Class DnaSubsequenceComparator<T extends DnaSequence>

java.lang.Object
org.snpeff.binseq.comparator.SubsequenceComparator<T>
org.snpeff.binseq.comparator.DnaSubsequenceComparator<T>

public class DnaSubsequenceComparator<T extends DnaSequence> extends SubsequenceComparator<T>
Compares two subsequences of DNA (DnaSequence)
Author:
pcingola
  • Constructor Details

    • DnaSubsequenceComparator

      public DnaSubsequenceComparator(boolean differentLengthsAreEqual)
    • DnaSubsequenceComparator

      public DnaSubsequenceComparator(boolean differentLengthsAreEqual, int maxDifferentBases)
  • Method Details