Uses of Class
org.snpeff.util.Tuple
Packages that use Tuple
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Uses of Tuple in org.snpeff.spliceSites
Methods in org.snpeff.spliceSites that return TupleModifier and TypeMethodDescriptionSpliceTypes.addBestU12Score
(Transcript tr, String chrSeq, String donorAcceptor, int intronStart, int intronEnd) Calculate the best U12 score.SpliceTypes.bestU12Score
(String seq) Find the best score for PWM matrix in U12 branch points -
Uses of Tuple in org.snpeff.vcf
Methods in org.snpeff.vcf that return types with arguments of type Tuple