Artifact tiddit_3.6.1+dfsg-1+bd1_arm64-2024-10-24T08:56:12Z

Metadata
bd_uninstallable: null
filename: tiddit_3.6.1+dfsg-1+bd1_arm64-2024-10-24T08:56:12Z.build
source: tiddit
version: 3.6.1+dfsg-1

File

tiddit_3.6.1+dfsg-1+bd1_arm64-2024-10-24T08:56:12Z.build
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sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-07.freexian.com

+==============================================================================+
| tiddit 3.6.1+dfsg-1+bd1 (arm64)              Thu, 24 Oct 2024 08:56:12 +0000 |
+==============================================================================+

Package: tiddit
Version: 3.6.1+dfsg-1+bd1
Source Version: 3.6.1+dfsg-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: any

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/872923/system.tar.xz to /tmp/tmp.sbuild.KNJkP71oxF...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/libpython3-all-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/libpython3-all-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/libpython3-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
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Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/libpython3-stdlib_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-all-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
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Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-full_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-minimal_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-nopie_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-venv_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/2to3_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/idle_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-doc_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-examples_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-numpy-dbgsym_1.26.4+ds-11+bootstrap1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-numpy_1.26.4+ds-11+bootstrap1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/cython3-dbgsym_3.0.11+dfsg-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/cython3_3.0.11+dfsg-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-pysam-dbgsym_0.22.1+ds-2+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-joqpmrtn/python3-pysam_0.22.1+ds-2+debusine1_arm64.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/tiddit-mGiGdM/resolver-W7IilE' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ InRelease
Ign:1 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ InRelease
Get:2 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ Release [609 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ Release [609 B]
Get:4 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ Release.gpg
Ign:4 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ Release.gpg
Get:5 file:/build/tiddit-mGiGdM/resolver-dgpbrd/apt_archive ./ Packages [29.7 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9916 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4910 kB]
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Reading package lists...
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The following packages will be upgraded:
  apt base-passwd coreutils libapt-pkg6.0t64 libhtml-form-perl libkeyutils1
  liblz1 libnet-ssleay-perl sysvinit-utils
9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 5601 kB of archives.
After this operation, 142 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian sid/main arm64 coreutils arm64 9.5-1 [2858 kB]
Get:2 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.10 [922 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 base-passwd arm64 3.6.5 [52.8 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.10 [1332 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 sysvinit-utils arm64 3.11-1 [33.0 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 libhtml-form-perl all 6.12-1 [32.3 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3.1 [9256 B]
Get:8 http://deb.debian.org/debian sid/main arm64 liblz1 arm64 1.15~pre2-1 [38.1 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libnet-ssleay-perl arm64 1.94-2 [323 kB]
debconf: delaying package configuration, since apt-utils is not installed
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+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/tmp/debusine-fetch-exec-upload-joqpmrtn/tiddit_3.6.1+dfsg-1.dsc exists in /tmp/debusine-fetch-exec-upload-joqpmrtn; copying to chroot
I: NOTICE: Log filtering will replace 'build/tiddit-mGiGdM/tiddit-3.6.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tiddit-mGiGdM' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-numpy, python3-pysam, build-essential, fakeroot, dumb-init
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-numpy, python3-pysam, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [732 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [757 B]
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Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ InRelease
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Get:2 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ Release [609 B]
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Get:3 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
  g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
  libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
  libelf1t64 libexpat1 libexpat1-dev libfakeroot
  libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libhts3t64
  libhtscodecs2 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
  libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6 libncursesw6 libnsl2
  libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev
  libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13
  libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib
  libstdc++-14-dev libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  linux-libc-dev m4 media-types po-debconf python3 python3-all python3-all-dev
  python3-autocommand python3-dev python3-inflect python3-jaraco.context
  python3-jaraco.functools python3-minimal python3-more-itertools
  python3-numpy python3-pkg-resources python3-pysam python3-setuptools
  python3-typeguard python3-typing-extensions python3-zipp python3.12
  python3.12-dev python3.12-minimal python3.13 python3.13-dev
  python3.13-minimal rpcsvc-proto zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
  cpp-14-doc cython-doc dh-make flit python3-build python3-installer
  python3-wheel gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gdb-aarch64-linux-gnu libc-devtools glibc-doc libstdc++-14-doc libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-doc
  python3-tk python3-venv gfortran python-numpy-doc python3-pytest
  python-setuptools-doc python3.12-venv python3.12-doc binfmt-support
  python3.13-venv python3.13-doc
Recommended packages:
  manpages manpages-dev libarchive-cpio-perl javascript-common libgpm2
  libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++
  g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
  libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
  libelf1t64 libexpat1 libexpat1-dev libfakeroot
  libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libhts3t64
  libhtscodecs2 libhwasan0 libisl23 libitm1 libjs-jquery libjs-sphinxdoc
  libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6 libncursesw6 libnsl2
  libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev
  libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13
  libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib
  libstdc++-14-dev libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  linux-libc-dev m4 media-types po-debconf python3 python3-all python3-all-dev
  python3-autocommand python3-dev python3-inflect python3-jaraco.context
  python3-jaraco.functools python3-minimal python3-more-itertools
  python3-numpy python3-pkg-resources python3-pysam python3-setuptools
  python3-typeguard python3-typing-extensions python3-zipp python3.12
  python3.12-dev python3.12-minimal python3.13 python3.13-dev
  python3.13-minimal rpcsvc-proto sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded.
Need to get 92.1 MB/103 MB of archives.
After this operation, 462 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B]
Get:2 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-minimal 3.12.6-1+debusine1 [26.8 kB]
Get:3 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ libpython3-stdlib 3.12.6-1+debusine1 [9732 B]
Get:4 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3 3.12.6-1+debusine1 [27.8 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.7-1 [807 kB]
Get:6 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ cython3 3.0.11+dfsg-1+debusine1 [2724 kB]
Get:7 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ libpython3-dev 3.12.6-1+debusine1 [9992 B]
Get:8 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ libpython3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:9 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-all 3.12.6-1+debusine1 [1056 B]
Get:10 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-dev 3.12.6-1+debusine1 [26.1 kB]
Get:11 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:12 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.3-1 [90.2 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.7-1 [1941 kB]
Get:14 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-numpy 1:1.26.4+ds-11+bootstrap1 [3815 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2 [124 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3 [78.4 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b2 [37.7 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.7-1 [1901 kB]
Get:21 file:/<<BUILDDIR>>/resolver-dgpbrd/apt_archive ./ python3-pysam 0.22.1+ds-2+debusine1 [3880 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.7-1 [671 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 libpython3.13-minimal arm64 3.13.0-1 [849 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 python3.13-minimal arm64 3.13.0-1 [1835 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.4-1 [2440 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-7 [9164 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-7 [1280 B]
Get:40 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:41 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:42 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-7 [42.2 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-7 [24.2 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-7 [2578 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-7 [1162 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-7 [2386 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-7 [1040 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-7 [1442 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-7 [2365 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-7 [17.7 MB]
Get:51 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-7 [517 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:53 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:54 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-7 [2265 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-7 [10.1 MB]
Get:56 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-7 [20.0 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:58 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:59 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:60 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:65 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:75 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 74.1.2-2 [736 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20240824 [109 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-7 [361 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libhtscodecs2 arm64 1.6.1-1 [74.6 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libhts3t64 arm64 1.20+ds-1 [416 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
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+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-7 gcc-14_14.2.0-7 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 linux-libc-dev_6.11.4-1
Package versions: appstream_1.0.3-1 apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1 cpp_4:14.2.0-1 cpp-14_14.2.0-7 cpp-14-aarch64-linux-gnu_14.2.0-7 cpp-aarch64-linux-gnu_4:14.2.0-1 cython3_3.0.11+dfsg-1+debusine1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20240824 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-7 g++-14-aarch64-linux-gnu_14.2.0-7 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-7 gcc-14-aarch64-linux-gnu_14.2.0-7 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libyaml-libyaml-perl_0.902.0+ds-2+b1 libzstd1_1.5.6+dfsg-1 lintian_2.119.0 linux-libc-dev_6.11.4-1 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 logsave_1.47.1-1 lzop_1.04-2 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 media-types_10.1.0 mount_2.40.2-9 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openssl_3.3.2-1 openssl-provider-legacy_3.3.2-1 passwd_1:4.16.0-4 patch_2.7.6-7 patchutils_0.4.2-1 perl_5.40.0-6 perl-base_5.40.0-6 perl-modules-5.40_5.40.0-6 perl-openssl-defaults_7+b2 plzip_1.11-2 po-debconf_1.0.21+nmu1 python3_3.12.6-1+debusine1 python3-all_3.12.6-1+debusine1 python3-all-dev_3.12.6-1+debusine1 python3-autocommand_2.2.2-3 python3-dev_3.12.6-1+debusine1 python3-inflect_7.3.1-2 python3-jaraco.context_6.0.0-1 python3-jaraco.functools_4.1.0-1 python3-minimal_3.12.6-1+debusine1 python3-more-itertools_10.5.0-1 python3-numpy_1:1.26.4+ds-11+bootstrap1 python3-pkg-resources_74.1.2-2 python3-pysam_0.22.1+ds-2+debusine1 python3-setuptools_74.1.2-2 python3-typeguard_4.3.0-1 python3-typing-extensions_4.12.2-2 python3-zipp_3.20.2-1 python3.12_3.12.7-1 python3.12-dev_3.12.7-1 python3.12-minimal_3.12.7-1 python3.13_3.13.0-1 python3.13-dev_3.13.0-1 python3.13-minimal_3.13.0-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4 tar_1.35+dfsg-3 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28 util-linux_2.40.2-9 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

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Hash: SHA512

Format: 3.0 (quilt)
Source: tiddit
Binary: tiddit
Architecture: any
Version: 3.6.1+dfsg-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/SciLifeLab/TIDDIT
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/tiddit
Vcs-Git: https://salsa.debian.org/med-team/tiddit.git
Testsuite: autopkgtest
Testsuite-Triggers: samtools
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, cython3, python3-all-dev, python3-setuptools, python3-numpy, python3-pysam
Package-List:
 tiddit deb science optional arch=any
Checksums-Sha1:
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Files:
 6f59a022dc62485c94b35623bc1f65c4 19516 tiddit_3.6.1+dfsg.orig.tar.xz
 56f6955529788faccd685e01efe01906 1731440 tiddit_3.6.1+dfsg-1.debian.tar.xz

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gpgv: Signature made Wed Nov  8 20:32:59 2023 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./tiddit_3.6.1+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting tiddit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking tiddit_3.6.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking tiddit_3.6.1+dfsg-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 3.6.1+dfsg-1+bd1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -mDebusine Rebuild <debusine@example.net> -B -rfakeroot
dpkg-buildpackage: info: source package tiddit
dpkg-buildpackage: info: source version 3.6.1+dfsg-1+bd1
dpkg-buildpackage: info: source distribution sid
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py clean 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_cluster.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_contig_analysis.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_coverage.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_coverage_analysis.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_signal.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_variant.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
Compiling tiddit/tiddit_signal.pyx because it changed.
Compiling tiddit/tiddit_coverage.pyx because it changed.
Compiling tiddit/tiddit_cluster.pyx because it changed.
Compiling tiddit/tiddit_coverage_analysis.pyx because it changed.
Compiling tiddit/tiddit_variant.pyx because it changed.
Compiling tiddit/tiddit_contig_analysis.pyx because it changed.
[1/6] Cythonizing tiddit/tiddit_cluster.pyx
[2/6] Cythonizing tiddit/tiddit_contig_analysis.pyx
[3/6] Cythonizing tiddit/tiddit_coverage.pyx
[4/6] Cythonizing tiddit/tiddit_coverage_analysis.pyx
[5/6] Cythonizing tiddit/tiddit_signal.pyx
[6/6] Cythonizing tiddit/tiddit_variant.pyx
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
I: pybuild base:311: python3.12 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean
rm -f tiddit/*.c
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules binary-arch
dh binary-arch --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_cluster.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_contig_analysis.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_coverage.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_coverage_analysis.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_signal.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/tiddit/tiddit_variant.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
Compiling tiddit/tiddit_signal.pyx because it changed.
Compiling tiddit/tiddit_coverage.pyx because it changed.
Compiling tiddit/tiddit_cluster.pyx because it changed.
Compiling tiddit/tiddit_coverage_analysis.pyx because it changed.
Compiling tiddit/tiddit_variant.pyx because it changed.
Compiling tiddit/tiddit_contig_analysis.pyx because it changed.
[1/6] Cythonizing tiddit/tiddit_cluster.pyx
[2/6] Cythonizing tiddit/tiddit_contig_analysis.pyx
[3/6] Cythonizing tiddit/tiddit_coverage.pyx
[4/6] Cythonizing tiddit/tiddit_coverage_analysis.pyx
[5/6] Cythonizing tiddit/tiddit_signal.pyx
[6/6] Cythonizing tiddit/tiddit_variant.pyx
running config
I: pybuild base:311: python3.12 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
copying tiddit/DBSCAN.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
copying tiddit/tiddit_vcf_header.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
copying tiddit/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
copying tiddit/tiddit_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
copying tiddit/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit
running build_ext
building 'tiddit.tiddit_signal' extension
creating build
creating build/temp.linux-aarch64-cpython-313
creating build/temp.linux-aarch64-cpython-313/tiddit
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_signal.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_signal.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_signal.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_signal.cpython-313-aarch64-linux-gnu.so
building 'tiddit.tiddit_coverage' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_coverage.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_coverage.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from tiddit/tiddit_coverage.c:1240:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_coverage.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_coverage.cpython-313-aarch64-linux-gnu.so
building 'tiddit.tiddit_cluster' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_cluster.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_cluster.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_cluster.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_cluster.cpython-313-aarch64-linux-gnu.so
building 'tiddit.tiddit_coverage_analysis' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_coverage_analysis.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_coverage_analysis.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from tiddit/tiddit_coverage_analysis.c:1240:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_coverage_analysis.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_coverage_analysis.cpython-313-aarch64-linux-gnu.so
building 'tiddit.tiddit_variant' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_variant.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_variant.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_variant.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_variant.cpython-313-aarch64-linux-gnu.so
building 'tiddit.tiddit_contig_analysis' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c tiddit/tiddit_contig_analysis.c -o build/temp.linux-aarch64-cpython-313/tiddit/tiddit_contig_analysis.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/tiddit/tiddit_contig_analysis.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_contig_analysis.cpython-313-aarch64-linux-gnu.so
I: pybuild base:311: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
copying tiddit/DBSCAN.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
copying tiddit/tiddit_vcf_header.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
copying tiddit/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
copying tiddit/tiddit_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
copying tiddit/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit
running build_ext
building 'tiddit.tiddit_signal' extension
creating build/temp.linux-aarch64-cpython-312
creating build/temp.linux-aarch64-cpython-312/tiddit
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_signal.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_signal.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_signal.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_signal.cpython-312-aarch64-linux-gnu.so
building 'tiddit.tiddit_coverage' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_coverage.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_coverage.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from tiddit/tiddit_coverage.c:1240:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_coverage.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_coverage.cpython-312-aarch64-linux-gnu.so
building 'tiddit.tiddit_cluster' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_cluster.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_cluster.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_cluster.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_cluster.cpython-312-aarch64-linux-gnu.so
building 'tiddit.tiddit_coverage_analysis' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_coverage_analysis.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_coverage_analysis.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from tiddit/tiddit_coverage_analysis.c:1240:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_coverage_analysis.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_coverage_analysis.cpython-312-aarch64-linux-gnu.so
building 'tiddit.tiddit_variant' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_variant.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_variant.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_variant.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_variant.cpython-312-aarch64-linux-gnu.so
building 'tiddit.tiddit_contig_analysis' extension
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c tiddit/tiddit_contig_analysis.c -o build/temp.linux-aarch64-cpython-312/tiddit/tiddit_contig_analysis.o
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/tiddit/tiddit_contig_analysis.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_contig_analysis.cpython-312-aarch64-linux-gnu.so
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build; python3.13 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

NO TESTS RAN
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build; python3.12 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

NO TESTS RAN
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install --destdir=debian/tiddit/ -a -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /<<PKGBUILDDIR>>/debian/tiddit 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/tiddit/usr
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/DBSCAN.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_vcf_header.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/__init__.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_cluster.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_stats.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_signal.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_coverage_analysis.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_contig_analysis.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/__main__.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_coverage.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tiddit/build/tiddit/tiddit_variant.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/DBSCAN.py to DBSCAN.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/tiddit_vcf_header.py to tiddit_vcf_header.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/tiddit_stats.py to tiddit_stats.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit/__main__.py to __main__.cpython-313.pyc
running install_egg_info
running egg_info
creating tiddit.egg-info
writing tiddit.egg-info/PKG-INFO
writing dependency_links to tiddit.egg-info/dependency_links.txt
writing entry points to tiddit.egg-info/entry_points.txt
writing requirements to tiddit.egg-info/requires.txt
writing top-level names to tiddit.egg-info/top_level.txt
writing manifest file 'tiddit.egg-info/SOURCES.txt'
reading manifest file 'tiddit.egg-info/SOURCES.txt'
adding license file 'COPYING'
adding license file 'AUTHORS'
writing manifest file 'tiddit.egg-info/SOURCES.txt'
Copying tiddit.egg-info to /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.13/dist-packages/tiddit-3.6.1.egg-info
Skipping SOURCES.txt
running install_scripts
Installing tiddit script to /<<PKGBUILDDIR>>/debian/tiddit/usr/bin
I: pybuild base:311: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/tiddit 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/DBSCAN.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_signal.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_vcf_header.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/__init__.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_variant.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_contig_analysis.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_coverage.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_stats.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
creating /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_coverage_analysis.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/__main__.py -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_tiddit/build/tiddit/tiddit_cluster.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/DBSCAN.py to DBSCAN.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/tiddit_vcf_header.py to tiddit_vcf_header.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/tiddit_stats.py to tiddit_stats.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit/__main__.py to __main__.cpython-312.pyc
running install_egg_info
running egg_info
writing tiddit.egg-info/PKG-INFO
writing dependency_links to tiddit.egg-info/dependency_links.txt
writing entry points to tiddit.egg-info/entry_points.txt
writing requirements to tiddit.egg-info/requires.txt
writing top-level names to tiddit.egg-info/top_level.txt
reading manifest file 'tiddit.egg-info/SOURCES.txt'
adding license file 'COPYING'
adding license file 'AUTHORS'
writing manifest file 'tiddit.egg-info/SOURCES.txt'
Copying tiddit.egg-info to /<<PKGBUILDDIR>>/debian/tiddit/usr/lib/python3.12/dist-packages/tiddit-3.6.1.egg-info
Skipping SOURCES.txt
running install_scripts
Installing tiddit script to /<<PKGBUILDDIR>>/debian/tiddit/usr/bin
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installman --language=C
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3 --shebang=/usr/bin/python3
I: dh_python3 tools:113: replacing shebang in debian/tiddit/usr/bin/tiddit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'tiddit' in '../tiddit_3.6.1+dfsg-1+bd1_arm64.deb'.
dpkg-deb: building package 'tiddit-dbgsym' in '../tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb'.
 dpkg-genbuildinfo --build=any -O../tiddit_3.6.1+dfsg-1+bd1_arm64.buildinfo
 dpkg-genchanges --build=any -mDebusine Rebuild <debusine@example.net> -O../tiddit_3.6.1+dfsg-1+bd1_arm64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-10-24T09:00:13Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


tiddit_3.6.1+dfsg-1+bd1_arm64.changes:
--------------------------------------

Format: 1.8
Date: Thu, 24 Oct 2024 08:57:31 +0000
Source: tiddit (3.6.1+dfsg-1)
Binary: tiddit tiddit-dbgsym
Binary-Only: yes
Architecture: arm64
Version: 3.6.1+dfsg-1+bd1
Distribution: sid
Urgency: low
Maintainer: Debusine Rebuild <debusine@example.net>
Changed-By: Debusine Rebuild <debusine@example.net>
Description:
 tiddit     - structural variant calling
Changes:
 tiddit (3.6.1+dfsg-1+bd1) sid; urgency=low, binary-only=yes
 .
   * Append +bd1 to version number; no source changes
   * Binary-only non-maintainer upload for arm64; no source changes.
   * Rebuild for python3.13
Checksums-Sha1:
 b23e2fa64996f08168ba06ee86ed06f3e2b24477 3580736 tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 1891c1dcfc5f7bc98f5cd3645630d13b277cbe9b 7785 tiddit_3.6.1+dfsg-1+bd1_arm64.buildinfo
 453c3c18eb7ce2e2899844f9780a1288fa15dc20 354344 tiddit_3.6.1+dfsg-1+bd1_arm64.deb
Checksums-Sha256:
 41bc802a7ea53fe8fa7d512ba0c89d195bc0143303fda37e06024903e5fbd6cd 3580736 tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 2510009c931d43b113880a83ffa84ddd773f5d76924ba6e2d3a7d81c253eb8c7 7785 tiddit_3.6.1+dfsg-1+bd1_arm64.buildinfo
 db7d042ac93e3c1dd83d6fa48f516c57c546893776087cf59d10ef5ffa7017ed 354344 tiddit_3.6.1+dfsg-1+bd1_arm64.deb
Files:
 0fae51930922abcd6ac5c3d1f3bd9165 3580736 debug optional tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 99b5e2ec686539e956e03f0da115516a 7785 science optional tiddit_3.6.1+dfsg-1+bd1_arm64.buildinfo
 ec3e5e82a38c624444b018f5945a0026 354344 science optional tiddit_3.6.1+dfsg-1+bd1_arm64.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: tiddit (3.6.1+dfsg-1)
Binary: tiddit tiddit-dbgsym
Architecture: arm64
Version: 3.6.1+dfsg-1+bd1
Binary-Only-Changes:
 tiddit (3.6.1+dfsg-1+bd1) sid; urgency=low, binary-only=yes
 .
   * Append +bd1 to version number; no source changes
   * Binary-only non-maintainer upload for arm64; no source changes.
   * Rebuild for python3.13
 .
  -- Debusine Rebuild <debusine@example.net>  Thu, 24 Oct 2024 08:57:31 +0000
Checksums-Md5:
 0fae51930922abcd6ac5c3d1f3bd9165 3580736 tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 ec3e5e82a38c624444b018f5945a0026 354344 tiddit_3.6.1+dfsg-1+bd1_arm64.deb
Checksums-Sha1:
 b23e2fa64996f08168ba06ee86ed06f3e2b24477 3580736 tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 453c3c18eb7ce2e2899844f9780a1288fa15dc20 354344 tiddit_3.6.1+dfsg-1+bd1_arm64.deb
Checksums-Sha256:
 41bc802a7ea53fe8fa7d512ba0c89d195bc0143303fda37e06024903e5fbd6cd 3580736 tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
 db7d042ac93e3c1dd83d6fa48f516c57c546893776087cf59d10ef5ffa7017ed 354344 tiddit_3.6.1+dfsg-1+bd1_arm64.deb
Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Thu, 24 Oct 2024 09:00:12 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 autoconf (= 2.72-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.22.5-2),
 autotools-dev (= 20220109.1),
 base-files (= 13.5),
 base-passwd (= 3.6.5),
 bash (= 5.2.32-1+b2),
 binutils (= 2.43.1-5),
 binutils-aarch64-linux-gnu (= 2.43.1-5),
 binutils-common (= 2.43.1-5),
 bsdextrautils (= 2.40.2-9),
 bsdutils (= 1:2.40.2-9),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6),
 coreutils (= 9.5-1),
 cpp (= 4:14.2.0-1),
 cpp-14 (= 14.2.0-7),
 cpp-14-aarch64-linux-gnu (= 14.2.0-7),
 cpp-aarch64-linux-gnu (= 4:14.2.0-1),
 cython3 (= 3.0.11+dfsg-1+debusine1),
 dash (= 0.5.12-9),
 debconf (= 1.5.87),
 debhelper (= 13.20),
 debianutils (= 5.20),
 dh-autoreconf (= 20),
 dh-python (= 6.20240824),
 dh-strip-nondeterminism (= 1.14.0-1),
 diffutils (= 1:3.10-1),
 dpkg (= 1.22.11),
 dpkg-dev (= 1.22.11),
 dwz (= 0.15-1+b1),
 file (= 1:5.45-3),
 findutils (= 4.10.0-3),
 g++ (= 4:14.2.0-1),
 g++-14 (= 14.2.0-7),
 g++-14-aarch64-linux-gnu (= 14.2.0-7),
 g++-aarch64-linux-gnu (= 4:14.2.0-1),
 gcc (= 4:14.2.0-1),
 gcc-14 (= 14.2.0-7),
 gcc-14-aarch64-linux-gnu (= 14.2.0-7),
 gcc-14-base (= 14.2.0-7),
 gcc-aarch64-linux-gnu (= 4:14.2.0-1),
 gettext (= 0.22.5-2),
 gettext-base (= 0.22.5-2),
 grep (= 3.11-4),
 groff-base (= 1.23.0-5),
 gzip (= 1.12-1.1),
 hostname (= 3.25),
 init-system-helpers (= 1.67),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.2-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 14.2.0-7),
 libatomic1 (= 14.2.0-7),
 libattr1 (= 1:2.5.2-2),
 libaudit-common (= 1:4.0.1-1),
 libaudit1 (= 1:4.0.1-1),
 libbinutils (= 2.43.1-5),
 libblas3 (= 3.12.0-3),
 libblkid1 (= 2.40.2-9),
 libbrotli1 (= 1.1.0-2+b4),
 libbz2-1.0 (= 1.0.8-6),
 libc-bin (= 2.40-3),
 libc-dev-bin (= 2.40-3),
 libc6 (= 2.40-3),
 libc6-dev (= 2.40-3),
 libcap-ng0 (= 0.8.5-3),
 libcap2 (= 1:2.66-5),
 libcc1-0 (= 14.2.0-7),
 libcom-err2 (= 1.47.1-1),
 libcrypt-dev (= 1:4.4.36-5),
 libcrypt1 (= 1:4.4.36-5),
 libctf-nobfd0 (= 2.43.1-5),
 libctf0 (= 2.43.1-5),
 libcurl3t64-gnutls (= 8.10.1-2),
 libdb5.3t64 (= 5.3.28+dfsg2-9),
 libdebconfclient0 (= 0.272),
 libdebhelper-perl (= 13.20),
 libdeflate0 (= 1.22-1),
 libdpkg-perl (= 1.22.11),
 libelf1t64 (= 0.192-4),
 libexpat1 (= 2.6.3-1),
 libexpat1-dev (= 2.6.3-1),
 libffi8 (= 3.4.6-1),
 libfile-stripnondeterminism-perl (= 1.14.0-1),
 libgcc-14-dev (= 14.2.0-7),
 libgcc-s1 (= 14.2.0-7),
 libgdbm-compat4t64 (= 1.24-2),
 libgdbm6t64 (= 1.24-2),
 libgfortran5 (= 14.2.0-7),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgnutls30t64 (= 3.8.6-2),
 libgomp1 (= 14.2.0-7),
 libgprofng0 (= 2.43.1-5),
 libgssapi-krb5-2 (= 1.21.3-3),
 libhogweed6t64 (= 3.10-1),
 libhts3t64 (= 1.20+ds-1),
 libhtscodecs2 (= 1.6.1-1),
 libhwasan0 (= 14.2.0-7),
 libicu72 (= 72.1-5),
 libidn2-0 (= 2.3.7-2),
 libisl23 (= 0.27-1),
 libitm1 (= 14.2.0-7),
 libjansson4 (= 2.14-2+b2),
 libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
 libjs-sphinxdoc (= 7.4.7-3),
 libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
 libk5crypto3 (= 1.21.3-3),
 libkeyutils1 (= 1.6.3-3.1),
 libkrb5-3 (= 1.21.3-3),
 libkrb5support0 (= 1.21.3-3),
 liblapack3 (= 3.12.0-3),
 libldap-2.5-0 (= 2.5.18+dfsg-3+b1),
 liblsan0 (= 14.2.0-7),
 liblzma5 (= 5.6.2-2),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmd0 (= 1.1.0-2),
 libmount1 (= 2.40.2-9),
 libmpc3 (= 1.3.1-1+b2),
 libmpfr6 (= 4.2.1-1+b1),
 libncursesw6 (= 6.5-2),
 libnettle8t64 (= 3.10-1),
 libnghttp2-14 (= 1.63.0-1),
 libnghttp3-9 (= 1.4.0-1),
 libngtcp2-16 (= 1.6.0-1),
 libngtcp2-crypto-gnutls8 (= 1.6.0-1),
 libnsl2 (= 1.3.0-3+b2),
 libp11-kit0 (= 0.25.5-2),
 libpam-modules (= 1.5.3-7),
 libpam-modules-bin (= 1.5.3-7),
 libpam-runtime (= 1.5.3-7),
 libpam0g (= 1.5.3-7),
 libpcre2-8-0 (= 10.42-4+b1),
 libperl5.40 (= 5.40.0-6),
 libpipeline1 (= 1.5.8-1),
 libpsl5t64 (= 0.21.2-1.1),
 libpython3-all-dev (= 3.12.6-1+debusine1),
 libpython3-dev (= 3.12.6-1+debusine1),
 libpython3-stdlib (= 3.12.6-1+debusine1),
 libpython3.12-dev (= 3.12.7-1),
 libpython3.12-minimal (= 3.12.7-1),
 libpython3.12-stdlib (= 3.12.7-1),
 libpython3.12t64 (= 3.12.7-1),
 libpython3.13 (= 3.13.0-1),
 libpython3.13-dev (= 3.13.0-1),
 libpython3.13-minimal (= 3.13.0-1),
 libpython3.13-stdlib (= 3.13.0-1),
 libreadline8t64 (= 8.2-5),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4),
 libsasl2-2 (= 2.1.28+dfsg1-8),
 libsasl2-modules-db (= 2.1.28+dfsg1-8),
 libseccomp2 (= 2.5.5-1+b1),
 libselinux1 (= 3.7-3),
 libsframe1 (= 2.43.1-5),
 libsmartcols1 (= 2.40.2-9),
 libsqlite3-0 (= 3.46.1-1),
 libssh2-1t64 (= 1.11.1-1),
 libssl3t64 (= 3.3.2-1),
 libstdc++-14-dev (= 14.2.0-7),
 libstdc++6 (= 14.2.0-7),
 libsystemd0 (= 256.7-2),
 libtasn1-6 (= 4.19.0-3+b2),
 libtinfo6 (= 6.5-2),
 libtirpc-common (= 1.3.4+ds-1.3),
 libtirpc3t64 (= 1.3.4+ds-1.3),
 libtool (= 2.4.7-7),
 libtsan2 (= 14.2.0-7),
 libubsan1 (= 14.2.0-7),
 libuchardet0 (= 0.0.8-1+b1),
 libudev1 (= 256.7-2),
 libunistring5 (= 1.2-1),
 libuuid1 (= 2.40.2-9),
 libxml2 (= 2.12.7+dfsg+really2.9.14-0.1),
 libzstd1 (= 1.5.6+dfsg-1),
 linux-libc-dev (= 6.11.4-1),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.13.0-1),
 mawk (= 1.3.4.20240905-1),
 media-types (= 10.1.0),
 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2),
 netbase (= 6.4),
 openssl-provider-legacy (= 3.3.2-1),
 patch (= 2.7.6-7),
 perl (= 5.40.0-6),
 perl-base (= 5.40.0-6),
 perl-modules-5.40 (= 5.40.0-6),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.12.6-1+debusine1),
 python3-all (= 3.12.6-1+debusine1),
 python3-all-dev (= 3.12.6-1+debusine1),
 python3-autocommand (= 2.2.2-3),
 python3-dev (= 3.12.6-1+debusine1),
 python3-inflect (= 7.3.1-2),
 python3-jaraco.context (= 6.0.0-1),
 python3-jaraco.functools (= 4.1.0-1),
 python3-minimal (= 3.12.6-1+debusine1),
 python3-more-itertools (= 10.5.0-1),
 python3-numpy (= 1:1.26.4+ds-11+bootstrap1),
 python3-pkg-resources (= 74.1.2-2),
 python3-pysam (= 0.22.1+ds-2+debusine1),
 python3-setuptools (= 74.1.2-2),
 python3-typeguard (= 4.3.0-1),
 python3-typing-extensions (= 4.12.2-2),
 python3-zipp (= 3.20.2-1),
 python3.12 (= 3.12.7-1),
 python3.12-dev (= 3.12.7-1),
 python3.12-minimal (= 3.12.7-1),
 python3.13 (= 3.13.0-1),
 python3.13-dev (= 3.13.0-1),
 python3.13-minimal (= 3.13.0-1),
 readline-common (= 8.2-5),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.24),
 sysvinit-utils (= 3.11-1),
 tar (= 1.35+dfsg-3),
 tzdata (= 2024b-3),
 util-linux (= 2.40.2-9),
 xz-utils (= 5.6.2-2),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
 DEB_BUILD_OPTIONS="parallel=8"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 SOURCE_DATE_EPOCH="1729760251"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64.deb
----------------------------------------

 new Debian package, version 2.0.
 size 3580736 bytes: control archive=1156 bytes.
     851 bytes,    12 lines      control
    1356 bytes,    13 lines      md5sums
 Package: tiddit-dbgsym
 Source: tiddit (3.6.1+dfsg-1)
 Version: 3.6.1+dfsg-1+bd1
 Auto-Built-Package: debug-symbols
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 3784
 Depends: tiddit (= 3.6.1+dfsg-1+bd1)
 Section: debug
 Priority: optional
 Description: debug symbols for tiddit
 Build-Ids: 2429a0d5dcb5b32acc4f066089b4bb47d0e9b494 3bcdbea0722db420b23e2a6ace88a87724187d88 3bcff1e2c0a28d835735e54d123168060d2eae62 3f15bd83e5c97cec575d144f85befd0496c5f96c 506e9826cb968d69acd9b2035eb7c01333b1f42b 71220f484cab807e88c1728b84034c02e2549186 754da2f9138279bf2db0c4feb3ac55f01f0d4609 ae33808164d5a58271256131fa0b02b15b968ac8 be6a8b60e8884a4e383fb74c19eacace76ed2ffa db1d775eb25f7ac0357bad3848596eef885ad032 de3afc435604b55918f6c767d5b0961f76b7d4c7 f7a4f5cd372926f1f1d4bfeb6419a1818fba02df

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drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/
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drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.build-id/
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drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.build-id/3f/
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drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.build-id/50/
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-rw-r--r-- root/root    153856 2024-10-24 08:57 ./usr/lib/debug/.build-id/75/4da2f9138279bf2db0c4feb3ac55f01f0d4609.debug
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.build-id/ae/
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-rw-r--r-- root/root    344128 2024-10-24 08:57 ./usr/lib/debug/.build-id/db/1d775eb25f7ac0357bad3848596eef885ad032.debug
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-rw-r--r-- root/root    205376 2024-10-24 08:57 ./usr/lib/debug/.build-id/de/3afc435604b55918f6c767d5b0961f76b7d4c7.debug
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root    171200 2024-10-24 08:57 ./usr/lib/debug/.build-id/f7/a4f5cd372926f1f1d4bfeb6419a1818fba02df.debug
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root     32312 2024-10-24 08:57 ./usr/lib/debug/.dwz/aarch64-linux-gnu/tiddit.debug
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/doc/
lrwxrwxrwx root/root         0 2024-10-24 08:57 ./usr/share/doc/tiddit-dbgsym -> tiddit


tiddit_3.6.1+dfsg-1+bd1_arm64.deb
---------------------------------

 new Debian package, version 2.0.
 size 354344 bytes: control archive=1912 bytes.
     922 bytes,    19 lines      control
    2729 bytes,    27 lines      md5sums
     259 bytes,    12 lines   *  postinst             #!/bin/sh
     372 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: tiddit
 Source: tiddit (3.6.1+dfsg-1)
 Version: 3.6.1+dfsg-1+bd1
 Architecture: arm64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 2408
 Depends: libc6 (>= 2.17), python3 (<< 3.14), python3 (>= 3.12~), python3-numpy, python3-pysam, python3:any, python3-joblib
 Section: science
 Priority: optional
 Homepage: https://github.com/SciLifeLab/TIDDIT
 Description: structural variant calling
  TIDDIT is a tool to used to identify chromosomal rearrangements using
  Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter-
  chromosomal translocations, deletions, tandem-duplications and
  inversions, using supplementary alignments as well as discordant pairs.
  .
  TIDDIT has two analysis modules. The sv mode, which is used to search
  for structural variants. And the cov mode that analyse the read depth of
  a bam file and generates a coverage report.

drwxr-xr-x root/root         0 2024-10-24 08:57 ./
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/bin/
-rwxr-xr-x root/root       954 2024-10-24 08:57 ./usr/bin/tiddit
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/python3/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/
-rw-r--r-- root/root       252 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/dependency_links.txt
-rw-r--r-- root/root        48 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/requires.txt
-rw-r--r-- root/root         7 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit-3.6.1.egg-info/top_level.txt
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/
-rw-r--r-- root/root      3591 2023-07-21 10:06 ./usr/lib/python3/dist-packages/tiddit/DBSCAN.py
-rw-r--r-- root/root         0 2023-07-21 10:06 ./usr/lib/python3/dist-packages/tiddit/__init__.py
-rw-r--r-- root/root     10038 2023-07-21 10:06 ./usr/lib/python3/dist-packages/tiddit/__main__.py
-rw-r--r-- root/root    265808 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_cluster.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    265808 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_cluster.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root    134672 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_contig_analysis.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    134672 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_contig_analysis.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root    134888 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_coverage.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    134888 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_coverage.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root    134672 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_coverage_analysis.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    134672 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_coverage_analysis.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root    202008 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_signal.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    202008 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_signal.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root      1685 2023-07-21 10:06 ./usr/lib/python3/dist-packages/tiddit/tiddit_stats.py
-rw-r--r-- root/root    333176 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_variant.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root    333176 2024-10-24 08:57 ./usr/lib/python3/dist-packages/tiddit/tiddit_variant.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root      4992 2023-07-21 10:06 ./usr/lib/python3/dist-packages/tiddit/tiddit_vcf_header.py
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/doc/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/doc/tiddit/
-rw-r--r-- root/root       224 2024-10-24 08:57 ./usr/share/doc/tiddit/changelog.Debian.arm64.gz
-rw-r--r-- root/root      1320 2024-10-24 08:57 ./usr/share/doc/tiddit/changelog.Debian.gz
-rw-r--r-- root/root      1112 2023-11-08 20:29 ./usr/share/doc/tiddit/copyright
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/man/
drwxr-xr-x root/root         0 2024-10-24 08:57 ./usr/share/man/man1/
-rw-r--r-- root/root       334 2024-10-24 08:57 ./usr/share/man/man1/tiddit.1.gz


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+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
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+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: any
Build-Space: 57544
Build-Time: 162
Distribution: sid
Host Architecture: arm64
Install-Time: 39
Job: /tmp/debusine-fetch-exec-upload-joqpmrtn/tiddit_3.6.1+dfsg-1.dsc
Lintian: pass
Machine Architecture: arm64
Package: tiddit
Package-Time: 241
Source-Version: 3.6.1+dfsg-1
Space: 57544
Status: successful
Version: 3.6.1+dfsg-1+bd1
--------------------------------------------------------------------------------
Finished at 2024-10-24T09:00:13Z
Build needed 00:04:01, 57544k disk space

Relations

Relation Direction Type Name
relates-to Source package tiddit_3.6.1+dfsg-1
relates-to Binary package libpython3-all-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-all-dev_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-dev_3.12.6-1+debusine1_arm64
relates-to Binary package libpython3-stdlib_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-dev_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all-venv_3.12.6-1+debusine1_arm64
relates-to Binary package python3-all_3.12.6-1+debusine1_arm64
relates-to Binary package python3-dbg_3.12.6-1+debusine1_arm64
relates-to Binary package python3-dev_3.12.6-1+debusine1_arm64
relates-to Binary package python3-full_3.12.6-1+debusine1_arm64
relates-to Binary package python3-minimal_3.12.6-1+debusine1_arm64
relates-to Binary package python3-nopie_3.12.6-1+debusine1_arm64
relates-to Binary package python3-venv_3.12.6-1+debusine1_arm64
relates-to Binary package python3_3.12.6-1+debusine1_arm64
relates-to Binary package 2to3_3.12.6-1+debusine1_all
relates-to Binary package idle_3.12.6-1+debusine1_all
relates-to Binary package python3-doc_3.12.6-1+debusine1_all
relates-to Binary package python3-examples_3.12.6-1+debusine1_all
relates-to Binary package python3-numpy-dbgsym_1:1.26.4+ds-11+bootstrap1_arm64
relates-to Binary package python3-numpy_1:1.26.4+ds-11+bootstrap1_arm64
relates-to Binary package cython3-dbgsym_3.0.11+dfsg-1+debusine1_arm64
relates-to Binary package cython3_3.0.11+dfsg-1+debusine1_arm64
relates-to Binary package python3-pysam-dbgsym_0.22.1+ds-2+debusine1_arm64
relates-to Binary package python3-pysam_0.22.1+ds-2+debusine1_arm64
relates-to Binary package tiddit-dbgsym_3.6.1+dfsg-1+bd1_arm64
relates-to Binary package tiddit_3.6.1+dfsg-1+bd1_arm64
relates-to Binary packages tiddit_3.6.1+dfsg-1

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