Package org.jmol.dssx

Class DSSP

java.lang.Object
org.jmol.dssx.DSSP

public class DSSP extends Object
  • Constructor Details

    • DSSP

      public DSSP()
  • Method Details

    • calculateDssp

      public String calculateDssp(Object[] objBioPolymers, int bioPolymerCount, Object objVHBonds, boolean doReport, boolean dsspIgnoreHydrogens, boolean setStructure, int version)
      Parameters:
      objBioPolymers -
      bioPolymerCount -
      objVHBonds -
      doReport -
      dsspIgnoreHydrogens -
      setStructure -
      version - can be 2.0 to reverse order of helix calculation and emphasize pi-helices
      Returns:
      helix-5, helix-4, helix-3, and SUMMARY lines