Snakemake
7.32.4
Getting started
Installation
Snakemake Tutorial
Short tutorial
Snakemake Executor Tutorials
Best practices
Executing workflows
Command line interface
Cluster Execution
Cloud execution
Job Grouping
Between workflow caching
Interoperability
Monitoring
Defining workflows
Writing Workflows
Snakefiles and Rules
Configuration
Modularization
Remote files
Utils
Distribution and Reproducibility
Reports
Automatically generating unit tests
Integrating foreign workflow management systems
Project Info
Citing and Citations
More Resources
Frequently Asked Questions
Contributing
Credits
License
Snakemake
Index
Index