Package org.jmol.shapesurface
Class MolecularOrbital
java.lang.Object
org.jmol.shape.Shape
org.jmol.shape.MeshCollection
org.jmol.shapesurface.Isosurface
org.jmol.shapesurface.MolecularOrbital
- All Implemented Interfaces:
MeshDataServer
,VertexDataServer
- Direct Known Subclasses:
NBO
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Field Summary
Fields inherited from class org.jmol.shapesurface.Isosurface
iHaveBitSets, isomeshes, keyXy, sg, thisMesh
Fields inherited from class org.jmol.shape.MeshCollection
bsDisplay, colix, color, connections, currentMesh, displayWithinDistance2, displayWithinPoints, explicitID, htObjects, isDisplayWithinNot, isFixed, jvxlData, linkedMesh, meshCount, meshes, modelIndex, nUnnamed, pickedMesh, pickedModel, pickedPt, pickedVertex, PREVIOUS_MESH_ID, previousMeshID, title
Fields inherited from class org.jmol.shape.Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionprotected void
clearSg()
getMoInfo
(int modelIndex) getProperty
(String propertyName, int index) void
void
merge
(MeshCollection shape) called by ParallelProcessor at completionvoid
setProperty
(String propertyName, Object value, BS bs) Methods inherited from class org.jmol.shapesurface.Isosurface
addMeshInfo, addRequiredFile, addTriangleCheck, addVertexCopy, allocMesh, calculateGeodesicSurface, checkObjectClicked, checkObjectHovered, discardTempData, fillMeshData, getCapSlabInfo, getCmd, getPlane, getPolygonColorData, getPropertyData, getPropI, getShapeDetail, getSurfacePointIndexAndFraction, getValue, getValues, getVertices, invalidateTriangles, newSg, notifySurfaceGenerationCompleted, notifySurfaceMappingCompleted, setOutputChannel, setPropI, setRequiredFile, setScriptInfo, slabPolygons
Methods inherited from class org.jmol.shape.MeshCollection
checkExplicit, clean, deleteMeshI, deleteMeshKey, getIndexFromName, getMesh, getMeshList, getPickedPoint, getPropDataMC, getPropMC, resetObjects, setMeshColor, setModelVisibilityFlags, setPropMC, setStatusPicked, setTitle, setTokenProperty
Methods inherited from class org.jmol.shape.Shape
appendCmd, checkBoundsMinMax, checkObjectDragged, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getPropShape, getSize, getSizeG, getTranslucentLabel, initializeShape, initModelSet, replaceGroup, setAtomClickability, setModelSet, setProperties, setPropS, setShapeSizeRD, setSize, setSizeRD, wasClicked
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Constructor Details
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MolecularOrbital
public MolecularOrbital()
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Method Details
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initShape
public void initShape()- Overrides:
initShape
in classIsosurface
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setProperty
- Overrides:
setProperty
in classIsosurface
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getProperty
- Overrides:
getProperty
in classIsosurface
- Parameters:
propertyName
-index
-- Returns:
- true if serviced
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getMoInfo
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clearSg
protected void clearSg()- Overrides:
clearSg
in classIsosurface
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getShapeState
- Overrides:
getShapeState
in classIsosurface
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merge
Description copied from class:MeshCollection
called by ParallelProcessor at completion- Overrides:
merge
in classMeshCollection
- Parameters:
shape
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