Package org.snpeff.fastq
Class FastqSplit
java.lang.Object
org.snpeff.fastq.FastqSplit
- All Implemented Interfaces:
CommandLine
Split a fastq into N files
- Author:
- pablocingolani
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Field Summary
Fields -
Constructor Summary
Constructors -
Method Summary
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Field Details
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K
public static final long K- See Also:
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M
public static final long M- See Also:
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G
public static final long G- See Also:
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T
public static final long T- See Also:
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P
public static final long P- See Also:
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BUFFER_SIZE
public static final int BUFFER_SIZE- See Also:
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Constructor Details
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FastqSplit
public FastqSplit()
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Method Details
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main
Main- Parameters:
args
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getArgs
- Specified by:
getArgs
in interfaceCommandLine
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getSplitFileNames
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parseArgs
Parse command line arguments- Specified by:
parseArgs
in interfaceCommandLine
- Parameters:
args
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run
public boolean run()Run command- Specified by:
run
in interfaceCommandLine
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setVerbose
public void setVerbose(boolean verbose) -
usage
Usage message- Specified by:
usage
in interfaceCommandLine
- Parameters:
message
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