Uses of Class
javajs.util.SB
Packages that use SB
Package
Description
-
Uses of SB in javajs.api
Methods in javajs.api that return SBModifier and TypeMethodDescriptionGenericBinaryDocument.getAllDataFiles
(String binaryFileList, String firstFile) -
Uses of SB in javajs.util
Methods in javajs.util that return SBModifier and TypeMethodDescriptionSB.appendB
(boolean b) SB.appendC
(char c) SB.appendD
(double d) SB.appendF
(float f) note that JavaScript could drop off the ".0" in "1.0"SB.appendI
(int i) CompoundDocument.getAllData()
BinaryDocument.getAllDataFiles
(String binaryFileList, String firstFile) CompoundDocument.getAllDataFiles
(String binaryFileList, String firstFile) static SB
Base64.getBase64
(byte[] bytes) CompoundDocument.getFileAsString
(String entryName) static SB
SB.newN
(int n) static SB
Methods in javajs.util with parameters of type SBModifier and TypeMethodDescriptionvoid
ZipData.addTo
(GenericZipTools jzt, SB data) static void
XmlUtil.appendAttrib
(SB sb, Object name, Object value) static void
XmlUtil.appendCdata
(SB sb, String name, Object[] attributes, String data) " will convert ]]> to ]] > static void
standarddata " standard" static void
XmlUtil.appendTagAll
(SB sb, String name, Object[] attributes, Object data, boolean isCdata, boolean doClose) static void
XmlUtil.appendTagObj
(SB sb, String name, Object[] attributes, Object data) standarddata "static void
static byte[]
Rdr.getBytesFromSB
(SB sb) Allow for base64-encoding check.static boolean
static void
PT.leftJustify
(SB s, String s1, String s2) static void
XmlUtil.openDocument
(SB data) static void
static void
XmlUtil.openTagAttr
(SB sb, String name, Object[] attributes) static void
PT.rightJustify
(SB s, String s1, String s2) -
Uses of SB in jspecview.source
Fields in jspecview.source declared as SBMethods in jspecview.source with parameters of type SBModifier and TypeMethodDescriptionJDXDecompressor.decompressData
(SB errorLog) Determines the type of compression, decompresses the data and stores coordinates in an array to be returned -
Uses of SB in org.jmol.adapter.readers.spartan
Methods in org.jmol.adapter.readers.spartan that return SBModifier and TypeMethodDescriptionSpartanUtil.getData
(InputStream is, String[] zipDirectory) called by SmarterJmolAdapter via JmolUtil to open a Spartan directory and get all the needed data as a string. -
Uses of SB in org.jmol.adapter.readers.xml
Fields in org.jmol.adapter.readers.xml declared as SB -
Uses of SB in org.jmol.adapter.writers
Subclasses of SB in org.jmol.adapter.writersMethods in org.jmol.adapter.writers with parameters of type SBModifier and TypeMethodDescriptionprotected static void
CMLWriter.addAttribute
(SB sb, String key, String val) protected static void
CMLWriter.addAttributes
(SB sb, String[] attributes) boolean
MOLWriter.addMolFile
(String title, int iModel, SB mol, BS bsAtoms, BS bsBonds, boolean asV3000, boolean asJSON, boolean noAromatic, Quat q, boolean is2d) protected static void
CMLWriter.appendEmptyTag
(SB sb, String name, String[] attributes) protected static void
static void
CMLWriter.openDocument
(SB sb) protected static void
protected static void
CMLWriter.startOpenTag
(SB sb, String name) protected static void
CMLWriter.terminateEmptyTag
(SB sb) protected static void
CMLWriter.terminateTag
(SB sb) -
Uses of SB in org.jmol.api
Methods in org.jmol.api with parameters of type SBModifier and TypeMethodDescriptionvoid
JmolScriptEvaluator.evaluateCompiledScript
(Object[] params, boolean isSyntaxCheck, boolean isSyntaxAndFileCheck, boolean historyDisabled, boolean listCommands, SB outputBuffer, boolean allowThreads) boolean
JmolDataManager.getDataState
(JmolStateCreator stateCreator, SB commands) boolean
boolean
void
JmolScriptEvaluator.runScriptBuffer
(String string, SB outputBuffer, boolean isFuncReturn) SymmetryInterface.staticTransformSpaceGroup
(BS bs, String cleg, Object paramsOrUC, SB sb) -
Uses of SB in org.jmol.awtjs.swing
Methods in org.jmol.awtjs.swing with parameters of type SB -
Uses of SB in org.jmol.jvxl.calc
Fields in org.jmol.jvxl.calc declared as SB -
Uses of SB in org.jmol.jvxl.data
Fields in org.jmol.jvxl.data declared as SBMethods in org.jmol.jvxl.data with parameters of type SBModifier and TypeMethodDescriptionstatic void
JvxlCoder.appendContourTriangleIntersection
(int type, float f1, float f2, SB fData) appends an integer (3, 5, or 6) representing two sides of a triangle ABC -- AB/BC(3), AB/CA(5), or BC/CA(6) -- along with two fractions along the edges for the intersection point base-90-encoded.static void
JvxlCoder.jvxlAppendEncodedNumber
(SB sb, int n, int base, int range) static void
JvxlCoder.jvxlCreateHeader
(VolumeData v, SB sb) Creates a two-line header for the XJVXL file.static void
JvxlCoder.jvxlCreateHeaderWithoutTitleOrAtoms
(VolumeData v, SB bs) static int
JvxlCoder.jvxlEncodeBitSet0
(BS bs, int nPoints, SB sb) static int
JvxlCoder.jvxlEncodeBitSetBuffer
(BS bs, int nPoints, SB sb) -
Uses of SB in org.jmol.jvxl.readers
Fields in org.jmol.jvxl.readers declared as SBModifier and TypeFieldDescriptionprotected SB
SurfaceReader.fractionData
protected SB
SurfaceReader.jvxlFileHeaderBuffer
Parameters.sbOut
-
Uses of SB in org.jmol.modelkit
Methods in org.jmol.modelkit with parameters of type SBModifier and TypeMethodDescriptionvoid
ModelKit.cmdAssignSpaceGroup
(String transform, SB sb, String cmd, boolean isPacked, boolean doDraw) MODELKIT SPACEGROUP -
Uses of SB in org.jmol.modelset
Fields in org.jmol.modelset declared as SBMethods in org.jmol.modelset with parameters of type SBModifier and TypeMethodDescriptionvoid
Text.appendFontCmd
(SB s) int
ModelSet.autoBondBs4
(BS bsA, BS bsB, BS bsExclude, BS bsBonds, short mad, boolean preJmol11_9_24, SB state) int[]
ModelSet.makeConnections2
(float minD, float maxD, int order, int connectOperation, BS bsA, BS bsB, BS bsBonds, boolean isBonds, boolean addGroup, float energy, SB state) Constructors in org.jmol.modelset with parameters of type SB -
Uses of SB in org.jmol.modelsetbio
Methods in org.jmol.modelsetbio with parameters of type SBModifier and TypeMethodDescriptionvoid
BioModel.getDefaultLargePDBRendering
(SB sb, int maxAtoms) void
BioModel.getPdbData
(String type, char ctype, boolean isDraw, BS bsSelected, OC out, LabelToken[] tokens, SB pdbCONECT, BS bsWritten) -
Uses of SB in org.jmol.quantum
Methods in org.jmol.quantum with parameters of type SB -
Uses of SB in org.jmol.script
Fields in org.jmol.script declared as SBMethods in org.jmol.script with parameters of type SBModifier and TypeMethodDescriptionvoid
ScriptEval.evaluateCompiledScript
(Object[] params, boolean isCmdLine_c_or_C_Option, boolean isCmdLine_C_Option, boolean historyDisabled, boolean listCommands, SB outputBuffer, boolean allowThreads) void
ScriptEval.runBufferedSafely
(String script, SB outputBuffer) void
ScriptEval.runScriptBuffer
(String script, SB outputBuffer, boolean isFuncReturn) runs a script immediately and sends selected output to a provided SB -
Uses of SB in org.jmol.scriptext
Methods in org.jmol.scriptext with parameters of type SBModifier and TypeMethodDescriptionint
CmdExt.getLoadSymmetryParams
(int i, SB sOptions, Map<String, Object> htParams) -
Uses of SB in org.jmol.shape
Methods in org.jmol.shape with parameters of type SB -
Uses of SB in org.jmol.shapespecial
Methods in org.jmol.shapespecial with parameters of type SB -
Uses of SB in org.jmol.shapesurface
Methods in org.jmol.shapesurface with parameters of type SBModifier and TypeMethodDescriptionstatic void
IsosurfaceMesh.addContourPoints
(Lst<Object> v, BS bsContour, int i, SB fData, T3[] vertices, float[] vertexValues, int iA, int iB, int iC, float value) static void
IsosurfaceMesh.setContourVector
(Lst<Object> v, int nPolygons, BS bsContour, float value, short colix, int color, SB fData) -
Uses of SB in org.jmol.symmetry
Methods in org.jmol.symmetry that return SBMethods in org.jmol.symmetry with parameters of type SB -
Uses of SB in org.jmol.util
Fields in org.jmol.util declared as SBMethods in org.jmol.util with parameters of type SB -
Uses of SB in org.jmol.viewer
Methods in org.jmol.viewer with parameters of type SBModifier and TypeMethodDescriptionvoid
ChimeMessenger.getAllChimeInfo
(SB sb) void
JmolChimeMessenger.getAllChimeInfo
(SB sb) boolean
DataManager.getDataState
(JmolStateCreator sc, SB sb) void
StateCreator.getInlineData
(SB loadScript, String strModel, boolean isAppend, Integer appendToModelIndex, String loadFilter) Viewer.loadModelFromFile
(String fullPathName, String fileName, String[] fileNames, Object reader, boolean isAppend, Map<String, Object> htParams, SB loadScript, SB sOptions, int tokType, String filecat) Used by the ScriptEvaluator LOAD command to open one or more files.void
#xxxx command outputvoid