sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-10.freexian.com
+==============================================================================+
| cyvcf2 0.31.1-2 (arm64) Thu, 24 Oct 2024 06:31:51 +0000 |
+==============================================================================+
Package: cyvcf2
Version: 0.31.1-2
Source Version: 0.31.1-2
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary
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Unpacking /var/lib/debusine/worker/system-images/872923/system.tar.xz to /tmp/tmp.sbuild.4se7fuWCIy...
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Get:1 file:/build/cyvcf2-2HLQoM/resolver-Gvy7Jb/apt_archive ./ InRelease
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Calculating upgrade...
The following packages will be upgraded:
apt base-passwd coreutils libapt-pkg6.0t64 libhtml-form-perl libkeyutils1
liblz1 libnet-ssleay-perl sysvinit-utils
9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
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Get:6 http://deb.debian.org/debian sid/main arm64 libhtml-form-perl all 6.12-1 [32.3 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3.1 [9256 B]
Get:8 http://deb.debian.org/debian sid/main arm64 liblz1 arm64 1.15~pre2-1 [38.1 kB]
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Local sources
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/tmp/debusine-fetch-exec-upload-ot7kwzxn/cyvcf2_0.31.1-2.dsc exists in /tmp/debusine-fetch-exec-upload-ot7kwzxn; copying to chroot
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| Install package build dependencies |
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Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, cython3, python3-setuptools, python3-all-dev, python3-numpy, python3-coloredlogs, python3-click, python3-pytest, libssl-dev, libcurl4-gnutls-dev | libcurl4-openssl-dev, libhts-dev, libbz2-dev, help2man, build-essential, fakeroot, dumb-init
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, cython3, python3-setuptools, python3-all-dev, python3-numpy, python3-coloredlogs, python3-click, python3-pytest, libssl-dev, libcurl4-gnutls-dev, libhts-dev, libbz2-dev, help2man, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
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Reading package lists...
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Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu help2man libasan8 libblas3
libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libelf1t64
libevent-2.1-7t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgmp-dev
libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev
libhts-dev libhts3t64 libhtscodecs2 libhwasan0 libidn2-dev libisl23 libitm1
libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3
liblocale-gettext-perl liblsan0 liblzma-dev libmpc3 libmpfr6 libncursesw6
libnghttp2-dev libnghttp3-dev libngtcp2-crypto-gnutls-dev libngtcp2-dev
libnsl2 libp11-kit-dev libpkgconf3 libpsl-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib librtmp-dev libssh2-1-dev
libssl-dev libstdc++-14-dev libtasn1-6-dev libtirpc-common libtirpc3t64
libtool libtsan2 libubsan1 libunbound8 libzstd-dev linux-libc-dev m4
media-types nettle-dev pkgconf pkgconf-bin po-debconf python3 python3-all
python3-all-dev python3-autocommand python3-click python3-colorama
python3-coloredlogs python3-dev python3-humanfriendly python3-inflect
python3-iniconfig python3-jaraco.context python3-jaraco.functools
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pkg-resources python3-pluggy python3-pytest python3-setuptools
python3-typeguard python3-typing-extensions python3-zipp python3.12
python3.12-dev python3.12-minimal python3.13 python3.13-dev
python3.13-minimal rpcsvc-proto zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc cython-doc dh-make flit python3-build python3-installer
python3-wheel gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
gdb-aarch64-linux-gnu libc-devtools glibc-doc libcurl4-doc libidn-dev
libkrb5-dev libldap2-dev gmp-doc libgmp10-doc libmpfr-dev dns-root-data
gnutls-bin gnutls-doc liblzma-doc libnghttp2-doc p11-kit-doc libssl-doc
libstdc++-14-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
libmail-box-perl python3-doc python3-tk python3-venv gfortran
python-numpy-doc python-setuptools-doc python3.12-venv python3.12-doc
binfmt-support python3.13-venv python3.13-doc
Recommended packages:
bzip2-doc manpages manpages-dev libarchive-cpio-perl javascript-common
libgpm2 libtasn1-doc libltdl-dev libmail-sendmail-perl python3-pygments
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu help2man libasan8 libblas3
libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libelf1t64
libevent-2.1-7t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgmp-dev
libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev
libhts-dev libhts3t64 libhtscodecs2 libhwasan0 libidn2-dev libisl23 libitm1
libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3
liblocale-gettext-perl liblsan0 liblzma-dev libmpc3 libmpfr6 libncursesw6
libnghttp2-dev libnghttp3-dev libngtcp2-crypto-gnutls-dev libngtcp2-dev
libnsl2 libp11-kit-dev libpkgconf3 libpsl-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib librtmp-dev libssh2-1-dev
libssl-dev libstdc++-14-dev libtasn1-6-dev libtirpc-common libtirpc3t64
libtool libtsan2 libubsan1 libunbound8 libzstd-dev linux-libc-dev m4
media-types nettle-dev pkgconf pkgconf-bin po-debconf python3 python3-all
python3-all-dev python3-autocommand python3-click python3-colorama
python3-coloredlogs python3-dev python3-humanfriendly python3-inflect
python3-iniconfig python3-jaraco.context python3-jaraco.functools
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pkg-resources python3-pluggy python3-pytest python3-setuptools
python3-typeguard python3-typing-extensions python3-zipp python3.12
python3.12-dev python3.12-minimal python3.13 python3.13-dev
python3.13-minimal rpcsvc-proto sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 139 newly installed, 0 to remove and 0 not upgraded.
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Get:10 http://deb.debian.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB]
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Get:17 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3 [78.4 kB]
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Get:24 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
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Get:27 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.4-1 [2440 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-7 [9164 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-7 [1280 B]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:39 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:40 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-7 [42.2 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-7 [24.2 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-7 [2578 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-7 [1162 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-7 [2386 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-7 [1040 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-7 [1442 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-7 [2365 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-7 [17.7 MB]
Get:49 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-7 [517 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:51 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:52 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-7 [2265 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-7 [10.1 MB]
Get:54 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-7 [20.0 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:56 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:57 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:58 http://deb.debian.org/debian sid/main arm64 cython3 arm64 3.0.11+dfsg-1 [2192 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:64 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:74 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:75 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 74.1.2-2 [736 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20240824 [109 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 help2man arm64 1.49.3 [198 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libbrotli-dev arm64 1.1.0-2+b4 [308 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10 [169 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libunbound8 arm64 1.22.0-1 [553 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libgnutls-dane0t64 arm64 3.8.6-2 [436 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 libgnutls-openssl27t64 arm64 3.8.6-2 [436 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libidn2-dev arm64 2.3.7-2 [122 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libp11-kit-dev arm64 0.25.5-2 [208 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 libtasn1-6-dev arm64 4.19.0-3+b2 [96.2 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b1 [329 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b1 [619 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 nettle-dev arm64 3.10-1 [1323 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libgnutls28-dev arm64 3.8.6-2 [1394 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 libnghttp2-dev arm64 1.63.0-1 [112 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 libnghttp3-dev arm64 1.4.0-1 [85.3 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 libngtcp2-crypto-gnutls-dev arm64 1.6.0-1 [23.7 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 libngtcp2-dev arm64 1.6.0-1 [165 kB]
Get:104 http://deb.debian.org/debian sid/main arm64 libpsl-dev arm64 0.21.2-1.1 [77.7 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b4 [67.3 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 libssl-dev arm64 3.3.2-1 [3185 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get:109 http://deb.debian.org/debian sid/main arm64 libzstd-dev arm64 1.5.6+dfsg-1 [330 kB]
Get:110 http://deb.debian.org/debian sid/main arm64 libcurl4-gnutls-dev arm64 8.10.1-2 [456 kB]
Get:111 http://deb.debian.org/debian sid/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get:112 http://deb.debian.org/debian sid/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB]
Get:113 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:114 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-7 [361 kB]
Get:115 http://deb.debian.org/debian sid/main arm64 libhtscodecs2 arm64 1.6.1-1 [74.6 kB]
Get:116 http://deb.debian.org/debian sid/main arm64 libhts3t64 arm64 1.20+ds-1 [416 kB]
Get:117 http://deb.debian.org/debian sid/main arm64 liblzma-dev arm64 5.6.2-2 [296 kB]
Get:118 http://deb.debian.org/debian sid/main arm64 libhts-dev arm64 1.20+ds-1 [1613 kB]
Get:119 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:120 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:121 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:122 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB]
Get:123 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:124 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:125 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:126 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:127 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:128 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:129 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:130 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
Get:131 http://deb.debian.org/debian sid/main arm64 python3-colorama all 0.4.6-4 [36.2 kB]
Get:132 http://deb.debian.org/debian sid/main arm64 python3-click all 8.1.7-2 [94.3 kB]
Get:133 http://deb.debian.org/debian sid/main arm64 python3-humanfriendly all 10.0-6 [85.6 kB]
Get:134 http://deb.debian.org/debian sid/main arm64 python3-coloredlogs all 15.0.1-1 [47.4 kB]
Get:135 http://deb.debian.org/debian sid/main arm64 python3-iniconfig all 1.1.1-2 [6396 B]
Get:136 http://deb.debian.org/debian sid/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB]
Get:137 http://deb.debian.org/debian sid/main arm64 python3-packaging all 24.1-1 [45.8 kB]
Get:138 http://deb.debian.org/debian sid/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get:139 http://deb.debian.org/debian sid/main arm64 python3-pytest all 8.3.3-1 [249 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Unpacking libpython3-stdlib:arm64 (3.12.6-1+debusine1) ...
Setting up python3-minimal (3.12.6-1+debusine1) ...
Selecting previously unselected package python3.
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Setting up libpython3.12-stdlib:arm64 (3.12.7-1) ...
Setting up python3.12 (3.12.7-1) ...
Setting up libpython3.12t64:arm64 (3.12.7-1) ...
Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libexpat1-dev:arm64 (2.6.3-1) ...
Setting up cpp-14 (14.2.0-7) ...
Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ...
Setting up cpp (4:14.2.0-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-7) ...
Setting up libpython3-stdlib:arm64 (3.12.6-1+debusine1) ...
Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14-aarch64-linux-gnu (14.2.0-7) ...
Setting up python3 (3.12.6-1+debusine1) ...
Setting up libpython3.12-dev:arm64 (3.12.7-1) ...
Setting up python3-zipp (3.20.2-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up gcc-14 (14.2.0-7) ...
Setting up python3-packaging (24.1-1) ...
Setting up python3-humanfriendly (10.0-6) ...
Setting up libpython3.13-dev:arm64 (3.13.0-1) ...
Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ...
Setting up python3.12-dev (3.12.7-1) ...
Setting up cython3 (3.0.11+dfsg-1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up libssh2-1-dev:arm64 (1.11.1-1) ...
Setting up python3-pluggy (1.5.0-1) ...
Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14 (14.2.0-7) ...
Setting up python3-coloredlogs (15.0.1-1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up libpython3-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libtool (2.4.7-7) ...
Setting up python3-colorama (0.4.6-4) ...
Setting up python3.13-dev (3.13.0-1) ...
Setting up python3-pytest (8.3.3-1) ...
Setting up python3-typeguard (4.3.0-1) ...
Setting up python3-all (3.12.6-1+debusine1) ...
Setting up python3-click (8.1.7-2) ...
Setting up libcurl4-gnutls-dev:arm64 (8.10.1-2) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up libpython3-all-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-dev (3.12.6-1+debusine1) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up python3-pkg-resources (74.1.2-2) ...
Setting up python3-all-dev (3.12.6-1+debusine1) ...
Setting up python3-setuptools (74.1.2-2) ...
Setting up libhts-dev:arm64 (1.20+ds-1) ...
Setting up debhelper (13.20) ...
Setting up python3-numpy (1:1.26.4+ds-11) ...
Setting up dh-python (6.20240824) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-7 gcc-14_14.2.0-7 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 linux-libc-dev_6.11.4-1
Package versions: appstream_1.0.3-1 apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1 cpp_4:14.2.0-1 cpp-14_14.2.0-7 cpp-14-aarch64-linux-gnu_14.2.0-7 cpp-aarch64-linux-gnu_4:14.2.0-1 cython3_3.0.11+dfsg-1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20240824 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-7 g++-14-aarch64-linux-gnu_14.2.0-7 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-7 gcc-14-aarch64-linux-gnu_14.2.0-7 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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: cyvcf2
Binary: python3-cyvcf2
Architecture: any
Version: 0.31.1-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>, Liubov Chuprikova <chuprikovalv@gmail.com>, Étienne Mollier <emollier@debian.org>
Homepage: https://github.com/brentp/cyvcf2
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/cyvcf2
Vcs-Git: https://salsa.debian.org/med-team/cyvcf2.git
Testsuite: autopkgtest, autopkgtest-pkg-python
Testsuite-Triggers: python3-all, python3-pytest
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, cython3, python3-setuptools, python3-all-dev, python3-numpy, python3-coloredlogs, python3-click, python3-pytest, libssl-dev, libcurl4-gnutls-dev | libcurl4-openssl-dev, libhts-dev, libbz2-dev, help2man <!nodoc>
Package-List:
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-----END PGP SIGNATURE-----
gpgv: Signature made Wed Jul 31 09:42:06 2024 UTC
gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./cyvcf2_0.31.1-2.dsc: no acceptable signature found
dpkg-source: info: extracting cyvcf2 in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking cyvcf2_0.31.1.orig.tar.gz
dpkg-source: info: unpacking cyvcf2_0.31.1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying i386.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package cyvcf2
dpkg-buildpackage: info: source version 0.31.1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
dpkg-source: info: using options from cyvcf2-0.31.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p "3.13 3.12"
I: pybuild base:311: python3.13 setup.py clean
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in <module>
from . import multiarray
File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in <module>
from . import overrides
File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in <module>
from numpy.core._multiarray_umath import (
add_docstring, _get_implementing_args, _ArrayFunctionDispatcher)
ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in <module>
from numpy.__config__ import show as show_config
File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in <module>
from numpy.core._multiarray_umath import (
...<3 lines>...
)
File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in <module>
raise ImportError(msg)
ImportError:
IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.
We have compiled some common reasons and troubleshooting tips at:
https://numpy.org/devdocs/user/troubleshooting-importerror.html
Please note and check the following:
* The Python version is: Python3.13 from "/usr/bin/python3.13"
* The NumPy version is: "1.26.4"
and make sure that they are the versions you expect.
Please carefully study the documentation linked above for further help.
Original error was: No module named 'numpy.core._multiarray_umath'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/<<PKGBUILDDIR>>/setup.py", line 20, in <module>
import numpy as np
File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in <module>
raise ImportError(msg) from e
ImportError: Error importing numpy: you should not try to import numpy from
its source directory; please exit the numpy source tree, and relaunch
your python interpreter from there.
E: pybuild pybuild:389: clean: plugin distutils failed with: exit code=1: python3.13 setup.py clean
dh_auto_clean: error: pybuild --clean -i python{version} -p "3.13 3.12" returned exit code 13
make: *** [debian/rules:17: clean] Error 25
dpkg-buildpackage: error: debian/rules clean subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2024-10-24T06:33:16Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: binary
Build-Space: 1608
Build-Time: 3
Distribution: sid
Fail-Stage: build
Host Architecture: arm64
Install-Time: 45
Job: /tmp/debusine-fetch-exec-upload-ot7kwzxn/cyvcf2_0.31.1-2.dsc
Machine Architecture: arm64
Package: cyvcf2
Package-Time: 85
Source-Version: 0.31.1-2
Space: 1608
Status: attempted
Version: 0.31.1-2
--------------------------------------------------------------------------------
Finished at 2024-10-24T06:33:16Z
Build needed 00:01:25, 1608k disk space