deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: all
Depends: python3-importlib-metadata, python3-packaging, python3:any
Description: |-
efficient random access to fasta subsequences for Python 3
Samtools provides a function "faidx" (FAsta InDeX), which creates a
small flat index file ".fai" allowing for fast random access to any
subsequence in the indexed FASTA file, while loading a minimal amount of
the file in to memory. This Python module implements pure Python classes
for indexing, retrieval, and in-place modification of FASTA files using
a samtools compatible index. The pyfaidx module is API compatible with
the pygr seqdb module. A command-line script "faidx" is installed
alongside the pyfaidx module, and facilitates complex manipulation of
FASTA files without any programming knowledge.
.
This package provides the Python 3 modules to access fasta files.
Homepage: https://github.com/mdshw5/pyfaidx
Installed-Size: '125'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: python3-pyfaidx
Priority: optional
Recommends: python3-biopython
Section: python
Source: python-pyfaidx
Version: 0.8.1.3-1
srcpkg_name: python-pyfaidx
srcpkg_version: 0.8.1.3-1