Artifact atropos_1.1.32+dfsg-2_arm64-2024-10-24T08:34:31Z

Metadata
bd_uninstallable: null
filename: atropos_1.1.32+dfsg-2_arm64-2024-10-24T08:34:31Z.build
source: atropos
version: 1.1.32+dfsg-2

File

atropos_1.1.32+dfsg-2_arm64-2024-10-24T08:34:31Z.build
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sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-07.freexian.com

+==============================================================================+
| atropos 1.1.32+dfsg-2 (arm64)                Thu, 24 Oct 2024 08:34:31 +0000 |
+==============================================================================+

Package: atropos
Version: 1.1.32+dfsg-2
Source Version: 1.1.32+dfsg-2
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/872923/system.tar.xz to /tmp/tmp.sbuild.GE_gAKXF2M...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/libpython3-all-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
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Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/libpython3-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/libpython3-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
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Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/python3-all_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
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Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/python3-venv_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/python3_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/2to3_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/idle_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/python3-doc_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-kz2zgyew/python3-examples_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/atropos-8EdCWo/resolver-abMlwL' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 file:/build/atropos-8EdCWo/resolver-brKFlw/apt_archive ./ InRelease
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Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/atropos-8EdCWo/resolver-brKFlw/apt_archive ./ Release [609 B]
Get:4 file:/build/atropos-8EdCWo/resolver-brKFlw/apt_archive ./ Release.gpg
Ign:4 file:/build/atropos-8EdCWo/resolver-brKFlw/apt_archive ./ Release.gpg
Get:5 file:/build/atropos-8EdCWo/resolver-brKFlw/apt_archive ./ Packages [20.5 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9914 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4912 kB]
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Reading package lists...
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Building dependency tree...
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Calculating upgrade...
The following packages will be upgraded:
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  liblz1 libnet-ssleay-perl sysvinit-utils
9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 5601 kB of archives.
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Get:4 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.10 [1332 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 sysvinit-utils arm64 3.11-1 [33.0 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 libhtml-form-perl all 6.12-1 [32.3 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3.1 [9256 B]
Get:8 http://deb.debian.org/debian sid/main arm64 liblz1 arm64 1.15~pre2-1 [38.1 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libnet-ssleay-perl arm64 1.94-2 [323 kB]
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+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/tmp/debusine-fetch-exec-upload-kz2zgyew/atropos_1.1.32+dfsg-2.dsc exists in /tmp/debusine-fetch-exec-upload-kz2zgyew; copying to chroot
I: NOTICE: Log filtering will replace 'build/atropos-8EdCWo/atropos-1.1.32+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/atropos-8EdCWo' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-loguru, python3-xphyle, python3-pytest, python3-jinja2, python3-pysam, build-essential, fakeroot, dumb-init
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-loguru, python3-xphyle, python3-pytest, python3-jinja2, python3-pysam, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
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Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
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Reading package lists...
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Reading package lists...
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Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
  g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libc-dev-bin
  libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 libelf1t64
  libexpat1 libexpat1-dev libfakeroot libfile-stripnondeterminism-perl
  libgcc-14-dev libhts3t64 libhtscodecs2 libhwasan0 libisl23 libitm1
  libjs-jquery libjs-sphinxdoc libjs-underscore liblsan0 libmpc3 libmpfr6
  libncursesw6 libnsl2 libpython3-all-dev libpython3-dev libpython3-stdlib
  libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
  libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal
  libpython3.13-stdlib libstdc++-14-dev libtirpc-common libtirpc3t64 libtool
  libtsan2 libubsan1 linux-libc-dev m4 media-types po-debconf python3
  python3-all python3-all-dev python3-autocommand python3-colorama python3-dev
  python3-inflect python3-iniconfig python3-jaraco.context
  python3-jaraco.functools python3-jinja2 python3-loguru python3-markupsafe
  python3-minimal python3-more-itertools python3-packaging
  python3-pkg-resources python3-pluggy python3-pokrok python3-pysam
  python3-pytest python3-setuptools python3-setuptools-scm python3-typeguard
  python3-typing-extensions python3-wheel python3-xphyle python3-zipp
  python3.12 python3.12-dev python3.12-minimal python3.13 python3.13-dev
  python3.13-minimal rpcsvc-proto zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
  cpp-14-doc cython-doc dh-make flit python3-build python3-installer
  gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gdb-aarch64-linux-gnu libc-devtools glibc-doc libstdc++-14-doc libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-doc
  python3-tk python3-venv python-jinja2-doc python-setuptools-doc
  python3.12-venv python3.12-doc binfmt-support python3.13-venv python3.13-doc
Recommended packages:
  manpages manpages-dev libarchive-cpio-perl javascript-common libgpm2
  libltdl-dev libmail-sendmail-perl python3-babel python3-pygments
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
  g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libc-dev-bin
  libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 libelf1t64
  libexpat1 libexpat1-dev libfakeroot libfile-stripnondeterminism-perl
  libgcc-14-dev libhts3t64 libhtscodecs2 libhwasan0 libisl23 libitm1
  libjs-jquery libjs-sphinxdoc libjs-underscore liblsan0 libmpc3 libmpfr6
  libncursesw6 libnsl2 libpython3-all-dev libpython3-dev libpython3-stdlib
  libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
  libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal
  libpython3.13-stdlib libstdc++-14-dev libtirpc-common libtirpc3t64 libtool
  libtsan2 libubsan1 linux-libc-dev m4 media-types po-debconf python3
  python3-all python3-all-dev python3-autocommand python3-colorama python3-dev
  python3-inflect python3-iniconfig python3-jaraco.context
  python3-jaraco.functools python3-jinja2 python3-loguru python3-markupsafe
  python3-minimal python3-more-itertools python3-packaging
  python3-pkg-resources python3-pluggy python3-pokrok python3-pysam
  python3-pytest python3-setuptools python3-setuptools-scm python3-typeguard
  python3-typing-extensions python3-wheel python3-xphyle python3-zipp
  python3.12 python3.12-dev python3.12-minimal python3.13 python3.13-dev
  python3.13-minimal rpcsvc-proto sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 109 newly installed, 0 to remove and 0 not upgraded.
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Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B]
Get:2 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ python3-minimal 3.12.6-1+debusine1 [26.8 kB]
Get:3 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ libpython3-stdlib 3.12.6-1+debusine1 [9732 B]
Get:4 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ python3 3.12.6-1+debusine1 [27.8 kB]
Get:5 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ libpython3-dev 3.12.6-1+debusine1 [9992 B]
Get:6 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ libpython3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:7 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ python3-all 3.12.6-1+debusine1 [1056 B]
Get:8 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ python3-dev 3.12.6-1+debusine1 [26.1 kB]
Get:9 file:/<<BUILDDIR>>/resolver-brKFlw/apt_archive ./ python3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:10 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.7-1 [807 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.3-1 [90.2 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.7-1 [1941 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2 [124 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3 [78.4 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b2 [37.7 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.7-1 [1901 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.7-1 [671 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libpython3.13-minimal arm64 3.13.0-1 [849 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 python3.13-minimal arm64 3.13.0-1 [1835 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.4-1 [2440 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
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Get:35 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-7 [9164 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-7 [1280 B]
Get:37 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:39 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-7 [42.2 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-7 [24.2 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-7 [2578 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-7 [1162 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-7 [2386 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-7 [1040 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-7 [1442 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-7 [2365 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-7 [17.7 MB]
Get:48 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-7 [517 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
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Get:51 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-7 [2265 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-7 [10.1 MB]
Get:53 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-7 [20.0 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:55 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:56 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:57 http://deb.debian.org/debian sid/main arm64 cython3 arm64 3.0.11+dfsg-1 [2192 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
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Get:63 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:73 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB]
Get:75 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 74.1.2-2 [736 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20240824 [109 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 libhtscodecs2 arm64 1.6.1-1 [74.6 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libhts3t64 arm64 1.20+ds-1 [416 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 python3-colorama all 0.4.6-4 [36.2 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 python3-iniconfig all 1.1.1-2 [6396 B]
Get:99 http://deb.debian.org/debian sid/main arm64 python3-markupsafe arm64 2.1.5-1+b1 [13.7 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 python3-jinja2 all 3.1.3-1 [119 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 python3-loguru all 0.7.2-3 [58.4 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 python3-packaging all 24.1-1 [45.8 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get:104 http://deb.debian.org/debian sid/main arm64 python3-pokrok all 0.2.0-5 [11.3 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 python3-pysam arm64 0.22.1+ds-2+b1 [3244 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 python3-pytest all 8.3.3-1 [249 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 python3-setuptools-scm all 8.1.0-1 [40.5 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 python3-wheel all 0.44.0-2 [53.4 kB]
Get:109 http://deb.debian.org/debian sid/main arm64 python3-xphyle all 4.4.4-5 [52.2 kB]
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+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-7 gcc-14_14.2.0-7 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 linux-libc-dev_6.11.4-1
Package versions: appstream_1.0.3-1 apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1 cpp_4:14.2.0-1 cpp-14_14.2.0-7 cpp-14-aarch64-linux-gnu_14.2.0-7 cpp-aarch64-linux-gnu_4:14.2.0-1 cython3_3.0.11+dfsg-1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20240824 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-7 g++-14-aarch64-linux-gnu_14.2.0-7 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-7 gcc-14-aarch64-linux-gnu_14.2.0-7 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libpython3.13_3.13.0-1 libpython3.13-dev_3.13.0-1 libpython3.13-minimal_3.13.0-1 libpython3.13-stdlib_3.13.0-1 libreadline8t64_8.2-5 libregexp-wildcards-perl_1.05-3 librole-tiny-perl_2.002004-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b1 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsereal-decoder-perl_5.004+ds-1+b3 libsereal-encoder-perl_5.004+ds-1+b3 libsframe1_2.43.1-5 libsmartcols1_2.40.2-9 libsort-versions-perl_1.62-3 libsqlite3-0_3.46.1-1 libss2_1.47.1-1 libssh2-1t64_1.11.1-1 libssl3t64_3.3.2-1 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 libstemmer0d_2.2.0-4+b1 libstrictures-perl_2.000006-1 libsub-exporter-perl_0.990-1 libsub-exporter-progressive-perl_0.001013-3 libsub-identify-perl_0.14-3+b3 libsub-install-perl_0.929-1 libsub-name-perl_0.27-1+b3 libsub-quote-perl_2.006008-1 libsyntax-keyword-try-perl_0.30-1+b1 libsystemd0_256.7-2 libtasn1-6_4.19.0-3+b2 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python3-pokrok_0.2.0-5 python3-pysam_0.22.1+ds-2+b1 python3-pytest_8.3.3-1 python3-setuptools_74.1.2-2 python3-setuptools-scm_8.1.0-1 python3-typeguard_4.3.0-1 python3-typing-extensions_4.12.2-2 python3-wheel_0.44.0-2 python3-xphyle_4.4.4-5 python3-zipp_3.20.2-1 python3.12_3.12.7-1 python3.12-dev_3.12.7-1 python3.12-minimal_3.12.7-1 python3.13_3.13.0-1 python3.13-dev_3.13.0-1 python3.13-minimal_3.13.0-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4 tar_1.35+dfsg-3 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28 util-linux_2.40.2-9 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 3.0 (quilt)
Source: atropos
Binary: atropos
Architecture: any
Version: 1.1.32+dfsg-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/jdidion/atropos
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/atropos
Vcs-Git: https://salsa.debian.org/med-team/atropos.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all, python3-pytest
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-setuptools-scm, python3-wheel, python3-loguru, python3-xphyle, python3-pytest <!nocheck>, python3-jinja2 <!nocheck>, python3-pysam <!nocheck>
Package-List:
 atropos deb science optional arch=any
Checksums-Sha1:
 dc01c3a946454c29bd092ab6a12fe63681f95c73 3116652 atropos_1.1.32+dfsg.orig.tar.xz
 f5573ed2b77f40e463b24162d2f656f4eb0a99f5 6800 atropos_1.1.32+dfsg-2.debian.tar.xz
Checksums-Sha256:
 efb5aef489afa25b1e3990d0320d1fedb32d84147c52bcf67cd9759170da0eed 3116652 atropos_1.1.32+dfsg.orig.tar.xz
 691210b4b544206b89d4f979713002f19e3e6bc4fef07cd0289782b96ccdd77f 6800 atropos_1.1.32+dfsg-2.debian.tar.xz
Files:
 feac304ad9679649959f69ace8899da1 3116652 atropos_1.1.32+dfsg.orig.tar.xz
 cd7c6edbbe1d3eee2bc386c019e378a7 6800 atropos_1.1.32+dfsg-2.debian.tar.xz

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gpgv: Signature made Wed Jul 31 09:03:58 2024 UTC
gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./atropos_1.1.32+dfsg-2.dsc: no acceptable signature found
dpkg-source: info: extracting atropos in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking atropos_1.1.32+dfsg.orig.tar.xz
dpkg-source: info: unpacking atropos_1.1.32+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying no_install_depends_cython.patch
dpkg-source: info: applying cy3

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package atropos
dpkg-buildpackage: info: source version 1.1.32+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:311: python3.13 setup.py clean 
/<<PKGBUILDDIR>>/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
  ] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
I: pybuild base:311: python3.12 setup.py clean 
/<<PKGBUILDDIR>>/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
  ] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
rm -rf  .pytest_cache
rm -rf atropos.egg-info
rm -f atropos/align/_align.c atropos/commands/trim/_qualtrim.c atropos/io/_seqio.c
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config 
/<<PKGBUILDDIR>>/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
  ] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running config
I: pybuild base:311: python3.12 setup.py config 
/<<PKGBUILDDIR>>/versioneer.py:494: SyntaxWarning: invalid escape sequence '\s'
  ] = '''
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py build 
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos
copying atropos/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos
copying atropos/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_atropos.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_paired.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_xopen.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_adapters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_seqio.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_modifiers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_commands.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
copying tests/test_trim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util
copying atropos/util/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util
copying atropos/util/colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/compression.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/progress.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io
copying atropos/io/seqio.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align
copying atropos/align/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
copying atropos/commands/legacy_report.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters
copying atropos/adapters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/writers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/modifiers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
copying atropos/commands/trim/filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc
copying atropos/commands/qc/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect
copying atropos/commands/detect/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/commands/error/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error
copying atropos/adapters/sequencing_adapters.fa -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/_version.py to '1.1.32'
running build_ext
/<<PKGBUILDDIR>>/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
  if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
Compiling atropos/align/_align.pyx because it changed.
Compiling atropos/commands/trim/_qualtrim.pyx because it changed.
Compiling atropos/io/_seqio.pyx because it changed.
[1/3] Cythonizing atropos/align/_align.pyx
[2/3] Cythonizing atropos/commands/trim/_qualtrim.pyx
[3/3] Cythonizing atropos/io/_seqio.pyx
building 'atropos.align._align' extension
creating build
creating build/temp.linux-aarch64-cpython-313
creating build/temp.linux-aarch64-cpython-313/atropos
creating build/temp.linux-aarch64-cpython-313/atropos/align
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/align/_align.c -o build/temp.linux-aarch64-cpython-313/atropos/align/_align.o
atropos/align/_align.c:2466:9: warning: ‘Py_UNICODE’ is deprecated [-Wdeprecated-declarations]
 2466 |         Py_UNICODE *as_pyunicodes;
      |         ^~~~~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/atropos/align/_align.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align/_align.cpython-313-aarch64-linux-gnu.so
building 'atropos.commands.trim._qualtrim' extension
creating build/temp.linux-aarch64-cpython-313/atropos/commands
creating build/temp.linux-aarch64-cpython-313/atropos/commands/trim
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/commands/trim/_qualtrim.c -o build/temp.linux-aarch64-cpython-313/atropos/commands/trim/_qualtrim.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/atropos/commands/trim/_qualtrim.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/_qualtrim.cpython-313-aarch64-linux-gnu.so
building 'atropos.io._seqio' extension
creating build/temp.linux-aarch64-cpython-313/atropos/io
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c atropos/io/_seqio.c -o build/temp.linux-aarch64-cpython-313/atropos/io/_seqio.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/atropos/io/_seqio.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/_seqio.cpython-313-aarch64-linux-gnu.so
running build_scripts
creating build/scripts-3.13
copying and adjusting bin/atropos -> build/scripts-3.13
changing mode of build/scripts-3.13/atropos from 644 to 755
I: pybuild base:311: /usr/bin/python3 setup.py build 
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos
copying atropos/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos
copying atropos/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_atropos.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_paired.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_xopen.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_adapters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_seqio.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_modifiers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_commands.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
copying tests/test_trim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util
copying atropos/util/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util
copying atropos/util/colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/compression.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/progress.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io
copying atropos/io/seqio.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align
copying atropos/align/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
copying atropos/commands/legacy_report.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters
copying atropos/adapters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/writers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/multicore.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/modifiers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
copying atropos/commands/trim/filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc
copying atropos/commands/qc/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect
copying atropos/commands/detect/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/commands/error/reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error
copying atropos/adapters/sequencing_adapters.fa -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/_version.py to '1.1.32'
running build_ext
/<<PKGBUILDDIR>>/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
  if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
building 'atropos.align._align' extension
creating build/temp.linux-aarch64-cpython-312
creating build/temp.linux-aarch64-cpython-312/atropos
creating build/temp.linux-aarch64-cpython-312/atropos/align
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/align/_align.c -o build/temp.linux-aarch64-cpython-312/atropos/align/_align.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/atropos/align/_align.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align/_align.cpython-312-aarch64-linux-gnu.so
building 'atropos.commands.trim._qualtrim' extension
creating build/temp.linux-aarch64-cpython-312/atropos/commands
creating build/temp.linux-aarch64-cpython-312/atropos/commands/trim
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/commands/trim/_qualtrim.c -o build/temp.linux-aarch64-cpython-312/atropos/commands/trim/_qualtrim.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/atropos/commands/trim/_qualtrim.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/_qualtrim.cpython-312-aarch64-linux-gnu.so
building 'atropos.io._seqio' extension
creating build/temp.linux-aarch64-cpython-312/atropos/io
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c atropos/io/_seqio.c -o build/temp.linux-aarch64-cpython-312/atropos/io/_seqio.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/atropos/io/_seqio.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/_seqio.cpython-312-aarch64-linux-gnu.so
running build_scripts
creating build/scripts-3.12
copying and adjusting bin/atropos -> build/scripts-3.12
changing mode of build/scripts-3.12/atropos from 644 to 755
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
\
dh_auto_test -- --before-test="ln -s /<<PKGBUILDDIR>>/tests/cut {build_dir}/tests && ln -s /<<PKGBUILDDIR>>/tests/data {build_dir}/tests"
I: pybuild pybuild:308: ln -s /<<PKGBUILDDIR>>/tests/cut /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests && ln -s /<<PKGBUILDDIR>>/tests/data /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build; python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build
configfile: pytest.ini
plugins: typeguard-4.3.0
collected 222 items

tests/test_adapters.py ........                                          [  3%]
tests/test_align.py ................                                     [ 10%]
tests/test_atropos.py .................................................. [ 33%]
............................s                                            [ 46%]
tests/test_colorspace.py .................                               [ 54%]
tests/test_commands.py .                                                 [ 54%]
tests/test_filters.py ..                                                 [ 55%]
tests/test_modifiers.py ....................                             [ 64%]
tests/test_multicore.py .....                                            [ 66%]
tests/test_paired.py ................................                    [ 81%]
tests/test_qualtrim.py .                                                 [ 81%]
tests/test_seqio.py ...................................                  [ 97%]
tests/test_trim.py ..                                                    [ 98%]
tests/test_xopen.py ....                                                 [100%]

=============================== warnings summary ===============================
tests/test_paired.py:638
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.timeout(10)

tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_summary
tests/test_paired.py::test_summary
  /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=172) is multi-threaded, use of fork() may lead to deadlocks in the child.
    self.pid = os.fork()

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================= 221 passed, 1 skipped, 5 warnings in 32.67s ==================
I: pybuild pybuild:308: ln -s /<<PKGBUILDDIR>>/tests/cut /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests && ln -s /<<PKGBUILDDIR>>/tests/data /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build; python3.12 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build
configfile: pytest.ini
plugins: typeguard-4.3.0
collected 222 items

tests/test_adapters.py ........                                          [  3%]
tests/test_align.py ................                                     [ 10%]
tests/test_atropos.py .................................................. [ 33%]
............................s                                            [ 46%]
tests/test_colorspace.py .................                               [ 54%]
tests/test_commands.py .                                                 [ 54%]
tests/test_filters.py ..                                                 [ 55%]
tests/test_modifiers.py ....................                             [ 64%]
tests/test_multicore.py .....                                            [ 66%]
tests/test_paired.py ................................                    [ 81%]
tests/test_qualtrim.py .                                                 [ 81%]
tests/test_seqio.py ...................................                  [ 97%]
tests/test_trim.py ..                                                    [ 98%]
tests/test_xopen.py ....                                                 [100%]

=============================== warnings summary ===============================
tests/test_paired.py:638
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_paired.py:638: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.timeout(10)

tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_no_writer_process
tests/test_paired.py::test_summary
tests/test_paired.py::test_summary
  /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=622) is multi-threaded, use of fork() may lead to deadlocks in the child.
    self.pid = os.fork()

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================= 221 passed, 1 skipped, 5 warnings in 32.97s ==================
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=pybuild
   dh_prep -O--buildsystem=pybuild
   dh_auto_install --destdir=debian/atropos/ -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /<<PKGBUILDDIR>>/debian/atropos 
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/_version.py to '1.1.32'
running build_ext
/<<PKGBUILDDIR>>/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
  if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/atropos/usr
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/__pycache__/_version.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/_version.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util/__pycache__/colorspace.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/util/colorspace.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/compression.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/_seqio.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/seqio.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/compression.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/progress.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/io/seqio.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/align/_align.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/writers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/qualtrim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/_qualtrim.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/writers.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/filters.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/reports.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/multicore.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/modifiers.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/cli.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/__pycache__/qualtrim.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/modifiers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/trim/filters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/stats.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/base.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/reports.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/multicore.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/cli.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/legacy_report.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc/__pycache__/cli.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/qc/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect/__pycache__/cli.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/detect/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/stats.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/base.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/legacy_report.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error/__pycache__/cli.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/commands/error/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters/sequencing_adapters.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/atropos/adapters/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_atropos.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_filters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small.trimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/suffix.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/anywhere_repeat.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/anchored_no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/454.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/lowercase.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxlen.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/lowq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-untrimmed.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/SRR2040662_trimmed.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-trimmed.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/back_repeat.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/overlapa.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solidmaq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/plus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/unconditional-back.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/issue46.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/examplefront.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired.m14.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/no-trim.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/wildcard_adapter_anywhere.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/illumina.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/pairedu.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solidqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small_mincut3.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/sra.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-separate.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small.untrimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small_mincut2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/pairedq.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/minlen.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.notrim.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/illumina.info.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-trimmed.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/discard.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/trimN3.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/highq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/discard-untrimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/lowqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired.m14.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/overlapb.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/empty.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/illumina5.info.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/illumina5.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/minlen.noprimer.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-onlyA.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/wildcard_adapter.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxn0.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis2_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/example.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/linked.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.notrim.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solidbfast.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/wildcardN.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxn0.2.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxn2.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-m27.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_bis1_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/stripped.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/back_repeat.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/rest.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-too-short.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.first.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/nextseq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxn1.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-separate.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/anchored_no_indels_wildcard.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/issue68.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-untrimmed.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/unconditional-front.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/issue68.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/empty.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/wildcard.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/s_1_sequence.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.second.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/pairedu.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/maxn0.4.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/polya.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-too-short.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid5p-anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/dos.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/small_mincut1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-m27.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/pairedq.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/restfront.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/twoadapters.unknown.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/unconditional-both.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-onlyA.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/interleaved.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/trimN5.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/anchored-back.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired-filterboth_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/paired_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/illumina64.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/cut/solid-no-zerocap.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_paired.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/utils.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_xopen.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_colorspace.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_align.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_xopen.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_seqio.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_qualtrim.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_commands.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_adapters.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_atropos.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_modifiers.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_multicore.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/utils.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_paired.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_trim.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/__pycache__/test_filters.cpython-313-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_adapters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_seqio.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_colorspace.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/small.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/anywhere_repeat.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/anchored_no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/454.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/suffix-adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/E3M.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/lowq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/back_repeat.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/overlapa.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/plus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/issue46.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/toolong.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/tooshort.noprimer.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/withplus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/twoadapters.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/sra.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired_bis_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/maxn.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/trimN3.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/highq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/big.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/lowqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/simple.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/big.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/overlapb.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid5p.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/restfront.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid.csfasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/bad_bases.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/small.fastq.xz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/illumina5.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/s_1_sequence.txt.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/small.myownextension -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/wildcard_adapter.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/prefix-adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired_bis_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/example.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/small.fastq.bz2 -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/linked.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/multiblock.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/wildcardN.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/back_repeat.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/rest.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/lengths.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/small.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/nextseq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/E3M.qual -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/rest.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/issue68.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/issue68.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid5p.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired_bis_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/empty.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/simple.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/wildcard.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/polya.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/dos.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/solid.qual -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/tooshort.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/interleaved.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/trimN5.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/anchored-back.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/paired_bis_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/illumina64.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/data/illumina.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_align.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_modifiers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_commands.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_qualtrim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tests/test_trim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.adapters -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.pytest_cache/CACHEDIR.TAG -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.pytest_cache/.gitignore -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.pytest_cache/v/cache/nodeids -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.pytest_cache/v/cache/stepwise -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/.pytest_cache/README.md -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/.pytest_cache
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/_version.py to _version.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/util/colorspace.py to colorspace.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/compression.py to compression.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/progress.py to progress.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/io/seqio.py to seqio.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/align/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/cli.py to cli.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/reports.py to reports.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/writers.py to writers.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/cli.py to cli.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/qualtrim.py to qualtrim.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/reports.py to reports.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/multicore.py to multicore.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/modifiers.py to modifiers.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/trim/filters.py to filters.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/cli.py to cli.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/qc/reports.py to reports.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/cli.py to cli.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/detect/reports.py to reports.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/multicore.py to multicore.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/stats.py to stats.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/base.py to base.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/legacy_report.py to legacy_report.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/cli.py to cli.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/commands/error/reports.py to reports.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos/adapters/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_atropos.py to test_atropos.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_filters.py to test_filters.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_paired.py to test_paired.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/utils.py to utils.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_xopen.py to test_xopen.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_multicore.py to test_multicore.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_adapters.py to test_adapters.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_seqio.py to test_seqio.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_colorspace.py to test_colorspace.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_align.py to test_align.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_modifiers.py to test_modifiers.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_commands.py to test_commands.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_qualtrim.py to test_qualtrim.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/tests/test_trim.py to test_trim.cpython-313.pyc
running install_egg_info
running egg_info
creating atropos.egg-info
writing atropos.egg-info/PKG-INFO
writing dependency_links to atropos.egg-info/dependency_links.txt
writing requirements to atropos.egg-info/requires.txt
writing top-level names to atropos.egg-info/top_level.txt
writing manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.rst'
warning: no files found matching 'LICENSE.txt'
warning: no files found matching 'atropos/report/templates/*'
adding license file 'LICENSE'
writing manifest file 'atropos.egg-info/SOURCES.txt'
Copying atropos.egg-info to /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.13/dist-packages/atropos-1.1.32.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/atropos/usr/bin
copying build/scripts-3.13/atropos -> /<<PKGBUILDDIR>>/debian/atropos/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/atropos/usr/bin/atropos to 755
I: pybuild base:311: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/atropos 
/usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options
!!

        ********************************************************************************
        Usage of dash-separated 'description-file' will not be supported in future
        versions. Please use the underscore name 'description_file' instead.

        This deprecation is overdue, please update your project and remove deprecated
        calls to avoid build errors in the future.

        See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
        ********************************************************************************

!!
  opt = self.warn_dash_deprecation(opt, section)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require'
  warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/_version.py to '1.1.32'
running build_ext
/<<PKGBUILDDIR>>/setup.py:84: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
  if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/__pycache__/_version.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/_version.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util/__pycache__/colorspace.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/util/colorspace.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/compression.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/compression.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/__pycache__/seqio.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/progress.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/_seqio.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/io/seqio.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/align/_align.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/_qualtrim.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/writers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/qualtrim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/writers.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/cli.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/qualtrim.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/filters.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/modifiers.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/reports.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/multicore.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/modifiers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/trim/filters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/base.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/cli.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/legacy_report.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/reports.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/multicore.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/stats.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc/__pycache__/cli.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/qc/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect/__pycache__/cli.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/detect/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/stats.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/base.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/legacy_report.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error/cli.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error/reports.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error/__pycache__/cli.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/commands/error/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters/sequencing_adapters.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/atropos/adapters/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__pycache__
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_atropos.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_filters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small.trimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/suffix.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/anywhere_repeat.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/anchored_no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/454.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/lowercase.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxlen.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/lowq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-untrimmed.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/SRR2040662_trimmed.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-trimmed.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/back_repeat.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/overlapa.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solidmaq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/plus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/unconditional-back.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/issue46.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/examplefront.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired.m14.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/no-trim.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/wildcard_adapter_anywhere.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/illumina.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/pairedu.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solidqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small_mincut3.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/sra.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-separate.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small.untrimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small_mincut2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/pairedq.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/minlen.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.notrim.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/illumina.info.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-trimmed.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/discard.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/trimN3.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/highq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/discard-untrimmed.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/lowqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired.m14.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/overlapb.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/empty.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/illumina5.info.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/illumina5.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/minlen.noprimer.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-onlyA.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/wildcard_adapter.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxn0.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis2_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/example.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/linked.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.notrim.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solidbfast.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/wildcardN.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxn0.2.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxn2.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-m27.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_bis1_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/stripped.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/back_repeat.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/rest.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-too-short.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.first.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/nextseq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxn1.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-separate.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/anchored_no_indels_wildcard.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/issue68.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-untrimmed.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/unconditional-front.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/issue68.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/empty.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/wildcard.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/s_1_sequence.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.second.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/pairedu.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/maxn0.4.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/polya.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-too-short.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid5p-anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/dos.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/small_mincut1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-m27.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/pairedq.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/restfront.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/twoadapters.unknown.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/unconditional-both.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-onlyA.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/interleaved.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/trimN5.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/anchored-back.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired-filterboth_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/paired_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/illumina64.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/cut/solid-no-zerocap.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/cut
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_paired.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/utils.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_xopen.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_multicore.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_commands.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_trim.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_colorspace.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_modifiers.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_paired.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_align.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_xopen.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_adapters.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_filters.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_multicore.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_qualtrim.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_atropos.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/utils.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/test_seqio.cpython-312-pytest-8.3.3.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_adapters.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_seqio.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_colorspace.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/small.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/anywhere_repeat.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/anchored_no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/454.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/suffix-adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/E3M.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/lowq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/no_indels.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/back_repeat.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/overlapa.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/plus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/issue46.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/toolong.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/tooshort.noprimer.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/withplus.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/twoadapters.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/sra.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired_bis_insert.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/maxn.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/trimN3.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/highq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/big.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/lowqual.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/simple.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/big.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/overlapb.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid5p.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/restfront.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid.csfasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/bad_bases.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/small.fastq.xz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/illumina5.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/s_1_sequence.txt.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/small.myownextension -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/anchored.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/wildcard_adapter.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/prefix-adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired_bis_adapter.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/example.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/small.fastq.bz2 -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/linked.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/multiblock.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/wildcardN.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/back_repeat.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/rest.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/lengths.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/small.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/nextseq.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/E3M.qual -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/rest.txt -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/issue68.2.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/issue68.1.fq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid5p.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired_bis_adapter.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/empty.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/simple.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/wildcard.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/polya.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired.1.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/dos.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/solid.qual -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/tooshort.fa -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/adapter.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/interleaved.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/trimN5.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/anchored-back.fasta -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/paired_bis_insert.2.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/illumina64.fastq -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/data/illumina.fastq.gz -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_align.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_modifiers.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_commands.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_qualtrim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/tests/test_trim.py -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.adapters -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.pytest_cache/CACHEDIR.TAG -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.pytest_cache/.gitignore -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v
creating /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/nodeids -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/stepwise -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/.pytest_cache/README.md -> /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/.pytest_cache
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/_version.py to _version.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/util/colorspace.py to colorspace.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/compression.py to compression.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/progress.py to progress.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/io/seqio.py to seqio.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/align/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/cli.py to cli.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/reports.py to reports.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/writers.py to writers.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/cli.py to cli.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/qualtrim.py to qualtrim.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/reports.py to reports.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/multicore.py to multicore.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/modifiers.py to modifiers.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/trim/filters.py to filters.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/cli.py to cli.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/qc/reports.py to reports.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/cli.py to cli.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/detect/reports.py to reports.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/multicore.py to multicore.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/stats.py to stats.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/base.py to base.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/legacy_report.py to legacy_report.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/cli.py to cli.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/commands/error/reports.py to reports.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos/adapters/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_atropos.py to test_atropos.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_filters.py to test_filters.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_paired.py to test_paired.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/utils.py to utils.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_xopen.py to test_xopen.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_multicore.py to test_multicore.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_adapters.py to test_adapters.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_seqio.py to test_seqio.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_colorspace.py to test_colorspace.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_align.py to test_align.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_modifiers.py to test_modifiers.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_commands.py to test_commands.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_qualtrim.py to test_qualtrim.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/tests/test_trim.py to test_trim.cpython-312.pyc
running install_egg_info
running egg_info
writing atropos.egg-info/PKG-INFO
writing dependency_links to atropos.egg-info/dependency_links.txt
writing requirements to atropos.egg-info/requires.txt
writing top-level names to atropos.egg-info/top_level.txt
reading manifest file 'atropos.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.rst'
warning: no files found matching 'LICENSE.txt'
warning: no files found matching 'atropos/report/templates/*'
adding license file 'LICENSE'
writing manifest file 'atropos.egg-info/SOURCES.txt'
Copying atropos.egg-info to /<<PKGBUILDDIR>>/debian/atropos/usr/lib/python3.12/dist-packages/atropos-1.1.32.egg-info
Skipping SOURCES.txt
running install_scripts
copying build/scripts-3.12/atropos -> /<<PKGBUILDDIR>>/debian/atropos/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/atropos/usr/bin/atropos to 755
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
find debian -type d -name __pycache__ | xargs rm -rf
find debian -type d -name tests       | xargs rm -rf
find debian -type f -name .adapters -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -O--buildsystem=pybuild
   dh_installchangelogs -O--buildsystem=pybuild
   dh_installman -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
   dh_installsystemduser -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   dh_compress -O--buildsystem=pybuild
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'atropos' in '../atropos_1.1.32+dfsg-2_arm64.deb'.
dpkg-deb: building package 'atropos-dbgsym' in '../atropos-dbgsym_1.1.32+dfsg-2_arm64.deb'.
 dpkg-genbuildinfo --build=binary -O../atropos_1.1.32+dfsg-2_arm64.buildinfo
 dpkg-genchanges --build=binary -O../atropos_1.1.32+dfsg-2_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-10-24T08:37:37Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


atropos_1.1.32+dfsg-2_arm64.changes:
------------------------------------

Format: 1.8
Date: Wed, 31 Jul 2024 10:59:45 +0200
Source: atropos
Binary: atropos atropos-dbgsym
Architecture: arm64
Version: 1.1.32+dfsg-2
Distribution: sid
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
 atropos    - NGS read trimming tool that is specific, sensitive, and speedy
Changes:
 atropos (1.1.32+dfsg-2) unstable; urgency=medium
 .
   * Team upload.
   * Switch back to Cython3, it works.
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Files:
 244fa1fcaf8cd454d8fd36b5fb4fe8b7 1232756 debug optional atropos-dbgsym_1.1.32+dfsg-2_arm64.deb
 71dc555760d7bcad65c6de53b35c9828 7673 science optional atropos_1.1.32+dfsg-2_arm64.buildinfo
 4399bedf390291e85416f7c43d99b3d1 234752 science optional atropos_1.1.32+dfsg-2_arm64.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: atropos
Binary: atropos atropos-dbgsym
Architecture: arm64
Version: 1.1.32+dfsg-2
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Thu, 24 Oct 2024 08:37:37 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 autoconf (= 2.72-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.22.5-2),
 autotools-dev (= 20220109.1),
 base-files (= 13.5),
 base-passwd (= 3.6.5),
 bash (= 5.2.32-1+b2),
 binutils (= 2.43.1-5),
 binutils-aarch64-linux-gnu (= 2.43.1-5),
 binutils-common (= 2.43.1-5),
 bsdextrautils (= 2.40.2-9),
 bsdutils (= 1:2.40.2-9),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6),
 coreutils (= 9.5-1),
 cpp (= 4:14.2.0-1),
 cpp-14 (= 14.2.0-7),
 cpp-14-aarch64-linux-gnu (= 14.2.0-7),
 cpp-aarch64-linux-gnu (= 4:14.2.0-1),
 cython3 (= 3.0.11+dfsg-1),
 dash (= 0.5.12-9),
 debconf (= 1.5.87),
 debhelper (= 13.20),
 debianutils (= 5.20),
 dh-autoreconf (= 20),
 dh-python (= 6.20240824),
 dh-strip-nondeterminism (= 1.14.0-1),
 diffutils (= 1:3.10-1),
 dpkg (= 1.22.11),
 dpkg-dev (= 1.22.11),
 dwz (= 0.15-1+b1),
 file (= 1:5.45-3),
 findutils (= 4.10.0-3),
 g++ (= 4:14.2.0-1),
 g++-14 (= 14.2.0-7),
 g++-14-aarch64-linux-gnu (= 14.2.0-7),
 g++-aarch64-linux-gnu (= 4:14.2.0-1),
 gcc (= 4:14.2.0-1),
 gcc-14 (= 14.2.0-7),
 gcc-14-aarch64-linux-gnu (= 14.2.0-7),
 gcc-14-base (= 14.2.0-7),
 gcc-aarch64-linux-gnu (= 4:14.2.0-1),
 gettext (= 0.22.5-2),
 gettext-base (= 0.22.5-2),
 grep (= 3.11-4),
 groff-base (= 1.23.0-5),
 gzip (= 1.12-1.1),
 hostname (= 3.25),
 init-system-helpers (= 1.67),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.2-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 14.2.0-7),
 libatomic1 (= 14.2.0-7),
 libattr1 (= 1:2.5.2-2),
 libaudit-common (= 1:4.0.1-1),
 libaudit1 (= 1:4.0.1-1),
 libbinutils (= 2.43.1-5),
 libblkid1 (= 2.40.2-9),
 libbrotli1 (= 1.1.0-2+b4),
 libbz2-1.0 (= 1.0.8-6),
 libc-bin (= 2.40-3),
 libc-dev-bin (= 2.40-3),
 libc6 (= 2.40-3),
 libc6-dev (= 2.40-3),
 libcap-ng0 (= 0.8.5-3),
 libcap2 (= 1:2.66-5),
 libcc1-0 (= 14.2.0-7),
 libcom-err2 (= 1.47.1-1),
 libcrypt-dev (= 1:4.4.36-5),
 libcrypt1 (= 1:4.4.36-5),
 libctf-nobfd0 (= 2.43.1-5),
 libctf0 (= 2.43.1-5),
 libcurl3t64-gnutls (= 8.10.1-2),
 libdb5.3t64 (= 5.3.28+dfsg2-9),
 libdebconfclient0 (= 0.272),
 libdebhelper-perl (= 13.20),
 libdeflate0 (= 1.22-1),
 libdpkg-perl (= 1.22.11),
 libelf1t64 (= 0.192-4),
 libexpat1 (= 2.6.3-1),
 libexpat1-dev (= 2.6.3-1),
 libffi8 (= 3.4.6-1),
 libfile-stripnondeterminism-perl (= 1.14.0-1),
 libgcc-14-dev (= 14.2.0-7),
 libgcc-s1 (= 14.2.0-7),
 libgdbm-compat4t64 (= 1.24-2),
 libgdbm6t64 (= 1.24-2),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgnutls30t64 (= 3.8.6-2),
 libgomp1 (= 14.2.0-7),
 libgprofng0 (= 2.43.1-5),
 libgssapi-krb5-2 (= 1.21.3-3),
 libhogweed6t64 (= 3.10-1),
 libhts3t64 (= 1.20+ds-1),
 libhtscodecs2 (= 1.6.1-1),
 libhwasan0 (= 14.2.0-7),
 libicu72 (= 72.1-5),
 libidn2-0 (= 2.3.7-2),
 libisl23 (= 0.27-1),
 libitm1 (= 14.2.0-7),
 libjansson4 (= 2.14-2+b2),
 libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
 libjs-sphinxdoc (= 7.4.7-3),
 libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
 libk5crypto3 (= 1.21.3-3),
 libkeyutils1 (= 1.6.3-3.1),
 libkrb5-3 (= 1.21.3-3),
 libkrb5support0 (= 1.21.3-3),
 libldap-2.5-0 (= 2.5.18+dfsg-3+b1),
 liblsan0 (= 14.2.0-7),
 liblzma5 (= 5.6.2-2),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmd0 (= 1.1.0-2),
 libmount1 (= 2.40.2-9),
 libmpc3 (= 1.3.1-1+b2),
 libmpfr6 (= 4.2.1-1+b1),
 libncursesw6 (= 6.5-2),
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 libnghttp2-14 (= 1.63.0-1),
 libnghttp3-9 (= 1.4.0-1),
 libngtcp2-16 (= 1.6.0-1),
 libngtcp2-crypto-gnutls8 (= 1.6.0-1),
 libnsl2 (= 1.3.0-3+b2),
 libp11-kit0 (= 0.25.5-2),
 libpam-modules (= 1.5.3-7),
 libpam-modules-bin (= 1.5.3-7),
 libpam-runtime (= 1.5.3-7),
 libpam0g (= 1.5.3-7),
 libpcre2-8-0 (= 10.42-4+b1),
 libperl5.40 (= 5.40.0-6),
 libpipeline1 (= 1.5.8-1),
 libpsl5t64 (= 0.21.2-1.1),
 libpython3-all-dev (= 3.12.6-1+debusine1),
 libpython3-dev (= 3.12.6-1+debusine1),
 libpython3-stdlib (= 3.12.6-1+debusine1),
 libpython3.12-dev (= 3.12.7-1),
 libpython3.12-minimal (= 3.12.7-1),
 libpython3.12-stdlib (= 3.12.7-1),
 libpython3.12t64 (= 3.12.7-1),
 libpython3.13 (= 3.13.0-1),
 libpython3.13-dev (= 3.13.0-1),
 libpython3.13-minimal (= 3.13.0-1),
 libpython3.13-stdlib (= 3.13.0-1),
 libreadline8t64 (= 8.2-5),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4),
 libsasl2-2 (= 2.1.28+dfsg1-8),
 libsasl2-modules-db (= 2.1.28+dfsg1-8),
 libseccomp2 (= 2.5.5-1+b1),
 libselinux1 (= 3.7-3),
 libsframe1 (= 2.43.1-5),
 libsmartcols1 (= 2.40.2-9),
 libsqlite3-0 (= 3.46.1-1),
 libssh2-1t64 (= 1.11.1-1),
 libssl3t64 (= 3.3.2-1),
 libstdc++-14-dev (= 14.2.0-7),
 libstdc++6 (= 14.2.0-7),
 libsystemd0 (= 256.7-2),
 libtasn1-6 (= 4.19.0-3+b2),
 libtinfo6 (= 6.5-2),
 libtirpc-common (= 1.3.4+ds-1.3),
 libtirpc3t64 (= 1.3.4+ds-1.3),
 libtool (= 2.4.7-7),
 libtsan2 (= 14.2.0-7),
 libubsan1 (= 14.2.0-7),
 libuchardet0 (= 0.0.8-1+b1),
 libudev1 (= 256.7-2),
 libunistring5 (= 1.2-1),
 libuuid1 (= 2.40.2-9),
 libxml2 (= 2.12.7+dfsg+really2.9.14-0.1),
 libzstd1 (= 1.5.6+dfsg-1),
 linux-libc-dev (= 6.11.4-1),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.13.0-1),
 mawk (= 1.3.4.20240905-1),
 media-types (= 10.1.0),
 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2),
 netbase (= 6.4),
 openssl-provider-legacy (= 3.3.2-1),
 patch (= 2.7.6-7),
 perl (= 5.40.0-6),
 perl-base (= 5.40.0-6),
 perl-modules-5.40 (= 5.40.0-6),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.12.6-1+debusine1),
 python3-all (= 3.12.6-1+debusine1),
 python3-all-dev (= 3.12.6-1+debusine1),
 python3-autocommand (= 2.2.2-3),
 python3-colorama (= 0.4.6-4),
 python3-dev (= 3.12.6-1+debusine1),
 python3-inflect (= 7.3.1-2),
 python3-iniconfig (= 1.1.1-2),
 python3-jaraco.context (= 6.0.0-1),
 python3-jaraco.functools (= 4.1.0-1),
 python3-jinja2 (= 3.1.3-1),
 python3-loguru (= 0.7.2-3),
 python3-markupsafe (= 2.1.5-1+b1),
 python3-minimal (= 3.12.6-1+debusine1),
 python3-more-itertools (= 10.5.0-1),
 python3-packaging (= 24.1-1),
 python3-pkg-resources (= 74.1.2-2),
 python3-pluggy (= 1.5.0-1),
 python3-pokrok (= 0.2.0-5),
 python3-pysam (= 0.22.1+ds-2+b1),
 python3-pytest (= 8.3.3-1),
 python3-setuptools (= 74.1.2-2),
 python3-setuptools-scm (= 8.1.0-1),
 python3-typeguard (= 4.3.0-1),
 python3-typing-extensions (= 4.12.2-2),
 python3-wheel (= 0.44.0-2),
 python3-xphyle (= 4.4.4-5),
 python3-zipp (= 3.20.2-1),
 python3.12 (= 3.12.7-1),
 python3.12-dev (= 3.12.7-1),
 python3.12-minimal (= 3.12.7-1),
 python3.13 (= 3.13.0-1),
 python3.13-dev (= 3.13.0-1),
 python3.13-minimal (= 3.13.0-1),
 readline-common (= 8.2-5),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.24),
 sysvinit-utils (= 3.11-1),
 tar (= 1.35+dfsg-3),
 tzdata (= 2024b-3),
 util-linux (= 2.40.2-9),
 xz-utils (= 5.6.2-2),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
 DEB_BUILD_OPTIONS="parallel=8"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 SOURCE_DATE_EPOCH="1722416385"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


atropos-dbgsym_1.1.32+dfsg-2_arm64.deb
--------------------------------------

 new Debian package, version 2.0.
 size 1232756 bytes: control archive=868 bytes.
     588 bytes,    12 lines      control
     721 bytes,     7 lines      md5sums
 Package: atropos-dbgsym
 Source: atropos
 Version: 1.1.32+dfsg-2
 Auto-Built-Package: debug-symbols
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1348
 Depends: atropos (= 1.1.32+dfsg-2)
 Section: debug
 Priority: optional
 Description: debug symbols for atropos
 Build-Ids: b33186f94862bb3120b6d84ab5b1d9d6c858ca00 bb6bce8c3f5f593f9428bbe0e8476d8d67b21f59 c4445987841517f61a487fc47625e58e6d784421 d2a0d175dad9b7ccd55c02db054fc80a6bc33980 dd57e2afee49fb21d6a91c16541195d21d096e7d e8d1f91073959a3bd5fc0deb9274b257bf13be94

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drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/
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drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/debug/
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-rw-r--r-- root/root    321144 2024-07-31 08:59 ./usr/lib/debug/.build-id/d2/a0d175dad9b7ccd55c02db054fc80a6bc33980.debug
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/debug/.build-id/dd/
-rw-r--r-- root/root    263672 2024-07-31 08:59 ./usr/lib/debug/.build-id/dd/57e2afee49fb21d6a91c16541195d21d096e7d.debug
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/debug/.build-id/e8/
-rw-r--r-- root/root     71080 2024-07-31 08:59 ./usr/lib/debug/.build-id/e8/d1f91073959a3bd5fc0deb9274b257bf13be94.debug
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root     28224 2024-07-31 08:59 ./usr/lib/debug/.dwz/aarch64-linux-gnu/atropos.debug
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/share/
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/share/doc/
lrwxrwxrwx root/root         0 2024-07-31 08:59 ./usr/share/doc/atropos-dbgsym -> atropos


atropos_1.1.32+dfsg-2_arm64.deb
-------------------------------

 new Debian package, version 2.0.
 size 234752 bytes: control archive=3048 bytes.
    2186 bytes,    42 lines      control
    4732 bytes,    50 lines      md5sums
     261 bytes,    12 lines   *  postinst             #!/bin/sh
     374 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: atropos
 Version: 1.1.32+dfsg-2
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1332
 Depends: libc6 (>= 2.17), python3 (<< 3.14), python3 (>= 3.12~), python3:any, python3-pysam
 Recommends: python3-jinja2
 Section: science
 Priority: optional
 Homepage: https://github.com/jdidion/atropos
 Description: NGS read trimming tool that is specific, sensitive, and speedy
  Atropos is tool for specific, sensitive, and speedy trimming of NGS
  reads. It is a fork of the venerable Cutadapt read trimmer, with the
  primary improvements being:
  .
    1. Multi-threading support, including an extremely fast "parallel
       write" mode.
    2. Implementation of a new insert alignment-based trimming algorithm
       for paired-end reads that is substantially more sensitive and
       specific than the original Cutadapt adapter alignment-based
       algorithm. This algorithm can also correct mismatches between the
       overlapping portions of the reads.
    3. Options for trimming specific types of data (miRNA, bisulfite-seq).
    4. A new command ('detect') that will detect adapter sequences and
       other potential contaminants.
    5. A new command ('error') that will estimate the sequencing error
       rate, which helps to select the appropriate adapter- and quality-
       trimming parameter values.
    6. A new command ('qc') that generates read statistics similar to
       FastQC. The trim command can also compute read statistics both
       before and after trimming (using the '--stats' option).
    7. Improved summary reports, including support for serialization
       formats (JSON, YAML, pickle), support for user-defined templates
       (via the optional Jinja2 dependency), and integration with MultiQC.
    8. The ability to merge overlapping reads (this is experimental and
       the functionality is limited).
    9. The ability to write the summary report and log messages to
       separate files.
   10. The ability to read SAM/BAM files and read/write interleaved
       FASTQ files.
   11. Direct trimming of reads from an SRA accession.
   12. A progress bar, and other minor usability enhancements.

drwxr-xr-x root/root         0 2024-07-31 08:59 ./
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/bin/
-rwxr-xr-x root/root       517 2024-07-31 08:59 ./usr/bin/atropos
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/
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drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos-1.1.32.egg-info/
-rw-r--r-- root/root     12875 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos-1.1.32.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos-1.1.32.egg-info/dependency_links.txt
-rw-r--r-- root/root       111 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos-1.1.32.egg-info/requires.txt
-rw-r--r-- root/root        14 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos-1.1.32.egg-info/top_level.txt
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/lib/python3/dist-packages/atropos/
-rw-r--r-- root/root       911 2023-12-07 17:58 ./usr/lib/python3/dist-packages/atropos/__init__.py
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drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/share/
drwxr-xr-x root/root         0 2024-07-31 08:59 ./usr/share/doc/
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lintian
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Setup apt archive
-----------------

Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
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Reading package lists...
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Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-lintian-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
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(Reading database ... 26702 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
W: atropos changes: distribution-and-changes-mismatch sid unstable

I: Lintian run was successful.

+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: binary
Build-Space: 28072
Build-Time: 108
Distribution: sid
Host Architecture: arm64
Install-Time: 41
Job: /tmp/debusine-fetch-exec-upload-kz2zgyew/atropos_1.1.32+dfsg-2.dsc
Lintian: warn
Machine Architecture: arm64
Package: atropos
Package-Time: 186
Source-Version: 1.1.32+dfsg-2
Space: 28072
Status: successful
Version: 1.1.32+dfsg-2
--------------------------------------------------------------------------------
Finished at 2024-10-24T08:37:37Z
Build needed 00:03:06, 28072k disk space

Relations

Relation Direction Type Name
relates-to Source package atropos_1.1.32+dfsg-2
relates-to Binary package libpython3-all-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-all-dev_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-dev_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-stdlib_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-dev_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-venv_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all_3.12.6-1+debusine1_arm64
relates-to Binary package python3-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package python3-dev_3.12.6-1+debusine1_arm64
relates-to Binary package python3-full_3.12.6-1+debusine1_arm64
relates-to Binary package python3-minimal_3.12.6-1+debusine1_arm64
relates-to Binary package python3-nopie_3.12.6-1+debusine1_arm64
relates-to Binary package python3-venv_3.12.6-1+debusine1_arm64
relates-to Binary package python3_3.12.6-1+debusine1_arm64
relates-to Binary package 2to3_3.12.6-1+debusine1_all
relates-to Binary package idle_3.12.6-1+debusine1_all
relates-to Binary package python3-doc_3.12.6-1+debusine1_all
relates-to Binary package python3-examples_3.12.6-1+debusine1_all
relates-to Binary package atropos-dbgsym_1.1.32+dfsg-2_arm64
relates-to Binary package atropos_1.1.32+dfsg-2_arm64
relates-to Binary packages atropos_1.1.32+dfsg-2

build log System… build a package… - 1 month ago 1 day, 5 hours
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