Uses of Class
org.jmol.adapter.smarter.XtalSymmetry.FileSymmetry
Packages that use XtalSymmetry.FileSymmetry
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Uses of XtalSymmetry.FileSymmetry in org.jmol.adapter.readers.cif
Methods in org.jmol.adapter.readers.cif that return XtalSymmetry.FileSymmetryModifier and TypeMethodDescriptionMSRdr.getAtomSymmetry
(Atom a, XtalSymmetry.FileSymmetry defaultSymmetry) When applying symmetry, this method allows us to use a set of symmetry operators unique to this particular atom -- or in this case, to its subsystem.MSRdr.getSymmetryFromCode
(String code) Methods in org.jmol.adapter.readers.cif with parameters of type XtalSymmetry.FileSymmetryModifier and TypeMethodDescriptionMSRdr.getAtomSymmetry
(Atom a, XtalSymmetry.FileSymmetry defaultSymmetry) When applying symmetry, this method allows us to use a set of symmetry operators unique to this particular atom -- or in this case, to its subsystem.void
MSRdr.setModulation
(boolean isPost, XtalSymmetry.FileSymmetry symmetry) Both the Jana reader and the CIF reader will call this to set the modulation for a given model. -
Uses of XtalSymmetry.FileSymmetry in org.jmol.adapter.smarter
Fields in org.jmol.adapter.smarter declared as XtalSymmetry.FileSymmetryMethods in org.jmol.adapter.smarter that return XtalSymmetry.FileSymmetryModifier and TypeMethodDescriptionAtomSetCollectionReader.applySymTrajASCR()
MSInterface.getAtomSymmetry
(Atom a, XtalSymmetry.FileSymmetry symmetry) XtalSymmetry.getBaseSymmetry()
Get the symmetry that was in place prior to any supercell business.AtomSetCollection.getSymmetry()
AtomSetCollectionReader.getSymmetry()
XtalSymmetry.getSymmetry()
MSInterface.getSymmetryFromCode
(String spaceGroupOperationCode) AtomSetCollection.newFileSymmetry()
XtalSymmetry.newFileSymmetry()
AtomSetCollection.setSymmetry
(XtalSymmetry.FileSymmetry symmetry) Methods in org.jmol.adapter.smarter with parameters of type XtalSymmetry.FileSymmetryModifier and TypeMethodDescriptionXtalSymmetry.addRotatedTensor
(Atom a, Tensor t, int iSym, boolean reset, XtalSymmetry.FileSymmetry symmetry) MSInterface.getAtomSymmetry
(Atom a, XtalSymmetry.FileSymmetry symmetry) void
MSInterface.setModulation
(boolean isPost, XtalSymmetry.FileSymmetry symmetry) AtomSetCollection.setSymmetry
(XtalSymmetry.FileSymmetry symmetry)