MEDLINE
NAR Article
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S. Henikoff, J.G. Henikoff & S. Pietrokovski, "Blocks+: A non-redundant
database of protein alignment blocks dervied from multiple compilations",
Bioinformatics 15(6):471-479 (1999).
MEDLINE
PDF
If you use the Block Searcher as a tool in your
published research, we ask that you cite:
-
S. Henikoff & J. G. Henikoff,
"Protein family classification based on searching a database
of blocks", Genomics 19:97-107 (1994).
MEDLINE
Postscript
PDF
If you use the Block Maker as a tool in your
published research, we ask that you cite:
-
S. Henikoff, J. G. Henikoff, W. J. Alford & S. Pietrokovski,
"Automated construction and graphical presentation of protein blocks
from unaligned sequences", Gene-COMBIS, Gene 163 (1995) GC 17-26.
MEDLINE
Gene-COMBIS Article
Postscript
PDF
If you use LAMA as a tool in your published research, we ask
that you cite:
-
S. Pietrokovski, "Searching Databases of Conserved Seqeuence Regions by
Aligning Protein Multiple-Alignments", Nucl. Acids Res. 24:3836-3845 (1996).
MEDLINE
NAR Article
Postscript
PDF
If you use CODEHOP as a tool in your published research, we ask
that you cite:
-
T.M. Rose, E.R. Schultz, J.G. Henikoff, C.M. McCallum & S. Henikoff,
"Consensus-degenerate hybrid oligonucleotide primers for
amplification of distantly-related sequences", Nucl. Acids Res. 26:1628-1635
(1998).
MEDLINE
NAR Article
Postscript
PDF
If you use SIFT as a tool in your published research, we ask
that you cite:
-
P.C. Ng and S. Henikoff, "SIFT: Predicting deleterious substitutions",
Genome Res. 11:863-874 (2001).
MEDLINE
PDF
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