Class VcfOutputFormatter

java.lang.Object
org.snpeff.outputFormatter.OutputFormatter
org.snpeff.outputFormatter.VcfOutputFormatter

public class VcfOutputFormatter extends OutputFormatter
Formats output as VCF
Author:
pcingola
  • Field Details

    • debug

      public static boolean debug
    • VCF_INFO_OICR_NAME

      public static final String VCF_INFO_OICR_NAME
      See Also:
  • Constructor Details

    • VcfOutputFormatter

      public VcfOutputFormatter()
    • VcfOutputFormatter

      public VcfOutputFormatter(List<VcfEntry> vcfEntries)
      Add all vcf entries to a list (used only for debugging and test-cases)
  • Method Details