sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-10.freexian.com
+==============================================================================+
| python-sqt 0.8.0-8+bd1 (arm64) Thu, 24 Oct 2024 16:33:28 +0000 |
+==============================================================================+
Package: python-sqt
Version: 0.8.0-8+bd1
Source Version: 0.8.0-8
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: any
I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/872923/system.tar.xz to /tmp/tmp.sbuild.cmHDPcWrLe...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Chroot Setup Commands |
+------------------------------------------------------------------------------+
rm -f /etc/resolv.conf
----------------------
I: Finished running 'rm -f /etc/resolv.conf'.
Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/libpython3-all-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/libpython3-all-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/libpython3-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/libpython3-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/libpython3-stdlib_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-all-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-all-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-all-venv_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-all_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-dbg_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-dev_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-full_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-minimal_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-nopie_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-venv_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3_3.12.6-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/2to3_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/idle_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-doc_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-examples_3.12.6-1+debusine1_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/cython3-dbgsym_3.0.11+dfsg-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/cython3_3.0.11+dfsg-1+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-pysam-dbgsym_0.22.1+ds-2+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-pysam_0.22.1+ds-2+debusine1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-cutadapt-dbgsym_4.7-2+bd1_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-qkgtcj1w/python3-cutadapt_4.7-2+bd1_arm64.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/python-sqt-k6QdQs/resolver-IhLhfd' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ InRelease
Ign:1 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ InRelease
Get:2 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:4 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ Release.gpg
Ign:4 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ Release.gpg
Get:5 file:/build/python-sqt-k6QdQs/resolver-F3OjNx/apt_archive ./ Packages [28.5 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9916 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4912 kB]
Fetched 15.0 MB in 2s (6264 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages will be upgraded:
apt base-passwd coreutils libapt-pkg6.0t64 libhtml-form-perl libkeyutils1
liblz1 libnet-ssleay-perl sysvinit-utils
9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 5601 kB of archives.
After this operation, 142 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian sid/main arm64 coreutils arm64 9.5-1 [2858 kB]
Get:2 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.10 [922 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 base-passwd arm64 3.6.5 [52.8 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.10 [1332 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 sysvinit-utils arm64 3.11-1 [33.0 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 libhtml-form-perl all 6.12-1 [32.3 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B]
Get:8 http://deb.debian.org/debian sid/main arm64 liblz1 arm64 1.15~pre2-1 [38.1 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libnet-ssleay-perl arm64 1.94-2 [323 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 5601 kB in 0s (45.8 MB/s)
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17073 files and directories currently installed.)
Preparing to unpack .../coreutils_9.5-1_arm64.deb ...
Unpacking coreutils (9.5-1) over (9.4-3.1) ...
Setting up coreutils (9.5-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17073 files and directories currently installed.)
Preparing to unpack .../libapt-pkg6.0t64_2.9.10_arm64.deb ...
Unpacking libapt-pkg6.0t64:arm64 (2.9.10) over (2.9.9) ...
Setting up libapt-pkg6.0t64:arm64 (2.9.10) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17073 files and directories currently installed.)
Preparing to unpack .../base-passwd_3.6.5_arm64.deb ...
Unpacking base-passwd (3.6.5) over (3.6.4) ...
Setting up base-passwd (3.6.5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17074 files and directories currently installed.)
Preparing to unpack .../archives/apt_2.9.10_arm64.deb ...
Unpacking apt (2.9.10) over (2.9.9) ...
Setting up apt (2.9.10) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17074 files and directories currently installed.)
Preparing to unpack .../sysvinit-utils_3.11-1_arm64.deb ...
Unpacking sysvinit-utils (3.11-1) over (3.10-3) ...
Setting up sysvinit-utils (3.11-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 17074 files and directories currently installed.)
Preparing to unpack .../libhtml-form-perl_6.12-1_all.deb ...
Unpacking libhtml-form-perl (6.12-1) over (6.11-2) ...
Preparing to unpack .../libkeyutils1_1.6.3-4_arm64.deb ...
Unpacking libkeyutils1:arm64 (1.6.3-4) over (1.6.3-3) ...
Preparing to unpack .../liblz1_1.15~pre2-1_arm64.deb ...
Unpacking liblz1:arm64 (1.15~pre2-1) over (1.15~pre1-1) ...
Preparing to unpack .../libnet-ssleay-perl_1.94-2_arm64.deb ...
Unpacking libnet-ssleay-perl:arm64 (1.94-2) over (1.94-1+b2) ...
Setting up libnet-ssleay-perl:arm64 (1.94-2) ...
Setting up liblz1:arm64 (1.15~pre2-1) ...
Setting up libkeyutils1:arm64 (1.6.3-4) ...
Setting up libhtml-form-perl (6.12-1) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Local sources
-------------
/tmp/debusine-fetch-exec-upload-qkgtcj1w/python-sqt_0.8.0-8.dsc exists in /tmp/debusine-fetch-exec-upload-qkgtcj1w; copying to chroot
I: NOTICE: Log filtering will replace 'build/python-sqt-k6QdQs/python-sqt-0.8.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-sqt-k6QdQs' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev, python3-setuptools, cython3, python3-cutadapt, python3-pysam, python3-pytest, python3-seaborn, python3-xopen, build-essential, fakeroot, dumb-init
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev, python3-setuptools, cython3, python3-cutadapt, python3-pysam, python3-pytest, python3-seaborn, python3-xopen, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [838 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [808 B]
Fetched 2255 B in 0s (203 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:2 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:3 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot
fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
libelf1t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgcc-14-dev libgfortran5 libgraphite2-3 libharfbuzz0b libhts3t64
libhtscodecs2 libhwasan0 libimagequant0 libisl23 libitm1 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 libmpc3
libmpfr6 libncursesw6 libnsl2 libopenjp2-7 libpng16-16t64 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0
libsharpyuv0 libstdc++-14-dev libtcl8.6 libtiff6 libtirpc-common
libtirpc3t64 libtk8.6 libtool libtsan2 libubsan1 libwebp7 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2
libxrender1 libxslt1.1 libxss1 linux-libc-dev m4 media-types pigz po-debconf
python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs
python3-attr python3-autocommand python3-brotli python3-contourpy
python3-cutadapt python3-cycler python3-dateutil python3-decorator
python3-dev python3-dnaio python3-fonttools python3-fs python3-inflect
python3-iniconfig python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-kiwisolver python3-lxml python3-lz4
python3-matplotlib python3-minimal python3-more-itertools python3-mpmath
python3-numpy python3-packaging python3-pandas python3-pandas-lib
python3-pil python3-pil.imagetk python3-pkg-resources python3-pluggy
python3-pyparsing python3-pysam python3-pytest python3-scipy python3-seaborn
python3-setuptools python3-six python3-sympy python3-tk python3-typeguard
python3-typing-extensions python3-tz python3-ufolib2 python3-xopen
python3-zipp python3.12 python3.12-dev python3.12-minimal python3.12-tk
python3.13 python3.13-dev python3.13-minimal python3.13-tk rpcsvc-proto
tk8.6-blt2.5 unicode-data x11-common zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales
cpp-14-doc cython-doc dh-make flit python3-build python3-installer
python3-wheel gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
gdb-aarch64-linux-gnu libc-devtools glibc-doc libjs-jquery-ui-docs
liblcms2-utils libstdc++-14-doc tcl8.6 tk8.6 libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-doc
python3-venv python-attr-doc python-cycler-doc python-lxml-doc
cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0
inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi
python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc
python3-gmpy2 gfortran python-numpy-doc python-pandas-doc
python3-statsmodels python-pil-doc python-pyparsing-doc python-scipy-doc
python-setuptools-doc texlive-fonts-extra python-sympy-doc tix
python3-tk-dbg python3.12-venv python3.12-doc binfmt-support python3.13-venv
python3.13-doc
Recommended packages:
manpages manpages-dev libarchive-cpio-perl javascript-common libgpm2
libltdl-dev libmail-sendmail-perl python3-bs4 python3-cssselect
python3-html5lib python3-bottleneck python3-numexpr python3-odf
python3-openpyxl python3-tables python3-jinja2 python3-olefile
python3-pygments isympy-common
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dumb-init dwz fakeroot
fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
libelf1t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgcc-14-dev libgfortran5 libgraphite2-3 libharfbuzz0b libhts3t64
libhtscodecs2 libhwasan0 libimagequant0 libisl23 libitm1 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 libmpc3
libmpfr6 libncursesw6 libnsl2 libopenjp2-7 libpng16-16t64 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0
libsharpyuv0 libstdc++-14-dev libtcl8.6 libtiff6 libtirpc-common
libtirpc3t64 libtk8.6 libtool libtsan2 libubsan1 libwebp7 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2
libxrender1 libxslt1.1 libxss1 linux-libc-dev m4 media-types pigz po-debconf
python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs
python3-attr python3-autocommand python3-brotli python3-contourpy
python3-cutadapt python3-cycler python3-dateutil python3-decorator
python3-dev python3-dnaio python3-fonttools python3-fs python3-inflect
python3-iniconfig python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-kiwisolver python3-lxml python3-lz4
python3-matplotlib python3-minimal python3-more-itertools python3-mpmath
python3-numpy python3-packaging python3-pandas python3-pandas-lib
python3-pil python3-pil.imagetk python3-pkg-resources python3-pluggy
python3-pyparsing python3-pysam python3-pytest python3-scipy python3-seaborn
python3-setuptools python3-six python3-sympy python3-tk python3-typeguard
python3-typing-extensions python3-tz python3-ufolib2 python3-xopen
python3-zipp python3.12 python3.12-dev python3.12-minimal python3.12-tk
python3.13 python3.13-dev python3.13-minimal python3.13-tk rpcsvc-proto
sbuild-build-depends-main-dummy tk8.6-blt2.5 unicode-data x11-common
zlib1g-dev
0 upgraded, 180 newly installed, 0 to remove and 0 not upgraded.
Need to get 154 MB/161 MB of archives.
After this operation, 718 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B]
Get:2 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-minimal 3.12.6-1+debusine1 [26.8 kB]
Get:3 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ libpython3-stdlib 3.12.6-1+debusine1 [9732 B]
Get:4 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3 3.12.6-1+debusine1 [27.8 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 pigz arm64 2.8-1 [55.5 kB]
Get:6 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ cython3 3.0.11+dfsg-1+debusine1 [2724 kB]
Get:7 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ libpython3-dev 3.12.6-1+debusine1 [9992 B]
Get:8 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.7-1 [807 kB]
Get:9 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ libpython3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:10 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-all 3.12.6-1+debusine1 [1056 B]
Get:11 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-dev 3.12.6-1+debusine1 [26.1 kB]
Get:12 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-all-dev 3.12.6-1+debusine1 [1084 B]
Get:13 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-cutadapt 4.7-2+bd1 [215 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.3-1 [90.2 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.7-1 [1941 kB]
Get:16 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ python3-pysam 0.22.1+ds-2+debusine1 [3880 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2 [124 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3 [78.4 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b2 [37.7 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.7-1 [1901 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.7-1 [671 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libpython3.13-minimal arm64 3.13.0-1 [849 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 python3.13-minimal arm64 3.13.0-1 [1835 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [982 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 fonts-dejavu-core all 2.37-8 [840 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 fontconfig-config arm64 2.15.0-1.1 [317 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 libfontconfig1 arm64 2.15.0-1.1 [385 kB]
Get:38 http://deb.debian.org/debian sid/main arm64 libxau6 arm64 1:1.0.9-1+b1 [18.1 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 libxdmcp6 arm64 1:1.1.2-3+b1 [24.3 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 libxcb1 arm64 1.17.0-2 [143 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libx11-data all 2:1.8.7-1 [328 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libx11-6 arm64 2:1.8.7-1+b1 [775 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 libxrender1 arm64 1:0.9.10-1.1+b1 [27.0 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libxft2 arm64 2.3.6-1+b1 [51.0 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 x11-common all 1:7.7+23.1 [216 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libxss1 arm64 1:1.2.3-1+b1 [17.0 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 libtk8.6 arm64 8.6.15-1 [738 kB]
Get:49 http://deb.debian.org/debian sid/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [533 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 blt arm64 2.5.3+dfsg-7 [6024 B]
Get:51 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.4-1 [2440 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-7 [9164 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-7 [1280 B]
Get:61 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:62 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:63 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-7 [42.2 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-7 [24.2 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-7 [2578 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-7 [1162 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-7 [2386 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-7 [1040 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-7 [1442 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-7 [2365 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-7 [17.7 MB]
Get:72 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-7 [517 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:74 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:75 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-7 [2265 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-7 [10.1 MB]
Get:77 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-7 [20.0 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:79 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:80 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:81 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:86 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:96 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20240824 [109 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:104 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 fonts-lyx all 2.4.2.1-1 [190 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:109 http://deb.debian.org/debian sid/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB]
Get:110 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-7 [361 kB]
Get:111 http://deb.debian.org/debian sid/main arm64 libgraphite2-3 arm64 1.3.14-2 [69.2 kB]
Get:112 http://deb.debian.org/debian sid/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB]
Get:113 http://deb.debian.org/debian sid/main arm64 libhtscodecs2 arm64 1.6.1-1 [74.6 kB]
Get:114 http://deb.debian.org/debian sid/main arm64 libhts3t64 arm64 1.20+ds-1 [416 kB]
Get:115 http://deb.debian.org/debian sid/main arm64 libimagequant0 arm64 2.18.0-1+b1 [34.6 kB]
Get:116 http://deb.debian.org/debian sid/main arm64 libjbig0 arm64 2.1-6.1+b1 [30.4 kB]
Get:117 http://deb.debian.org/debian sid/main arm64 libjpeg62-turbo arm64 1:2.1.5-3 [172 kB]
Get:118 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:119 http://deb.debian.org/debian sid/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:120 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:121 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:122 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB]
Get:123 http://deb.debian.org/debian sid/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b1 [25.0 kB]
Get:124 http://deb.debian.org/debian sid/main arm64 liblcms2-2 arm64 2.16-2 [151 kB]
Get:125 http://deb.debian.org/debian sid/main arm64 liblerc4 arm64 4.0.0+ds-4+b1 [142 kB]
Get:126 http://deb.debian.org/debian sid/main arm64 libopenjp2-7 arm64 2.5.0-2+b3 [177 kB]
Get:127 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:128 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:129 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:130 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:131 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:132 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:133 http://deb.debian.org/debian sid/main arm64 libqhull-r8.0 arm64 2020.2-6+b1 [226 kB]
Get:134 http://deb.debian.org/debian sid/main arm64 libraqm0 arm64 0.10.1-1+b1 [13.7 kB]
Get:135 http://deb.debian.org/debian sid/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [111 kB]
Get:136 http://deb.debian.org/debian sid/main arm64 libwebp7 arm64 1.4.0-0.1 [267 kB]
Get:137 http://deb.debian.org/debian sid/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB]
Get:138 http://deb.debian.org/debian sid/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [110 kB]
Get:139 http://deb.debian.org/debian sid/main arm64 libwebpmux3 arm64 1.4.0-0.1 [122 kB]
Get:140 http://deb.debian.org/debian sid/main arm64 libxslt1.1 arm64 1.1.35-1.1 [221 kB]
Get:141 http://deb.debian.org/debian sid/main arm64 python-matplotlib-data all 3.8.3-3 [2731 kB]
Get:142 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:143 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:144 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
Get:145 http://deb.debian.org/debian sid/main arm64 python3-appdirs all 1.4.4-4 [12.5 kB]
Get:146 http://deb.debian.org/debian sid/main arm64 python3-attr all 24.2.0-1 [68.4 kB]
Get:147 http://deb.debian.org/debian sid/main arm64 python3-brotli arm64 1.1.0-2+b4 [301 kB]
Get:148 http://deb.debian.org/debian sid/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB]
Get:149 http://deb.debian.org/debian sid/main arm64 python3-contourpy arm64 1.3.0-2 [191 kB]
Get:150 http://deb.debian.org/debian sid/main arm64 python3-xopen all 1.7.0-2 [16.9 kB]
Get:151 http://deb.debian.org/debian sid/main arm64 python3-dnaio arm64 1.2.2-1 [71.5 kB]
Get:152 http://deb.debian.org/debian sid/main arm64 python3-cycler all 0.12.1-1 [9496 B]
Get:153 http://deb.debian.org/debian sid/main arm64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get:154 http://deb.debian.org/debian sid/main arm64 python3-decorator all 5.1.1-5 [15.1 kB]
Get:155 http://deb.debian.org/debian sid/main arm64 python3-tz all 2024.1-2 [30.9 kB]
Get:156 http://deb.debian.org/debian sid/main arm64 python3-six all 1.16.0-7 [16.4 kB]
Get:157 http://deb.debian.org/debian sid/main arm64 python3-fs all 2.4.16-4 [95.4 kB]
Get:158 http://deb.debian.org/debian sid/main arm64 python3-lxml arm64 5.3.0-1 [1096 kB]
Get:159 http://deb.debian.org/debian sid/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b4 [25.1 kB]
Get:160 http://deb.debian.org/debian sid/main arm64 python3-scipy arm64 1.13.1-5 [15.4 MB]
Get:161 http://deb.debian.org/debian sid/main arm64 python3-mpmath all 1.3.0-1 [419 kB]
Get:162 http://deb.debian.org/debian sid/main arm64 python3-sympy all 1.13.3-1 [4147 kB]
Get:163 http://deb.debian.org/debian sid/main arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB]
Get:164 http://deb.debian.org/debian sid/main arm64 unicode-data all 15.1.0-1 [8547 kB]
Get:165 http://deb.debian.org/debian sid/main arm64 python3-fonttools arm64 4.54.1-4 [1356 kB]
Get:166 http://deb.debian.org/debian sid/main arm64 python3-iniconfig all 1.1.1-2 [6396 B]
Get:167 http://deb.debian.org/debian sid/main arm64 python3-kiwisolver arm64 1.4.7-2 [56.7 kB]
Get:168 http://deb.debian.org/debian sid/main arm64 python3-pil arm64 10.4.0-1 [480 kB]
Get:169 http://deb.debian.org/debian sid/main arm64 python3.12-tk arm64 3.12.7-1 [110 kB]
Get:170 http://deb.debian.org/debian sid/main arm64 python3.13-tk arm64 3.13.0-1 [101 kB]
Get:171 http://deb.debian.org/debian sid/main arm64 python3-tk arm64 3.12.6-1 [9428 B]
Get:172 http://deb.debian.org/debian sid/main arm64 python3-pil.imagetk arm64 10.4.0-1 [79.4 kB]
Get:173 http://deb.debian.org/debian sid/main arm64 python3-pyparsing all 3.1.2-1 [146 kB]
Get:174 http://deb.debian.org/debian sid/main arm64 python3-packaging all 24.1-1 [45.8 kB]
Get:175 http://deb.debian.org/debian sid/main arm64 python3-matplotlib arm64 3.8.3-3 [5509 kB]
Get:176 http://deb.debian.org/debian sid/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-4 [3746 kB]
Get:177 http://deb.debian.org/debian sid/main arm64 python3-pandas all 2.2.3+dfsg-4 [3096 kB]
Get:178 http://deb.debian.org/debian sid/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB]
Get:179 http://deb.debian.org/debian sid/main arm64 python3-pytest all 8.3.3-1 [249 kB]
Get:180 http://deb.debian.org/debian sid/main arm64 python3-seaborn all 0.13.2-4 [215 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 154 MB in 2s (100.0 MB/s)
Selecting previously unselected package pigz.
(Reading database ... 17072 files and directories currently installed.)
Preparing to unpack .../archives/pigz_2.8-1_arm64.deb ...
Unpacking pigz (2.8-1) ...
Selecting previously unselected package libpython3.12-minimal:arm64.
Preparing to unpack .../libpython3.12-minimal_3.12.7-1_arm64.deb ...
Unpacking libpython3.12-minimal:arm64 (3.12.7-1) ...
Selecting previously unselected package libexpat1:arm64.
Preparing to unpack .../libexpat1_2.6.3-1_arm64.deb ...
Unpacking libexpat1:arm64 (2.6.3-1) ...
Selecting previously unselected package python3.12-minimal.
Preparing to unpack .../python3.12-minimal_3.12.7-1_arm64.deb ...
Unpacking python3.12-minimal (3.12.7-1) ...
Setting up libpython3.12-minimal:arm64 (3.12.7-1) ...
Setting up libexpat1:arm64 (2.6.3-1) ...
Setting up python3.12-minimal (3.12.7-1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 17401 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.12.6-1+debusine1_arm64.deb ...
Unpacking python3-minimal (3.12.6-1+debusine1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package libncursesw6:arm64.
Preparing to unpack .../2-libncursesw6_6.5-2_arm64.deb ...
Unpacking libncursesw6:arm64 (6.5-2) ...
Selecting previously unselected package libtirpc-common.
Preparing to unpack .../3-libtirpc-common_1.3.4+ds-1.3_all.deb ...
Unpacking libtirpc-common (1.3.4+ds-1.3) ...
Selecting previously unselected package libtirpc3t64:arm64.
Preparing to unpack .../4-libtirpc3t64_1.3.4+ds-1.3_arm64.deb ...
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3) ...
Selecting previously unselected package libnsl2:arm64.
Preparing to unpack .../5-libnsl2_1.3.0-3+b2_arm64.deb ...
Unpacking libnsl2:arm64 (1.3.0-3+b2) ...
Selecting previously unselected package libpython3.12-stdlib:arm64.
Preparing to unpack .../6-libpython3.12-stdlib_3.12.7-1_arm64.deb ...
Unpacking libpython3.12-stdlib:arm64 (3.12.7-1) ...
Selecting previously unselected package python3.12.
Preparing to unpack .../7-python3.12_3.12.7-1_arm64.deb ...
Unpacking python3.12 (3.12.7-1) ...
Selecting previously unselected package libpython3-stdlib:arm64.
Preparing to unpack .../8-libpython3-stdlib_3.12.6-1+debusine1_arm64.deb ...
Unpacking libpython3-stdlib:arm64 (3.12.6-1+debusine1) ...
Setting up python3-minimal (3.12.6-1+debusine1) ...
Selecting previously unselected package python3.
(Reading database ... 17873 files and directories currently installed.)
Preparing to unpack .../000-python3_3.12.6-1+debusine1_arm64.deb ...
Unpacking python3 (3.12.6-1+debusine1) ...
Selecting previously unselected package libpython3.13-minimal:arm64.
Preparing to unpack .../001-libpython3.13-minimal_3.13.0-1_arm64.deb ...
Unpacking libpython3.13-minimal:arm64 (3.13.0-1) ...
Selecting previously unselected package python3.13-minimal.
Preparing to unpack .../002-python3.13-minimal_3.13.0-1_arm64.deb ...
Unpacking python3.13-minimal (3.13.0-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../003-m4_1.4.19-4_arm64.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../004-autoconf_2.72-3_all.deb ...
Unpacking autoconf (2.72-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../006-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ...
Unpacking autopoint (0.22.5-2) ...
Selecting previously unselected package libtcl8.6:arm64.
Preparing to unpack .../008-libtcl8.6_8.6.15+dfsg-2_arm64.deb ...
Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ...
Selecting previously unselected package libpng16-16t64:arm64.
Preparing to unpack .../009-libpng16-16t64_1.6.44-2_arm64.deb ...
Unpacking libpng16-16t64:arm64 (1.6.44-2) ...
Selecting previously unselected package libfreetype6:arm64.
Preparing to unpack .../010-libfreetype6_2.13.3+dfsg-1_arm64.deb ...
Unpacking libfreetype6:arm64 (2.13.3+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-mono.
Preparing to unpack .../011-fonts-dejavu-mono_2.37-8_all.deb ...
Unpacking fonts-dejavu-mono (2.37-8) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../012-fonts-dejavu-core_2.37-8_all.deb ...
Unpacking fonts-dejavu-core (2.37-8) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../013-fontconfig-config_2.15.0-1.1_arm64.deb ...
Unpacking fontconfig-config (2.15.0-1.1) ...
Selecting previously unselected package libfontconfig1:arm64.
Preparing to unpack .../014-libfontconfig1_2.15.0-1.1_arm64.deb ...
Unpacking libfontconfig1:arm64 (2.15.0-1.1) ...
Selecting previously unselected package libxau6:arm64.
Preparing to unpack .../015-libxau6_1%3a1.0.9-1+b1_arm64.deb ...
Unpacking libxau6:arm64 (1:1.0.9-1+b1) ...
Selecting previously unselected package libxdmcp6:arm64.
Preparing to unpack .../016-libxdmcp6_1%3a1.1.2-3+b1_arm64.deb ...
Unpacking libxdmcp6:arm64 (1:1.1.2-3+b1) ...
Selecting previously unselected package libxcb1:arm64.
Preparing to unpack .../017-libxcb1_1.17.0-2_arm64.deb ...
Unpacking libxcb1:arm64 (1.17.0-2) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../018-libx11-data_2%3a1.8.7-1_all.deb ...
Unpacking libx11-data (2:1.8.7-1) ...
Selecting previously unselected package libx11-6:arm64.
Preparing to unpack .../019-libx11-6_2%3a1.8.7-1+b1_arm64.deb ...
Unpacking libx11-6:arm64 (2:1.8.7-1+b1) ...
Selecting previously unselected package libxrender1:arm64.
Preparing to unpack .../020-libxrender1_1%3a0.9.10-1.1+b1_arm64.deb ...
Unpacking libxrender1:arm64 (1:0.9.10-1.1+b1) ...
Selecting previously unselected package libxft2:arm64.
Preparing to unpack .../021-libxft2_2.3.6-1+b1_arm64.deb ...
Unpacking libxft2:arm64 (2.3.6-1+b1) ...
Selecting previously unselected package libxext6:arm64.
Preparing to unpack .../022-libxext6_2%3a1.3.4-1+b2_arm64.deb ...
Unpacking libxext6:arm64 (2:1.3.4-1+b2) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../023-x11-common_1%3a7.7+23.1_all.deb ...
Unpacking x11-common (1:7.7+23.1) ...
Selecting previously unselected package libxss1:arm64.
Preparing to unpack .../024-libxss1_1%3a1.2.3-1+b1_arm64.deb ...
Unpacking libxss1:arm64 (1:1.2.3-1+b1) ...
Selecting previously unselected package libtk8.6:arm64.
Preparing to unpack .../025-libtk8.6_8.6.15-1_arm64.deb ...
Unpacking libtk8.6:arm64 (8.6.15-1) ...
Selecting previously unselected package tk8.6-blt2.5.
Preparing to unpack .../026-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ...
Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Selecting previously unselected package blt.
Preparing to unpack .../027-blt_2.5.3+dfsg-7_arm64.deb ...
Unpacking blt (2.5.3+dfsg-7) ...
Selecting previously unselected package libc-dev-bin.
Preparing to unpack .../028-libc-dev-bin_2.40-3_arm64.deb ...
Unpacking libc-dev-bin (2.40-3) ...
Selecting previously unselected package linux-libc-dev.
Preparing to unpack .../029-linux-libc-dev_6.11.4-1_all.deb ...
Unpacking linux-libc-dev (6.11.4-1) ...
Selecting previously unselected package libcrypt-dev:arm64.
Preparing to unpack .../030-libcrypt-dev_1%3a4.4.36-5_arm64.deb ...
Unpacking libcrypt-dev:arm64 (1:4.4.36-5) ...
Selecting previously unselected package rpcsvc-proto.
Preparing to unpack .../031-rpcsvc-proto_1.4.3-1_arm64.deb ...
Unpacking rpcsvc-proto (1.4.3-1) ...
Selecting previously unselected package libc6-dev:arm64.
Preparing to unpack .../032-libc6-dev_2.40-3_arm64.deb ...
Unpacking libc6-dev:arm64 (2.40-3) ...
Selecting previously unselected package libisl23:arm64.
Preparing to unpack .../033-libisl23_0.27-1_arm64.deb ...
Unpacking libisl23:arm64 (0.27-1) ...
Selecting previously unselected package libmpfr6:arm64.
Preparing to unpack .../034-libmpfr6_4.2.1-1+b1_arm64.deb ...
Unpacking libmpfr6:arm64 (4.2.1-1+b1) ...
Selecting previously unselected package libmpc3:arm64.
Preparing to unpack .../035-libmpc3_1.3.1-1+b2_arm64.deb ...
Unpacking libmpc3:arm64 (1.3.1-1+b2) ...
Selecting previously unselected package cpp-14-aarch64-linux-gnu.
Preparing to unpack .../036-cpp-14-aarch64-linux-gnu_14.2.0-7_arm64.deb ...
Unpacking cpp-14-aarch64-linux-gnu (14.2.0-7) ...
Selecting previously unselected package cpp-14.
Preparing to unpack .../037-cpp-14_14.2.0-7_arm64.deb ...
Unpacking cpp-14 (14.2.0-7) ...
Selecting previously unselected package cpp-aarch64-linux-gnu.
Preparing to unpack .../038-cpp-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package cpp.
Preparing to unpack .../039-cpp_4%3a14.2.0-1_arm64.deb ...
Unpacking cpp (4:14.2.0-1) ...
Selecting previously unselected package libcc1-0:arm64.
Preparing to unpack .../040-libcc1-0_14.2.0-7_arm64.deb ...
Unpacking libcc1-0:arm64 (14.2.0-7) ...
Selecting previously unselected package libitm1:arm64.
Preparing to unpack .../041-libitm1_14.2.0-7_arm64.deb ...
Unpacking libitm1:arm64 (14.2.0-7) ...
Selecting previously unselected package libasan8:arm64.
Preparing to unpack .../042-libasan8_14.2.0-7_arm64.deb ...
Unpacking libasan8:arm64 (14.2.0-7) ...
Selecting previously unselected package liblsan0:arm64.
Preparing to unpack .../043-liblsan0_14.2.0-7_arm64.deb ...
Unpacking liblsan0:arm64 (14.2.0-7) ...
Selecting previously unselected package libtsan2:arm64.
Preparing to unpack .../044-libtsan2_14.2.0-7_arm64.deb ...
Unpacking libtsan2:arm64 (14.2.0-7) ...
Selecting previously unselected package libubsan1:arm64.
Preparing to unpack .../045-libubsan1_14.2.0-7_arm64.deb ...
Unpacking libubsan1:arm64 (14.2.0-7) ...
Selecting previously unselected package libhwasan0:arm64.
Preparing to unpack .../046-libhwasan0_14.2.0-7_arm64.deb ...
Unpacking libhwasan0:arm64 (14.2.0-7) ...
Selecting previously unselected package libgcc-14-dev:arm64.
Preparing to unpack .../047-libgcc-14-dev_14.2.0-7_arm64.deb ...
Unpacking libgcc-14-dev:arm64 (14.2.0-7) ...
Selecting previously unselected package gcc-14-aarch64-linux-gnu.
Preparing to unpack .../048-gcc-14-aarch64-linux-gnu_14.2.0-7_arm64.deb ...
Unpacking gcc-14-aarch64-linux-gnu (14.2.0-7) ...
Selecting previously unselected package gcc-14.
Preparing to unpack .../049-gcc-14_14.2.0-7_arm64.deb ...
Unpacking gcc-14 (14.2.0-7) ...
Selecting previously unselected package gcc-aarch64-linux-gnu.
Preparing to unpack .../050-gcc-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package gcc.
Preparing to unpack .../051-gcc_4%3a14.2.0-1_arm64.deb ...
Unpacking gcc (4:14.2.0-1) ...
Selecting previously unselected package libstdc++-14-dev:arm64.
Preparing to unpack .../052-libstdc++-14-dev_14.2.0-7_arm64.deb ...
Unpacking libstdc++-14-dev:arm64 (14.2.0-7) ...
Selecting previously unselected package g++-14-aarch64-linux-gnu.
Preparing to unpack .../053-g++-14-aarch64-linux-gnu_14.2.0-7_arm64.deb ...
Unpacking g++-14-aarch64-linux-gnu (14.2.0-7) ...
Selecting previously unselected package g++-14.
Preparing to unpack .../054-g++-14_14.2.0-7_arm64.deb ...
Unpacking g++-14 (14.2.0-7) ...
Selecting previously unselected package g++-aarch64-linux-gnu.
Preparing to unpack .../055-g++-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb ...
Unpacking g++-aarch64-linux-gnu (4:14.2.0-1) ...
Selecting previously unselected package g++.
Preparing to unpack .../056-g++_4%3a14.2.0-1_arm64.deb ...
Unpacking g++ (4:14.2.0-1) ...
Selecting previously unselected package build-essential.
Preparing to unpack .../057-build-essential_12.12_arm64.deb ...
Unpacking build-essential (12.12) ...
Selecting previously unselected package cython3.
Preparing to unpack .../058-cython3_3.0.11+dfsg-1+debusine1_arm64.deb ...
Unpacking cython3 (3.0.11+dfsg-1+debusine1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../059-libdebhelper-perl_13.20_all.deb ...
Unpacking libdebhelper-perl (13.20) ...
Selecting previously unselected package libtool.
Preparing to unpack .../060-libtool_2.4.7-7_all.deb ...
Unpacking libtool (2.4.7-7) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../061-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../062-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../063-dh-strip-nondeterminism_1.14.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.14.0-1) ...
Selecting previously unselected package libelf1t64:arm64.
Preparing to unpack .../064-libelf1t64_0.192-4_arm64.deb ...
Unpacking libelf1t64:arm64 (0.192-4) ...
Selecting previously unselected package dwz.
Preparing to unpack .../065-dwz_0.15-1+b1_arm64.deb ...
Unpacking dwz (0.15-1+b1) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../066-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../067-debhelper_13.20_all.deb ...
Unpacking debhelper (13.20) ...
Selecting previously unselected package python3-autocommand.
Preparing to unpack .../068-python3-autocommand_2.2.2-3_all.deb ...
Unpacking python3-autocommand (2.2.2-3) ...
Selecting previously unselected package python3-more-itertools.
Preparing to unpack .../069-python3-more-itertools_10.5.0-1_all.deb ...
Unpacking python3-more-itertools (10.5.0-1) ...
Selecting previously unselected package python3-typing-extensions.
Preparing to unpack .../070-python3-typing-extensions_4.12.2-2_all.deb ...
Unpacking python3-typing-extensions (4.12.2-2) ...
Selecting previously unselected package python3-typeguard.
Preparing to unpack .../071-python3-typeguard_4.3.0-1_all.deb ...
Unpacking python3-typeguard (4.3.0-1) ...
Selecting previously unselected package python3-inflect.
Preparing to unpack .../072-python3-inflect_7.3.1-2_all.deb ...
Unpacking python3-inflect (7.3.1-2) ...
Selecting previously unselected package python3-jaraco.context.
Preparing to unpack .../073-python3-jaraco.context_6.0.0-1_all.deb ...
Unpacking python3-jaraco.context (6.0.0-1) ...
Selecting previously unselected package python3-jaraco.functools.
Preparing to unpack .../074-python3-jaraco.functools_4.1.0-1_all.deb ...
Unpacking python3-jaraco.functools (4.1.0-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../075-python3-pkg-resources_75.2.0-1_all.deb ...
Unpacking python3-pkg-resources (75.2.0-1) ...
Selecting previously unselected package python3-jaraco.text.
Preparing to unpack .../076-python3-jaraco.text_4.0.0-1_all.deb ...
Unpacking python3-jaraco.text (4.0.0-1) ...
Selecting previously unselected package python3-zipp.
Preparing to unpack .../077-python3-zipp_3.20.2-1_all.deb ...
Unpacking python3-zipp (3.20.2-1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../078-python3-setuptools_75.2.0-1_all.deb ...
Unpacking python3-setuptools (75.2.0-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../079-dh-python_6.20240824_all.deb ...
Unpacking dh-python (6.20240824) ...
Selecting previously unselected package dumb-init.
Preparing to unpack .../080-dumb-init_1.2.5-3_arm64.deb ...
Unpacking dumb-init (1.2.5-3) ...
Selecting previously unselected package libfakeroot:arm64.
Preparing to unpack .../081-libfakeroot_1.36-1_arm64.deb ...
Unpacking libfakeroot:arm64 (1.36-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../082-fakeroot_1.36-1_arm64.deb ...
Unpacking fakeroot (1.36-1) ...
Selecting previously unselected package fonts-lyx.
Preparing to unpack .../083-fonts-lyx_2.4.2.1-1_all.deb ...
Unpacking fonts-lyx (2.4.2.1-1) ...
Selecting previously unselected package libblas3:arm64.
Preparing to unpack .../084-libblas3_3.12.0-3_arm64.deb ...
Unpacking libblas3:arm64 (3.12.0-3) ...
Selecting previously unselected package libdeflate0:arm64.
Preparing to unpack .../085-libdeflate0_1.22-1_arm64.deb ...
Unpacking libdeflate0:arm64 (1.22-1) ...
Selecting previously unselected package libexpat1-dev:arm64.
Preparing to unpack .../086-libexpat1-dev_2.6.3-1_arm64.deb ...
Unpacking libexpat1-dev:arm64 (2.6.3-1) ...
Selecting previously unselected package libfribidi0:arm64.
Preparing to unpack .../087-libfribidi0_1.0.15-1_arm64.deb ...
Unpacking libfribidi0:arm64 (1.0.15-1) ...
Selecting previously unselected package libgfortran5:arm64.
Preparing to unpack .../088-libgfortran5_14.2.0-7_arm64.deb ...
Unpacking libgfortran5:arm64 (14.2.0-7) ...
Selecting previously unselected package libgraphite2-3:arm64.
Preparing to unpack .../089-libgraphite2-3_1.3.14-2_arm64.deb ...
Unpacking libgraphite2-3:arm64 (1.3.14-2) ...
Selecting previously unselected package libharfbuzz0b:arm64.
Preparing to unpack .../090-libharfbuzz0b_10.0.1-1_arm64.deb ...
Unpacking libharfbuzz0b:arm64 (10.0.1-1) ...
Selecting previously unselected package libhtscodecs2:arm64.
Preparing to unpack .../091-libhtscodecs2_1.6.1-1_arm64.deb ...
Unpacking libhtscodecs2:arm64 (1.6.1-1) ...
Selecting previously unselected package libhts3t64:arm64.
Preparing to unpack .../092-libhts3t64_1.20+ds-1_arm64.deb ...
Unpacking libhts3t64:arm64 (1.20+ds-1) ...
Selecting previously unselected package libimagequant0:arm64.
Preparing to unpack .../093-libimagequant0_2.18.0-1+b1_arm64.deb ...
Unpacking libimagequant0:arm64 (2.18.0-1+b1) ...
Selecting previously unselected package libjbig0:arm64.
Preparing to unpack .../094-libjbig0_2.1-6.1+b1_arm64.deb ...
Unpacking libjbig0:arm64 (2.1-6.1+b1) ...
Selecting previously unselected package libjpeg62-turbo:arm64.
Preparing to unpack .../095-libjpeg62-turbo_1%3a2.1.5-3_arm64.deb ...
Unpacking libjpeg62-turbo:arm64 (1:2.1.5-3) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../096-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../097-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../098-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../099-libjs-sphinxdoc_7.4.7-3_all.deb ...
Unpacking libjs-sphinxdoc (7.4.7-3) ...
Selecting previously unselected package liblapack3:arm64.
Preparing to unpack .../100-liblapack3_3.12.0-3_arm64.deb ...
Unpacking liblapack3:arm64 (3.12.0-3) ...
Selecting previously unselected package liblbfgsb0:arm64.
Preparing to unpack .../101-liblbfgsb0_3.0+dfsg.4-1+b1_arm64.deb ...
Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ...
Selecting previously unselected package liblcms2-2:arm64.
Preparing to unpack .../102-liblcms2-2_2.16-2_arm64.deb ...
Unpacking liblcms2-2:arm64 (2.16-2) ...
Selecting previously unselected package liblerc4:arm64.
Preparing to unpack .../103-liblerc4_4.0.0+ds-4+b1_arm64.deb ...
Unpacking liblerc4:arm64 (4.0.0+ds-4+b1) ...
Selecting previously unselected package libopenjp2-7:arm64.
Preparing to unpack .../104-libopenjp2-7_2.5.0-2+b3_arm64.deb ...
Unpacking libopenjp2-7:arm64 (2.5.0-2+b3) ...
Selecting previously unselected package libpython3.12t64:arm64.
Preparing to unpack .../105-libpython3.12t64_3.12.7-1_arm64.deb ...
Unpacking libpython3.12t64:arm64 (3.12.7-1) ...
Selecting previously unselected package zlib1g-dev:arm64.
Preparing to unpack .../106-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_arm64.deb ...
Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ...
Selecting previously unselected package libpython3.12-dev:arm64.
Preparing to unpack .../107-libpython3.12-dev_3.12.7-1_arm64.deb ...
Unpacking libpython3.12-dev:arm64 (3.12.7-1) ...
Selecting previously unselected package libpython3-dev:arm64.
Preparing to unpack .../108-libpython3-dev_3.12.6-1+debusine1_arm64.deb ...
Unpacking libpython3-dev:arm64 (3.12.6-1+debusine1) ...
Selecting previously unselected package libpython3.13-stdlib:arm64.
Preparing to unpack .../109-libpython3.13-stdlib_3.13.0-1_arm64.deb ...
Unpacking libpython3.13-stdlib:arm64 (3.13.0-1) ...
Selecting previously unselected package libpython3.13:arm64.
Preparing to unpack .../110-libpython3.13_3.13.0-1_arm64.deb ...
Unpacking libpython3.13:arm64 (3.13.0-1) ...
Selecting previously unselected package libpython3.13-dev:arm64.
Preparing to unpack .../111-libpython3.13-dev_3.13.0-1_arm64.deb ...
Unpacking libpython3.13-dev:arm64 (3.13.0-1) ...
Selecting previously unselected package libpython3-all-dev:arm64.
Preparing to unpack .../112-libpython3-all-dev_3.12.6-1+debusine1_arm64.deb ...
Unpacking libpython3-all-dev:arm64 (3.12.6-1+debusine1) ...
Selecting previously unselected package libqhull-r8.0:arm64.
Preparing to unpack .../113-libqhull-r8.0_2020.2-6+b1_arm64.deb ...
Unpacking libqhull-r8.0:arm64 (2020.2-6+b1) ...
Selecting previously unselected package libraqm0:arm64.
Preparing to unpack .../114-libraqm0_0.10.1-1+b1_arm64.deb ...
Unpacking libraqm0:arm64 (0.10.1-1+b1) ...
Selecting previously unselected package libsharpyuv0:arm64.
Preparing to unpack .../115-libsharpyuv0_1.4.0-0.1_arm64.deb ...
Unpacking libsharpyuv0:arm64 (1.4.0-0.1) ...
Selecting previously unselected package libwebp7:arm64.
Preparing to unpack .../116-libwebp7_1.4.0-0.1_arm64.deb ...
Unpacking libwebp7:arm64 (1.4.0-0.1) ...
Selecting previously unselected package libtiff6:arm64.
Preparing to unpack .../117-libtiff6_4.5.1+git230720-5_arm64.deb ...
Unpacking libtiff6:arm64 (4.5.1+git230720-5) ...
Selecting previously unselected package libwebpdemux2:arm64.
Preparing to unpack .../118-libwebpdemux2_1.4.0-0.1_arm64.deb ...
Unpacking libwebpdemux2:arm64 (1.4.0-0.1) ...
Selecting previously unselected package libwebpmux3:arm64.
Preparing to unpack .../119-libwebpmux3_1.4.0-0.1_arm64.deb ...
Unpacking libwebpmux3:arm64 (1.4.0-0.1) ...
Selecting previously unselected package libxslt1.1:arm64.
Preparing to unpack .../120-libxslt1.1_1.1.35-1.1_arm64.deb ...
Unpacking libxslt1.1:arm64 (1.1.35-1.1) ...
Selecting previously unselected package python-matplotlib-data.
Preparing to unpack .../121-python-matplotlib-data_3.8.3-3_all.deb ...
Unpacking python-matplotlib-data (3.8.3-3) ...
Selecting previously unselected package python3.13.
Preparing to unpack .../122-python3.13_3.13.0-1_arm64.deb ...
Unpacking python3.13 (3.13.0-1) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../123-python3-all_3.12.6-1+debusine1_arm64.deb ...
Unpacking python3-all (3.12.6-1+debusine1) ...
Selecting previously unselected package python3.12-dev.
Preparing to unpack .../124-python3.12-dev_3.12.7-1_arm64.deb ...
Unpacking python3.12-dev (3.12.7-1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../125-python3-dev_3.12.6-1+debusine1_arm64.deb ...
Unpacking python3-dev (3.12.6-1+debusine1) ...
Selecting previously unselected package python3.13-dev.
Preparing to unpack .../126-python3.13-dev_3.13.0-1_arm64.deb ...
Unpacking python3.13-dev (3.13.0-1) ...
Selecting previously unselected package python3-all-dev.
Preparing to unpack .../127-python3-all-dev_3.12.6-1+debusine1_arm64.deb ...
Unpacking python3-all-dev (3.12.6-1+debusine1) ...
Selecting previously unselected package python3-appdirs.
Preparing to unpack .../128-python3-appdirs_1.4.4-4_all.deb ...
Unpacking python3-appdirs (1.4.4-4) ...
Selecting previously unselected package python3-attr.
Preparing to unpack .../129-python3-attr_24.2.0-1_all.deb ...
Unpacking python3-attr (24.2.0-1) ...
Selecting previously unselected package python3-brotli.
Preparing to unpack .../130-python3-brotli_1.1.0-2+b4_arm64.deb ...
Unpacking python3-brotli (1.1.0-2+b4) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../131-python3-numpy_1%3a1.26.4+ds-11_arm64.deb ...
Unpacking python3-numpy (1:1.26.4+ds-11) ...
Selecting previously unselected package python3-contourpy.
Preparing to unpack .../132-python3-contourpy_1.3.0-2_arm64.deb ...
Unpacking python3-contourpy (1.3.0-2) ...
Selecting previously unselected package python3-xopen.
Preparing to unpack .../133-python3-xopen_1.7.0-2_all.deb ...
Unpacking python3-xopen (1.7.0-2) ...
Selecting previously unselected package python3-dnaio.
Preparing to unpack .../134-python3-dnaio_1.2.2-1_arm64.deb ...
Unpacking python3-dnaio (1.2.2-1) ...
Selecting previously unselected package python3-cutadapt.
Preparing to unpack .../135-python3-cutadapt_4.7-2+bd1_arm64.deb ...
Unpacking python3-cutadapt (4.7-2+bd1) ...
Selecting previously unselected package python3-cycler.
Preparing to unpack .../136-python3-cycler_0.12.1-1_all.deb ...
Unpacking python3-cycler (0.12.1-1) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../137-python3-dateutil_2.9.0-3_all.deb ...
Unpacking python3-dateutil (2.9.0-3) ...
Selecting previously unselected package python3-decorator.
Preparing to unpack .../138-python3-decorator_5.1.1-5_all.deb ...
Unpacking python3-decorator (5.1.1-5) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../139-python3-tz_2024.1-2_all.deb ...
Unpacking python3-tz (2024.1-2) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../140-python3-six_1.16.0-7_all.deb ...
Unpacking python3-six (1.16.0-7) ...
Selecting previously unselected package python3-fs.
Preparing to unpack .../141-python3-fs_2.4.16-4_all.deb ...
Unpacking python3-fs (2.4.16-4) ...
Selecting previously unselected package python3-lxml:arm64.
Preparing to unpack .../142-python3-lxml_5.3.0-1_arm64.deb ...
Unpacking python3-lxml:arm64 (5.3.0-1) ...
Selecting previously unselected package python3-lz4.
Preparing to unpack .../143-python3-lz4_4.0.2+dfsg-1+b4_arm64.deb ...
Unpacking python3-lz4 (4.0.2+dfsg-1+b4) ...
Selecting previously unselected package python3-scipy.
Preparing to unpack .../144-python3-scipy_1.13.1-5_arm64.deb ...
Unpacking python3-scipy (1.13.1-5) ...
Selecting previously unselected package python3-mpmath.
Preparing to unpack .../145-python3-mpmath_1.3.0-1_all.deb ...
Unpacking python3-mpmath (1.3.0-1) ...
Selecting previously unselected package python3-sympy.
Preparing to unpack .../146-python3-sympy_1.13.3-1_all.deb ...
Unpacking python3-sympy (1.13.3-1) ...
Selecting previously unselected package python3-ufolib2.
Preparing to unpack .../147-python3-ufolib2_0.16.0+dfsg1-1_all.deb ...
Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ...
Selecting previously unselected package unicode-data.
Preparing to unpack .../148-unicode-data_15.1.0-1_all.deb ...
Unpacking unicode-data (15.1.0-1) ...
Selecting previously unselected package python3-fonttools.
Preparing to unpack .../149-python3-fonttools_4.54.1-4_arm64.deb ...
Unpacking python3-fonttools (4.54.1-4) ...
Selecting previously unselected package python3-iniconfig.
Preparing to unpack .../150-python3-iniconfig_1.1.1-2_all.deb ...
Unpacking python3-iniconfig (1.1.1-2) ...
Selecting previously unselected package python3-kiwisolver.
Preparing to unpack .../151-python3-kiwisolver_1.4.7-2_arm64.deb ...
Unpacking python3-kiwisolver (1.4.7-2) ...
Selecting previously unselected package python3-pil:arm64.
Preparing to unpack .../152-python3-pil_10.4.0-1_arm64.deb ...
Unpacking python3-pil:arm64 (10.4.0-1) ...
Selecting previously unselected package python3.12-tk.
Preparing to unpack .../153-python3.12-tk_3.12.7-1_arm64.deb ...
Unpacking python3.12-tk (3.12.7-1) ...
Selecting previously unselected package python3.13-tk.
Preparing to unpack .../154-python3.13-tk_3.13.0-1_arm64.deb ...
Unpacking python3.13-tk (3.13.0-1) ...
Selecting previously unselected package python3-tk:arm64.
Preparing to unpack .../155-python3-tk_3.12.6-1_arm64.deb ...
Unpacking python3-tk:arm64 (3.12.6-1) ...
Selecting previously unselected package python3-pil.imagetk:arm64.
Preparing to unpack .../156-python3-pil.imagetk_10.4.0-1_arm64.deb ...
Unpacking python3-pil.imagetk:arm64 (10.4.0-1) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../157-python3-pyparsing_3.1.2-1_all.deb ...
Unpacking python3-pyparsing (3.1.2-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../158-python3-packaging_24.1-1_all.deb ...
Unpacking python3-packaging (24.1-1) ...
Selecting previously unselected package python3-matplotlib.
Preparing to unpack .../159-python3-matplotlib_3.8.3-3_arm64.deb ...
Unpacking python3-matplotlib (3.8.3-3) ...
Selecting previously unselected package python3-pandas-lib:arm64.
Preparing to unpack .../160-python3-pandas-lib_2.2.3+dfsg-4_arm64.deb ...
Unpacking python3-pandas-lib:arm64 (2.2.3+dfsg-4) ...
Selecting previously unselected package python3-pandas.
Preparing to unpack .../161-python3-pandas_2.2.3+dfsg-4_all.deb ...
Unpacking python3-pandas (2.2.3+dfsg-4) ...
Selecting previously unselected package python3-pluggy.
Preparing to unpack .../162-python3-pluggy_1.5.0-1_all.deb ...
Unpacking python3-pluggy (1.5.0-1) ...
Selecting previously unselected package python3-pysam.
Preparing to unpack .../163-python3-pysam_0.22.1+ds-2+debusine1_arm64.deb ...
Unpacking python3-pysam (0.22.1+ds-2+debusine1) ...
Selecting previously unselected package python3-pytest.
Preparing to unpack .../164-python3-pytest_8.3.3-1_all.deb ...
Unpacking python3-pytest (8.3.3-1) ...
Selecting previously unselected package python3-seaborn.
Preparing to unpack .../165-python3-seaborn_0.13.2-4_all.deb ...
Unpacking python3-seaborn (0.13.2-4) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../166-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up libhtscodecs2:arm64 (1.6.1-1) ...
Setting up media-types (10.1.0) ...
Setting up dumb-init (1.2.5-3) ...
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libgraphite2-3:arm64 (1.3.14-2) ...
Setting up liblcms2-2:arm64 (2.16-2) ...
Setting up libsharpyuv0:arm64 (1.4.0-0.1) ...
Setting up libxau6:arm64 (1:1.0.9-1+b1) ...
Setting up libxdmcp6:arm64 (1:1.1.2-3+b1) ...
Setting up libxcb1:arm64 (1.17.0-2) ...
Setting up liblerc4:arm64 (4.0.0+ds-4+b1) ...
Setting up libtirpc-common (1.3.4+ds-1.3) ...
Setting up fonts-lyx (2.4.2.1-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libdebhelper-perl (13.20) ...
Setting up x11-common (1:7.7+23.1) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block.
Setting up libdeflate0:arm64 (1.22-1) ...
Setting up linux-libc-dev (6.11.4-1) ...
Setting up m4 (1.4.19-4) ...
Setting up libqhull-r8.0:arm64 (2020.2-6+b1) ...
Setting up libjbig0:arm64 (2.1-6.1+b1) ...
Setting up libfakeroot:arm64 (1.36-1) ...
Setting up libelf1t64:arm64 (0.192-4) ...
Setting up fakeroot (1.36-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Setting up unicode-data (15.1.0-1) ...
Setting up libpython3.13-minimal:arm64 (3.13.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libblas3:arm64 (3.12.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
Setting up rpcsvc-proto (1.4.3-1) ...
Setting up libjpeg62-turbo:arm64 (1:2.1.5-3) ...
Setting up libx11-data (2:1.8.7-1) ...
Setting up libmpfr6:arm64 (4.2.1-1+b1) ...
Setting up libfribidi0:arm64 (1.0.15-1) ...
Setting up libimagequant0:arm64 (2.18.0-1+b1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libpng16-16t64:arm64 (1.6.44-2) ...
Setting up libmpc3:arm64 (1.3.1-1+b2) ...
Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ...
Setting up autopoint (0.22.5-2) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up libncursesw6:arm64 (6.5-2) ...
Setting up libgfortran5:arm64 (14.2.0-7) ...
Setting up autoconf (2.72-3) ...
Setting up libwebp7:arm64 (1.4.0-0.1) ...
Setting up libubsan1:arm64 (14.2.0-7) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up dwz (0.15-1+b1) ...
Setting up libhwasan0:arm64 (14.2.0-7) ...
Setting up pigz (2.8-1) ...
Setting up libcrypt-dev:arm64 (1:4.4.36-5) ...
Setting up libtiff6:arm64 (4.5.1+git230720-5) ...
Setting up libasan8:arm64 (14.2.0-7) ...
Setting up libxslt1.1:arm64 (1.1.35-1.1) ...
Setting up libhts3t64:arm64 (1.20+ds-1) ...
Setting up libopenjp2-7:arm64 (2.5.0-2+b3) ...
Setting up python3.13-minimal (3.13.0-1) ...
Setting up libx11-6:arm64 (2:1.8.7-1+b1) ...
Setting up libtsan2:arm64 (14.2.0-7) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libisl23:arm64 (0.27-1) ...
Setting up libc-dev-bin (2.40-3) ...
Setting up python-matplotlib-data (3.8.3-3) ...
Setting up libwebpmux3:arm64 (1.4.0-0.1) ...
Setting up libpython3.13-stdlib:arm64 (3.13.0-1) ...
Setting up libcc1-0:arm64 (14.2.0-7) ...
Setting up liblsan0:arm64 (14.2.0-7) ...
Setting up libitm1:arm64 (14.2.0-7) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up libpython3.13:arm64 (3.13.0-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up liblapack3:arm64 (3.12.0-3) ...
update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
Setting up libxrender1:arm64 (1:0.9.10-1.1+b1) ...
Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3) ...
Setting up python3.13 (3.13.0-1) ...
Setting up fontconfig-config (2.15.0-1.1) ...
Setting up libwebpdemux2:arm64 (1.4.0-0.1) ...
Setting up libxext6:arm64 (2:1.3.4-1+b2) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ...
Setting up libjs-sphinxdoc (7.4.7-3) ...
Setting up cpp-14-aarch64-linux-gnu (14.2.0-7) ...
Setting up libnsl2:arm64 (1.3.0-3+b2) ...
Setting up libc6-dev:arm64 (2.40-3) ...
Setting up libharfbuzz0b:arm64 (10.0.1-1) ...
Setting up libxss1:arm64 (1:1.2.3-1+b1) ...
Setting up libfontconfig1:arm64 (2.15.0-1.1) ...
Setting up libgcc-14-dev:arm64 (14.2.0-7) ...
Setting up libstdc++-14-dev:arm64 (14.2.0-7) ...
Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ...
Setting up libxft2:arm64 (2.3.6-1+b1) ...
Setting up libpython3.12-stdlib:arm64 (3.12.7-1) ...
Setting up libtk8.6:arm64 (8.6.15-1) ...
Setting up python3.12 (3.12.7-1) ...
Setting up python3.12-tk (3.12.7-1) ...
Setting up python3.13-tk (3.13.0-1) ...
Setting up libpython3.12t64:arm64 (3.12.7-1) ...
Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up libexpat1-dev:arm64 (2.6.3-1) ...
Setting up libraqm0:arm64 (0.10.1-1+b1) ...
Setting up cpp-14 (14.2.0-7) ...
Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ...
Setting up cpp (4:14.2.0-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-7) ...
Setting up libpython3-stdlib:arm64 (3.12.6-1+debusine1) ...
Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up g++-14-aarch64-linux-gnu (14.2.0-7) ...
Setting up blt (2.5.3+dfsg-7) ...
Setting up python3 (3.12.6-1+debusine1) ...
Setting up libpython3.12-dev:arm64 (3.12.7-1) ...
Setting up python3-zipp (3.20.2-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up python3-tz (2024.1-2) ...
Setting up gcc-14 (14.2.0-7) ...
Setting up python3-six (1.16.0-7) ...
Setting up python3-pil:arm64 (10.4.0-1) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-packaging (24.1-1) ...
Setting up python3-pyparsing (3.1.2-1) ...
Setting up python3-brotli (1.1.0-2+b4) ...
Setting up libpython3.13-dev:arm64 (3.13.0-1) ...
Setting up python3-cycler (0.12.1-1) ...
Setting up python3-kiwisolver (1.4.7-2) ...
Setting up python3.12-dev (3.12.7-1) ...
Setting up cython3 (3.0.11+dfsg-1+debusine1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up python3-pluggy (1.5.0-1) ...
Setting up python3-lxml:arm64 (5.3.0-1) ...
Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up python3-dateutil (2.9.0-3) ...
Setting up g++-14 (14.2.0-7) ...
Setting up python3-mpmath (1.3.0-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sympy (1.13.3-1) ...
Setting up python3-attr (24.2.0-1) ...
Setting up python3-pysam (0.22.1+ds-2+debusine1) ...
Setting up libpython3-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libtool (2.4.7-7) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b4) ...
Setting up python3.13-dev (3.13.0-1) ...
Setting up python3-pytest (8.3.3-1) ...
Setting up python3-typeguard (4.3.0-1) ...
Setting up python3-all (3.12.6-1+debusine1) ...
Setting up python3-tk:arm64 (3.12.6-1) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-pil.imagetk:arm64 (10.4.0-1) ...
Setting up libpython3-all-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.12.6-1+debusine1) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up python3-all-dev (3.12.6-1+debusine1) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up debhelper (13.20) ...
Setting up python3-fs (2.4.16-4) ...
Setting up python3-xopen (1.7.0-2) ...
Setting up python3-numpy (1:1.26.4+ds-11) ...
Setting up python3-contourpy (1.3.0-2) ...
Setting up python3-dnaio (1.2.2-1) ...
Setting up dh-python (6.20240824) ...
Setting up python3-scipy (1.13.1-5) ...
Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-4) ...
Setting up python3-pandas (2.2.3+dfsg-4) ...
Setting up python3-cutadapt (4.7-2+bd1) ...
Setting up python3-fonttools (4.54.1-4) ...
Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
Setting up python3-matplotlib (3.8.3-3) ...
Setting up python3-seaborn (0.13.2-4) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.40-3) ...
Processing triggers for man-db (2.13.0-1) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-7 gcc-14_14.2.0-7 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 linux-libc-dev_6.11.4-1
Package versions: appstream_1.0.3-1 apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 blt_2.5.3+dfsg-7 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1 cpp_4:14.2.0-1 cpp-14_14.2.0-7 cpp-14-aarch64-linux-gnu_14.2.0-7 cpp-aarch64-linux-gnu_4:14.2.0-1 cython3_3.0.11+dfsg-1+debusine1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20240824 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 fontconfig-config_2.15.0-1.1 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.4.2.1-1 g++_4:14.2.0-1 g++-14_14.2.0-7 g++-14-aarch64-linux-gnu_14.2.0-7 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-7 gcc-14-aarch64-linux-gnu_14.2.0-7 gcc-14-base_14.2.0-7 gcc-aarch64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 gpg_2.2.44-1 gpgconf_2.2.44-1 gpgv_2.2.44-1 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 iso-codes_4.17.0-1 libacl1_2.3.2-2 libaliased-perl_0.34-3 libappstream5_1.0.3-1 libapt-pkg-perl_0.1.40+b6 libapt-pkg6.0t64_2.9.10 libarchive-zip-perl_1.68-1 libasan8_14.2.0-7 libassuan9_3.0.1-2 libatomic1_14.2.0-7 libattr1_1:2.5.2-2 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libb-hooks-endofscope-perl_0.28-1 libb-hooks-op-check-perl_0.22-3+b2 libberkeleydb-perl_0.66-1 libbinutils_2.43.1-5 libblas3_3.12.0-3 libblkid1_2.40.2-9 libbrotli1_1.1.0-2+b4 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libcap-ng0_0.8.5-3 libcap2_1:2.66-5 libcapture-tiny-perl_0.48-2 libcc1-0_14.2.0-7 libcgi-pm-perl_4.66-1 libclass-data-inheritable-perl_0.08-3 libclass-inspector-perl_1.36-3 libclass-method-modifiers-perl_2.15-1 libclass-xsaccessor-perl_1.19-4+b4 libclone-perl_0.47-1+b1 libcom-err2_1.47.1-1 libconfig-tiny-perl_2.30-1 libconst-fast-perl_0.014-2 libcpanel-json-xs-perl_4.38-1+b1 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libcurl3t64-gnutls_8.10.1-2 libdata-dpath-perl_0.60-1 libdata-messagepack-perl_1.02-1+b4 libdata-optlist-perl_0.114-1 libdata-validate-domain-perl_0.15-1 libdata-validate-ip-perl_0.31-1 libdata-validate-uri-perl_0.07-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.272 libdebhelper-perl_13.20 libdeflate0_1.22-1 libdevel-callchecker-perl_0.009-1+b1 libdevel-size-perl_0.84-1+b1 libdevel-stacktrace-perl_2.0500-1 libdpkg-perl_1.22.11 libdynaloader-functions-perl_0.004-1 libelf1t64_0.192-4 libemail-address-xs-perl_1.05-1+b4 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libexpat1_2.6.3-1 libexpat1-dev_2.6.3-1 libext2fs2t64_1.47.1-1 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-basedir-perl_0.09-2 libfile-find-rule-perl_0.34-3 libfile-listing-perl_6.16-1 libfile-sharedir-perl_1.118-3 libfile-stripnondeterminism-perl_1.14.0-1 libfont-ttf-perl_1.06-2 libfontconfig1_2.15.0-1.1 libfreetype6_2.13.3+dfsg-1 libfribidi0_1.0.15-1 libgcc-14-dev_14.2.0-7 libgcc-s1_14.2.0-7 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgfortran5_14.2.0-7 libglib2.0-0t64_2.82.2-1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-7 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgraphite2-3_1.3.14-2 libgssapi-krb5-2_1.21.3-3 libharfbuzz0b_10.0.1-1 libhogweed6t64_3.10-1 libhtml-form-perl_6.12-1 libhtml-html5-entities-perl_0.004-3 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tokeparser-simple-perl_3.16-4 libhtml-tree-perl_5.07-3 libhts3t64_1.20+ds-1 libhtscodecs2_1.6.1-1 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_7.00-2 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-7 libicu72_72.1-5 libidn2-0_2.3.7-2 libimagequant0_2.18.0-1+b1 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-interactive-perl_1.025-1 libio-socket-ssl-perl_2.089-1 libio-string-perl_1.08-4 libipc-run3-perl_0.049-1 libipc-system-simple-perl_1.30-2 libisl23_0.27-1 libiterator-perl_0.03+ds1-2 libiterator-util-perl_0.02+ds1-2 libitm1_14.2.0-7 libjansson4_2.14-2+b2 libjbig0_2.1-6.1+b1 libjpeg62-turbo_1:2.1.5-3 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_7.4.7-3 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libjson-maybexs-perl_1.004008-1 libk5crypto3_1.21.3-3 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-3 libkrb5support0_1.21.3-3 liblapack3_3.12.0-3 liblbfgsb0_3.0+dfsg.4-1+b1 liblcms2-2_2.16-2 libldap-2.5-0_2.5.18+dfsg-3+b1 liblerc4_4.0.0+ds-4+b1 liblist-compare-perl_0.55-2 liblist-someutils-perl_0.59-1 liblist-utilsby-perl_0.12-2 liblsan0_14.2.0-7 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.14-1 liblz1_1.15~pre2-1 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 liblzo2-2_2.10-3 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmarkdown2_2.2.7-2+b1 libmd0_1.1.0-2 libmldbm-perl_2.05-4 libmodule-implementation-perl_0.09-2 libmodule-runtime-perl_0.016-2 libmoo-perl_2.005005-1 libmoox-aliases-perl_0.001006-2 libmount1_2.40.2-9 libmouse-perl_2.5.11-1+b1 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnamespace-clean-perl_0.27-2 libncursesw6_6.5-2 libnet-domain-tld-perl_1.75-4 libnet-http-perl_6.23-1 libnet-ipv6addr-perl_1.02-1 libnet-netmask-perl_2.0002-2 libnet-ssleay-perl_1.94-2 libnetaddr-ip-perl_4.079+dfsg-2+b4 libnettle8t64_3.10-1 libnghttp2-14_1.63.0-1 libnghttp3-9_1.4.0-1 libngtcp2-16_1.6.0-1 libngtcp2-crypto-gnutls8_1.6.0-1 libnsl2_1.3.0-3+b2 libnumber-compare-perl_0.03-3 libopenjp2-7_2.5.0-2+b3 libp11-kit0_0.25.5-2 libpackage-stash-perl_0.40-1 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libparams-classify-perl_0.015-2+b4 libparams-util-perl_1.102-3+b1 libpath-tiny-perl_0.146-1 libpcre2-8-0_10.42-4+b1 libperl5.40_5.40.0-6 libperlio-gzip-perl_0.20-1+b4 libperlio-utf8-strict-perl_0.010-1+b3 libpipeline1_1.5.8-1 libpng16-16t64_1.6.44-2 libproc-processtable-perl_0.636-1+b3 libpsl5t64_0.21.2-1.1 libpython3-all-dev_3.12.6-1+debusine1 libpython3-dev_3.12.6-1+debusine1 libpython3-stdlib_3.12.6-1+debusine1 libpython3.12-dev_3.12.7-1 libpython3.12-minimal_3.12.7-1 libpython3.12-stdlib_3.12.7-1 libpython3.12t64_3.12.7-1 libpython3.13_3.13.0-1 libpython3.13-dev_3.13.0-1 libpython3.13-minimal_3.13.0-1 libpython3.13-stdlib_3.13.0-1 libqhull-r8.0_2020.2-6+b1 libraqm0_0.10.1-1+b1 libreadline8t64_8.2-5 libregexp-wildcards-perl_1.05-3 librole-tiny-perl_2.002004-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b1 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsereal-decoder-perl_5.004+ds-1+b3 libsereal-encoder-perl_5.004+ds-1+b3 libsframe1_2.43.1-5 libsharpyuv0_1.4.0-0.1 libsmartcols1_2.40.2-9 libsort-versions-perl_1.62-3 libsqlite3-0_3.46.1-1 libss2_1.47.1-1 libssh2-1t64_1.11.1-1 libssl3t64_3.3.2-1 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 libstemmer0d_2.2.0-4+b1 libstrictures-perl_2.000006-1 libsub-exporter-perl_0.990-1 libsub-exporter-progressive-perl_0.001013-3 libsub-identify-perl_0.14-3+b3 libsub-install-perl_0.929-1 libsub-name-perl_0.27-1+b3 libsub-quote-perl_2.006008-1 libsyntax-keyword-try-perl_0.30-1+b1 libsystemd0_256.7-2 libtasn1-6_4.19.0-3+b2 libtcl8.6_8.6.15+dfsg-2 libterm-readkey-perl_2.38-2+b4 libtext-glob-perl_0.11-3 libtext-levenshteinxs-perl_0.03-5+b4 libtext-markdown-discount-perl_0.16-1+b3 libtext-xslate-perl_3.5.9-2+b1 libtiff6_4.5.1+git230720-5 libtime-duration-perl_1.21-2 libtime-moment-perl_0.44-2+b4 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtirpc-common_1.3.4+ds-1.3 libtirpc3t64_1.3.4+ds-1.3 libtk8.6_8.6.15-1 libtool_2.4.7-7 libtry-tiny-perl_0.32-1 libtsan2_14.2.0-7 libubsan1_14.2.0-7 libuchardet0_0.0.8-1+b1 libudev1_256.7-2 libunicode-utf8-perl_0.62-2+b3 libunistring5_1.2-1 liburi-perl_5.30-1 libuuid1_2.40.2-9 libvariable-magic-perl_0.64-1+b1 libwebp7_1.4.0-0.1 libwebpdemux2_1.4.0-0.1 libwebpmux3_1.4.0-0.1 libwww-mechanize-perl_2.19-1 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.8.7-1+b1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1+b1 libxcb1_1.17.0-2 libxdmcp6_1:1.1.2-3+b1 libxext6_2:1.3.4-1+b2 libxft2_2.3.6-1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml2_2.12.7+dfsg+really2.9.14-0.1 libxmlb2_0.3.21-1 libxrender1_1:0.9.10-1.1+b1 libxs-parse-keyword-perl_0.46-1+b1 libxslt1.1_1.1.35-1.1 libxss1_1:1.2.3-1+b1 libxxhash0_0.8.2-2+b1 libyaml-0-2_0.2.5-1+b1 libyaml-libyaml-perl_0.902.0+ds-2+b1 libzstd1_1.5.6+dfsg-1 lintian_2.119.0 linux-libc-dev_6.11.4-1 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 logsave_1.47.1-1 lzop_1.04-2 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 media-types_10.1.0 mount_2.40.2-9 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openssl_3.3.2-1 openssl-provider-legacy_3.3.2-1 passwd_1:4.16.0-4 patch_2.7.6-7 patchutils_0.4.2-1 perl_5.40.0-6 perl-base_5.40.0-6 perl-modules-5.40_5.40.0-6 perl-openssl-defaults_7+b2 pigz_2.8-1 plzip_1.11-2 po-debconf_1.0.21+nmu1 python-matplotlib-data_3.8.3-3 python3_3.12.6-1+debusine1 python3-all_3.12.6-1+debusine1 python3-all-dev_3.12.6-1+debusine1 python3-appdirs_1.4.4-4 python3-attr_24.2.0-1 python3-autocommand_2.2.2-3 python3-brotli_1.1.0-2+b4 python3-contourpy_1.3.0-2 python3-cutadapt_4.7-2+bd1 python3-cycler_0.12.1-1 python3-dateutil_2.9.0-3 python3-decorator_5.1.1-5 python3-dev_3.12.6-1+debusine1 python3-dnaio_1.2.2-1 python3-fonttools_4.54.1-4 python3-fs_2.4.16-4 python3-inflect_7.3.1-2 python3-iniconfig_1.1.1-2 python3-jaraco.context_6.0.0-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-kiwisolver_1.4.7-2 python3-lxml_5.3.0-1 python3-lz4_4.0.2+dfsg-1+b4 python3-matplotlib_3.8.3-3 python3-minimal_3.12.6-1+debusine1 python3-more-itertools_10.5.0-1 python3-mpmath_1.3.0-1 python3-numpy_1:1.26.4+ds-11 python3-packaging_24.1-1 python3-pandas_2.2.3+dfsg-4 python3-pandas-lib_2.2.3+dfsg-4 python3-pil_10.4.0-1 python3-pil.imagetk_10.4.0-1 python3-pkg-resources_75.2.0-1 python3-pluggy_1.5.0-1 python3-pyparsing_3.1.2-1 python3-pysam_0.22.1+ds-2+debusine1 python3-pytest_8.3.3-1 python3-scipy_1.13.1-5 python3-seaborn_0.13.2-4 python3-setuptools_75.2.0-1 python3-six_1.16.0-7 python3-sympy_1.13.3-1 python3-tk_3.12.6-1 python3-typeguard_4.3.0-1 python3-typing-extensions_4.12.2-2 python3-tz_2024.1-2 python3-ufolib2_0.16.0+dfsg1-1 python3-xopen_1.7.0-2 python3-zipp_3.20.2-1 python3.12_3.12.7-1 python3.12-dev_3.12.7-1 python3.12-minimal_3.12.7-1 python3.12-tk_3.12.7-1 python3.13_3.13.0-1 python3.13-dev_3.13.0-1 python3.13-minimal_3.13.0-1 python3.13-tk_3.13.0-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4 tar_1.35+dfsg-3 tk8.6-blt2.5_2.5.3+dfsg-7 tzdata_2024b-3 ucf_3.0043+nmu1 unicode-data_15.1.0-1 unzip_6.0-28 util-linux_2.40.2-9 x11-common_1:7.7+23.1 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: python-sqt
Binary: python3-sqt
Architecture: any
Version: 0.8.0-8
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Homepage: https://bitbucket.org/marcelm/sqt
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/python-sqt
Vcs-Git: https://salsa.debian.org/med-team/python-sqt.git
Testsuite: autopkgtest-pkg-pybuild
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev, python3-setuptools, cython3, python3-cutadapt <!nocheck>, python3-pysam <!nocheck>, python3-pytest <!nocheck>, python3-seaborn <!nocheck>, python3-xopen <!nocheck>
Package-List:
python3-sqt deb python optional arch=any
Checksums-Sha1:
6b7dee79483ed5ff1168329817a4999da6007033 116482 python-sqt_0.8.0.orig.tar.gz
05f456d5047bc1c4c62de6e58037df9cd209b1de 6984 python-sqt_0.8.0-8.debian.tar.xz
Checksums-Sha256:
86a938fcf41d64a175c234b2156b674d5f4d615fa869341d985c0e05480e5f22 116482 python-sqt_0.8.0.orig.tar.gz
1f7426e8a6836dbcc4d98ec653707778b07ea7a8e1ccb6417ca245bafcb0241d 6984 python-sqt_0.8.0-8.debian.tar.xz
Files:
ae2f5949c3841194ad87c4fb6036a8db 116482 python-sqt_0.8.0.orig.tar.gz
96982dea78fdd92da470b6e3a887dd71 6984 python-sqt_0.8.0-8.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=p736
-----END PGP SIGNATURE-----
gpgv: Signature made Wed Dec 6 13:52:44 2023 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./python-sqt_0.8.0-8.dsc: no acceptable signature found
dpkg-source: info: extracting python-sqt in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-sqt_0.8.0.orig.tar.gz
dpkg-source: info: unpacking python-sqt_0.8.0-8.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fixme_ignore_failing_test.patch
dpkg-source: info: applying fixme_ignore_failing_test2.patch
dpkg-source: info: applying pytest.patch
dpkg-source: info: applying python-3.12.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 0.8.0-8+bd1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mDebusine Rebuild <debusine@example.net> -B -rfakeroot
dpkg-buildpackage: info: source package python-sqt
dpkg-buildpackage: info: source version 0.8.0-8+bd1
dpkg-buildpackage: info: source distribution sid
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=sqt/_version.py
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p "3.13 3.12"
I: pybuild base:311: python3.13 setup.py clean
/<<PKGBUILDDIR>>/versioneer.py:485: SyntaxWarning: invalid escape sequence '\s'
LONG_VERSION_PY['git'] = '''
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
I: pybuild base:311: python3.12 setup.py clean
/<<PKGBUILDDIR>>/versioneer.py:485: SyntaxWarning: invalid escape sequence '\s'
LONG_VERSION_PY['git'] = '''
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-sqt.substvars debian/files
rm -fr -- debian/python3-sqt/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
pybuild --configure -i python{version} -p "3.13 3.12"
I: pybuild base:311: python3.13 setup.py config
/<<PKGBUILDDIR>>/versioneer.py:485: SyntaxWarning: invalid escape sequence '\s'
LONG_VERSION_PY['git'] = '''
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running config
I: pybuild base:311: python3.12 setup.py config
/<<PKGBUILDDIR>>/versioneer.py:485: SyntaxWarning: invalid escape sequence '\s'
LONG_VERSION_PY['git'] = '''
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running config
dh_auto_build -a -O--buildsystem=pybuild
pybuild --build -i python{version} -p "3.13 3.12"
I: pybuild base:311: /usr/bin/python3.13 setup.py build
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/intervaltree.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/math.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/_codons.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/region.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/reads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/compat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/cigar.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/ansicolor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/args.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
copying sqt/dna.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
copying sqt/io/gtf.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
copying sqt/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
copying sqt/io/fasta.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
copying sqt/io/bam.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
copying sqt/io/sff.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/chars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/translate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
copying sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
/<<PKGBUILDDIR>>/setup.py:48: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<<PKGBUILDDIR>>/sqt/_helpers.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
Compiling sqt/_helpers.pyx because it changed.
[1/1] Cythonizing sqt/_helpers.pyx
building 'sqt._helpers' extension
creating build/temp.linux-aarch64-cpython-313/sqt
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c sqt/_helpers.c -o build/temp.linux-aarch64-cpython-313/sqt/_helpers.o
sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’:
sqt/_helpers.c:22538:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22538 | __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]);
| ~~~~~~~~~~^~~~~~~~~~~~
sqt/_helpers.c:22547:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22547 | __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]);
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
sqt/_helpers.c:22556:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22556 | __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]);
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/sqt/_helpers.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_helpers.cpython-313-aarch64-linux-gnu.so
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/intervaltree.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/math.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/_codons.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/region.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/qualtrim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/colorspace.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/reads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/compat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/cigar.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/ansicolor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/args.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
copying sqt/dna.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
copying sqt/io/gtf.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
copying sqt/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
copying sqt/io/fasta.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
copying sqt/io/bam.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
copying sqt/io/sff.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/chars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/align.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/translate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
copying sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
/<<PKGBUILDDIR>>/setup.py:48: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
building 'sqt._helpers' extension
creating build/temp.linux-aarch64-cpython-312/sqt
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c sqt/_helpers.c -o build/temp.linux-aarch64-cpython-312/sqt/_helpers.o
sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’:
sqt/_helpers.c:22538:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22538 | __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]);
| ~~~~~~~~~~^~~~~~~~~~~~
sqt/_helpers.c:22547:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22547 | __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]);
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
sqt/_helpers.c:22556:51: warning: array subscript has type ‘char’ [-Wchar-subscripts]
22556 | __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]);
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/sqt/_helpers.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_helpers.cpython-312-aarch64-linux-gnu.so
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
LC_ALL=C.UTF-8 dh_auto_test
pybuild --test --test-pytest -i python{version} -p "3.13 3.12"
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build; python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build
configfile: pytest.ini
plugins: typeguard-4.3.0
collected 45 items
tests/testalign.py ....... [ 15%]
tests/testcigar.py ........... [ 40%]
tests/testcolorspace.py .. [ 44%]
tests/testdna.py ...... [ 57%]
tests/testfasta.py ............. [ 86%]
tests/testindexedfasta.py ... [ 93%]
tests/testintervaltree.py . [ 95%]
tests/testmedian.py . [ 97%]
tests/testregion.py . [100%]
============================== 45 passed in 5.78s ==============================
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build; python3.12 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build
configfile: pytest.ini
plugins: typeguard-4.3.0
collected 45 items
tests/testalign.py ....... [ 15%]
tests/testcigar.py ........... [ 40%]
tests/testcolorspace.py .. [ 44%]
tests/testdna.py ...... [ 57%]
tests/testfasta.py ............. [ 86%]
tests/testindexedfasta.py ... [ 93%]
tests/testintervaltree.py . [ 95%]
tests/testmedian.py . [ 97%]
tests/testregion.py . [100%]
============================== 45 passed in 5.88s ==============================
rm -fr -- /tmp/dh-xdg-rundir-a7k0aVb4
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
rm -f -- debian/python3-sqt.substvars
rm -fr -- debian/.debhelper/generated/python3-sqt/ debian/python3-sqt/ debian/tmp/
dh_auto_install --destdir=debian/python3-sqt/ -a -O--buildsystem=pybuild
install -m0755 -d /<<PKGBUILDDIR>>/debian/python3-sqt
pybuild --install -i python{version} -p "3.13 3.12" --dest-dir /<<PKGBUILDDIR>>/debian/python3-sqt
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-sqt
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
/<<PKGBUILDDIR>>/setup.py:48: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/intervaltree.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_helpers.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/math.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/dna.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/align.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/_codons.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/region.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/intervaltree.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/utils.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/cigar.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/compat.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/args.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/colorspace.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/_version.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__pycache__/math.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_codons.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/utils.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/chars.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/translate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/region.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/qualtrim.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/colorspace.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/reads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/compat.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/__pycache__/fasta.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/__pycache__/gtf.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/__pycache__/__init__.cpython-313.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/gtf.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/fasta.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/bam.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/io/sff.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/_version.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/__main__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/cigar.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/ansicolor.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/args.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/sqt/dna.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache/v
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/.pytest_cache/v/cache/stepwise -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/.pytest_cache/v/cache/nodeids -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/.pytest_cache/README.md -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/.pytest_cache/CACHEDIR.TAG -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_sqt/build/.pytest_cache/.gitignore -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/.pytest_cache
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/intervaltree.py to intervaltree.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/math.py to math.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/_codons.py to _codons.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/utils.py to utils.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/chars.py to chars.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/histogram.py to histogram.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/bameof.py to bameof.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/simreads.py to simreads.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/align.py to align.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/coverage.py to coverage.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/readcov.py to readcov.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/translate.py to translate.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/commands/mutate.py to mutate.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/region.py to region.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/qualtrim.py to qualtrim.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/align.py to align.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/colorspace.py to colorspace.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/reads.py to reads.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/compat.py to compat.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/gtf.py to gtf.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/__init__.py to __init__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/fasta.py to fasta.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/bam.py to bam.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/io/sff.py to sff.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/_version.py to _version.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/__main__.py to __main__.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/cigar.py to cigar.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/ansicolor.py to ansicolor.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/args.py to args.cpython-313.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt/dna.py to dna.cpython-313.pyc
running install_egg_info
running egg_info
creating sqt.egg-info
writing sqt.egg-info/PKG-INFO
writing dependency_links to sqt.egg-info/dependency_links.txt
writing entry points to sqt.egg-info/entry_points.txt
writing requirements to sqt.egg-info/requires.txt
writing top-level names to sqt.egg-info/top_level.txt
writing manifest file 'sqt.egg-info/SOURCES.txt'
reading manifest file 'sqt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'sqt.egg-info/SOURCES.txt'
Copying sqt.egg-info to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.13/dist-packages/sqt-0.8.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing sqt script to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/bin
I: pybuild base:311: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-sqt
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_version.py
set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_version.py to '0.8.0'
running build_ext
/<<PKGBUILDDIR>>/setup.py:48: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
if LooseVersion(cyversion) < LooseVersion(MIN_CYTHON_VERSION):
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/intervaltree.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/math.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/align.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/dna.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/args.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/region.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/_codons.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/cigar.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/utils.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/math.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/intervaltree.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/_version.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/compat.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__pycache__/colorspace.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_codons.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/utils.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/chars.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/readlenhisto.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/histogram.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/bameof.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/fastxmod.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/fastagrep.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/addadapt.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/qualityguess.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/simreads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/bamstats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/coverage.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/readcov.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/translate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/checkfastqpe.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/compare_sequences.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/fastastats.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/bam2fastq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/cutvect.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/randomseq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/samsetop.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/fixbam64.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/qgramfreq.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/checkvcfref.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/samfixn.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/fastaextract.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/commands/mutate.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/region.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/qualtrim.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/align.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/colorspace.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/reads.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/compat.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/__pycache__/gtf.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/__pycache__/fasta.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/__pycache__/__init__.cpython-312.pyc -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/gtf.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/fasta.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/bam.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/io/sff.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_helpers.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/_version.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/__main__.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/cigar.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/ansicolor.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/args.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/sqt/dna.py -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache/v
creating /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/.pytest_cache/v/cache/stepwise -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/.pytest_cache/v/cache/nodeids -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/.pytest_cache/README.md -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/.pytest_cache/CACHEDIR.TAG -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sqt/build/.pytest_cache/.gitignore -> /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/.pytest_cache
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/intervaltree.py to intervaltree.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/math.py to math.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/_codons.py to _codons.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/utils.py to utils.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/chars.py to chars.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/histogram.py to histogram.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/bameof.py to bameof.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/simreads.py to simreads.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/align.py to align.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/coverage.py to coverage.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/readcov.py to readcov.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/translate.py to translate.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/commands/mutate.py to mutate.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/region.py to region.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/qualtrim.py to qualtrim.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/align.py to align.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/colorspace.py to colorspace.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/reads.py to reads.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/compat.py to compat.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/gtf.py to gtf.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/__init__.py to __init__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/fasta.py to fasta.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/bam.py to bam.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/io/sff.py to sff.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/_version.py to _version.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/__main__.py to __main__.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/cigar.py to cigar.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/ansicolor.py to ansicolor.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/args.py to args.cpython-312.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt/dna.py to dna.cpython-312.pyc
running install_egg_info
running egg_info
writing sqt.egg-info/PKG-INFO
writing dependency_links to sqt.egg-info/dependency_links.txt
writing entry points to sqt.egg-info/entry_points.txt
writing requirements to sqt.egg-info/requires.txt
writing top-level names to sqt.egg-info/top_level.txt
reading manifest file 'sqt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'sqt.egg-info/SOURCES.txt'
Copying sqt.egg-info to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/lib/python3.12/dist-packages/sqt-0.8.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing sqt script to /<<PKGBUILDDIR>>/debian/python3-sqt/usr/bin
dh_installdocs -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/usr/share/doc/python3-sqt
install -p -m0644 debian/README.Debian debian/python3-sqt/usr/share/doc/python3-sqt/README.Debian
install -p -m0644 debian/copyright debian/python3-sqt/usr/share/doc/python3-sqt/copyright
dh_installchangelogs -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/usr/share/doc/python3-sqt
install -p -m0644 debian/.debhelper/generated/python3-sqt/dh_installchangelogs.dch.trimmed debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python3-sqt/dh_installchangelogs.dch.binnmu debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian.arm64
dh_installman -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/usr/share/man/man1/
install -p -m0644 ./debian/sqt.1 debian/python3-sqt/usr/share/man/man1/sqt.1
man-recode --to-code UTF-8 --suffix .dh-new debian/python3-sqt/usr/share/man/man1/sqt.1
mv debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new debian/python3-sqt/usr/share/man/man1/sqt.1
chmod 0644 -- debian/python3-sqt/usr/share/man/man1/sqt.1
dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:180: version: 6.20240824
D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=True, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild'])
D: dh_python3 dh_python3:183: supported Python versions: 3.12,3.13 (default=3.12)
D: dh_python3 debhelper:174: source=python-sqt, binary packages=['python3-sqt']
D: dh_python3 dh_python3:205: processing package python3-sqt...
D: dh_python3 fs:50: moving files from debian/python3-sqt/usr/lib/python3.12/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/
D: dh_python3 fs:50: moving files from debian/python3-sqt/usr/lib/python3.13/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/
D: dh_python3 fs:246: removing dist-packages/.pytest_cache
D: dh_python3 fs:335: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12'), Version('3.13')}, 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-sqt
D: dh_python3 pydist:173: trying to find dependency for cutadapt (python=None)
D: dh_python3 pydist:207: dependency: module seems to be installed
D: dh_python3 pydist:270: dependency: included in build-deps
D: dh_python3 pydist:173: trying to find dependency for matplotlib (python=None)
D: dh_python3 pydist:207: dependency: module seems to be installed
D: dh_python3 pydist:270: dependency: included in build-deps
D: dh_python3 pydist:173: trying to find dependency for pysam!=0.9.0 (python=None)
D: dh_python3 pydist:207: dependency: module seems to be installed
D: dh_python3 pydist:270: dependency: included in build-deps
D: dh_python3 pydist:173: trying to find dependency for seaborn (python=None)
D: dh_python3 pydist:207: dependency: module seems to be installed
D: dh_python3 pydist:270: dependency: included in build-deps
D: dh_python3 pydist:173: trying to find dependency for xopen (python=None)
D: dh_python3 pydist:207: dependency: module seems to be installed
D: dh_python3 pydist:270: dependency: included in build-deps
D: dh_python3 depends:253: D={'python3:any', 'python3 (>= 3.12~)', 'python3-pysam', 'python3-cutadapt', 'python3-seaborn', 'python3-matplotlib', 'python3-xopen', 'python3 (<< 3.14)'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
cd debian/python3-sqt
chmod a-x usr/share/doc/python3-sqt/changelog.Debian usr/share/doc/python3-sqt/changelog.Debian.arm64 usr/share/man/man1/sqt.1
gzip -9nf usr/share/doc/python3-sqt/changelog.Debian usr/share/doc/python3-sqt/changelog.Debian.arm64 usr/share/man/man1/sqt.1
cd '/<<PKGBUILDDIR>>'
dh_fixperms -a -O--buildsystem=pybuild
find debian/python3-sqt ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-sqt/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-sqt/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-sqt/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-sqt/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-sqt -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-sqt/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/python3-sqt/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu
dwz -mdebian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug -- debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so
objcopy --compress-debug-sections debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug
chmod 0644 -- debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug
dh_strip -a -O--buildsystem=pybuild
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/4a
objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/4a/558d09e458df764ad624ce67b80ef117398210.debug
chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/4a/558d09e458df764ad624ce67b80ef117398210.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/4a/558d09e458df764ad624ce67b80ef117398210.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/09
objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/09/f0c077255895624c930228ffb574ef13c93065.debug
chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/09/f0c077255895624c930228ffb574ef13c93065.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/09/f0c077255895624c930228ffb574ef13c93065.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-sqt/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-sqt/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-sqt/usr/lib/debug
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc
ln -s python3-sqt debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc/python3-sqt-dbgsym
install -m0755 -d debian/.debhelper/python3-sqt
dh_makeshlibs -a -O--buildsystem=pybuild
rm -f debian/python3-sqt/DEBIAN/shlibs
dh_shlibdeps -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/DEBIAN
dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dh_installdeb -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/postinst
cat debian/python3-sqt.postinst.debhelper >> debian/python3-sqt/DEBIAN/postinst
chmod 0755 -- debian/python3-sqt/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/prerm
cat debian/python3-sqt.prerm.debhelper >> debian/python3-sqt/DEBIAN/prerm
chmod 0755 -- debian/python3-sqt/DEBIAN/prerm
dh_gencontrol -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/DEBIAN
echo misc:Depends= >> debian/python3-sqt.substvars
echo misc:Pre-Depends= >> debian/python3-sqt.substvars
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -cdebian/control -Pdebian/.debhelper/python3-sqt/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-sqt-dbgsym "-DDepends=python3-sqt (= \${binary:Version})" "-DDescription=debug symbols for python3-sqt" "-DBuild-Ids=09f0c077255895624c930228ffb574ef13c93065 4a558d09e458df764ad624ce67b80ef117398210" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -cdebian/control -Pdebian/python3-sqt
chmod 0644 -- debian/python3-sqt/DEBIAN/control
dh_md5sums -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-sqt/DEBIAN
cd debian/python3-sqt >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-sqt/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN
cd debian/.debhelper/python3-sqt/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-sqt ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-sqt/dbgsym-root ..
dpkg-deb: building package 'python3-sqt' in '../python3-sqt_0.8.0-8+bd1_arm64.deb'.
dpkg-deb: building package 'python3-sqt-dbgsym' in '../python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb'.
dpkg-genbuildinfo --build=any -O../python-sqt_0.8.0-8+bd1_arm64.buildinfo
dpkg-genchanges --build=any -mDebusine Rebuild <debusine@example.net> -O../python-sqt_0.8.0-8+bd1_arm64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=sqt/_version.py
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-10-24T16:36:26Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
python-sqt_0.8.0-8+bd1_arm64.changes:
-------------------------------------
Format: 1.8
Date: Thu, 24 Oct 2024 16:35:41 +0000
Source: python-sqt (0.8.0-8)
Binary: python3-sqt python3-sqt-dbgsym
Binary-Only: yes
Architecture: arm64
Version: 0.8.0-8+bd1
Distribution: sid
Urgency: low
Maintainer: Debusine Rebuild <debusine@example.net>
Changed-By: Debusine Rebuild <debusine@example.net>
Description:
python3-sqt - SeQuencing Tools for biological DNA/RNA high-throughput data
Changes:
python-sqt (0.8.0-8+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
Checksums-Sha1:
c33931da48a6c5580f1ca48eed47ad7ea6dc0f76 10284 python-sqt_0.8.0-8+bd1_arm64.buildinfo
219c62f99622bbc21592c9bdab06a13d37f0d084 786192 python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
3d6a5cd1fa5b1840ebf0dcd52d138e6d50cfb49d 139168 python3-sqt_0.8.0-8+bd1_arm64.deb
Checksums-Sha256:
ac2904da1e4891641e67cca0c52ef624c6fdb34a7c41a6a98f23733a486307e1 10284 python-sqt_0.8.0-8+bd1_arm64.buildinfo
39483249db101719888f348c7b0088c02978fa52ccb646e79b36530c2ffd5301 786192 python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
d35e944ef837689400404506a10d7d117d3be54ecb1b6f1ef41860fc09a1a4c2 139168 python3-sqt_0.8.0-8+bd1_arm64.deb
Files:
5715c604d569219a6aced9eea0ab0ddd 10284 science optional python-sqt_0.8.0-8+bd1_arm64.buildinfo
46aa0b489c65c8f7cd885725064655dd 786192 debug optional python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
00ce8ba2164aa1b5abca5beab47a3e88 139168 python optional python3-sqt_0.8.0-8+bd1_arm64.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: python-sqt (0.8.0-8)
Binary: python3-sqt python3-sqt-dbgsym
Architecture: arm64
Version: 0.8.0-8+bd1
Binary-Only-Changes:
python-sqt (0.8.0-8+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
.
-- Debusine Rebuild <debusine@example.net> Thu, 24 Oct 2024 16:35:41 +0000
Checksums-Md5:
46aa0b489c65c8f7cd885725064655dd 786192 python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
00ce8ba2164aa1b5abca5beab47a3e88 139168 python3-sqt_0.8.0-8+bd1_arm64.deb
Checksums-Sha1:
219c62f99622bbc21592c9bdab06a13d37f0d084 786192 python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
3d6a5cd1fa5b1840ebf0dcd52d138e6d50cfb49d 139168 python3-sqt_0.8.0-8+bd1_arm64.deb
Checksums-Sha256:
39483249db101719888f348c7b0088c02978fa52ccb646e79b36530c2ffd5301 786192 python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
d35e944ef837689400404506a10d7d117d3be54ecb1b6f1ef41860fc09a1a4c2 139168 python3-sqt_0.8.0-8+bd1_arm64.deb
Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Thu, 24 Oct 2024 16:36:25 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
autoconf (= 2.72-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.22.5-2),
autotools-dev (= 20220109.1),
base-files (= 13.5),
base-passwd (= 3.6.5),
bash (= 5.2.32-1+b2),
binutils (= 2.43.1-5),
binutils-aarch64-linux-gnu (= 2.43.1-5),
binutils-common (= 2.43.1-5),
blt (= 2.5.3+dfsg-7),
bsdextrautils (= 2.40.2-9),
bsdutils (= 1:2.40.2-9),
build-essential (= 12.12),
bzip2 (= 1.0.8-6),
coreutils (= 9.5-1),
cpp (= 4:14.2.0-1),
cpp-14 (= 14.2.0-7),
cpp-14-aarch64-linux-gnu (= 14.2.0-7),
cpp-aarch64-linux-gnu (= 4:14.2.0-1),
cython3 (= 3.0.11+dfsg-1+debusine1),
dash (= 0.5.12-9),
debconf (= 1.5.87),
debhelper (= 13.20),
debianutils (= 5.20),
dh-autoreconf (= 20),
dh-python (= 6.20240824),
dh-strip-nondeterminism (= 1.14.0-1),
diffutils (= 1:3.10-1),
dpkg (= 1.22.11),
dpkg-dev (= 1.22.11),
dwz (= 0.15-1+b1),
file (= 1:5.45-3),
findutils (= 4.10.0-3),
fontconfig-config (= 2.15.0-1.1),
fonts-dejavu-core (= 2.37-8),
fonts-dejavu-mono (= 2.37-8),
fonts-lyx (= 2.4.2.1-1),
g++ (= 4:14.2.0-1),
g++-14 (= 14.2.0-7),
g++-14-aarch64-linux-gnu (= 14.2.0-7),
g++-aarch64-linux-gnu (= 4:14.2.0-1),
gcc (= 4:14.2.0-1),
gcc-14 (= 14.2.0-7),
gcc-14-aarch64-linux-gnu (= 14.2.0-7),
gcc-14-base (= 14.2.0-7),
gcc-aarch64-linux-gnu (= 4:14.2.0-1),
gettext (= 0.22.5-2),
gettext-base (= 0.22.5-2),
grep (= 3.11-4),
groff-base (= 1.23.0-5),
gzip (= 1.12-1.1),
hostname (= 3.25),
init-system-helpers (= 1.67),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.2-2),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 14.2.0-7),
libatomic1 (= 14.2.0-7),
libattr1 (= 1:2.5.2-2),
libaudit-common (= 1:4.0.1-1),
libaudit1 (= 1:4.0.1-1),
libbinutils (= 2.43.1-5),
libblas3 (= 3.12.0-3),
libblkid1 (= 2.40.2-9),
libbrotli1 (= 1.1.0-2+b4),
libbsd0 (= 0.12.2-2),
libbz2-1.0 (= 1.0.8-6),
libc-bin (= 2.40-3),
libc-dev-bin (= 2.40-3),
libc6 (= 2.40-3),
libc6-dev (= 2.40-3),
libcap-ng0 (= 0.8.5-3),
libcap2 (= 1:2.66-5),
libcc1-0 (= 14.2.0-7),
libcom-err2 (= 1.47.1-1),
libcrypt-dev (= 1:4.4.36-5),
libcrypt1 (= 1:4.4.36-5),
libctf-nobfd0 (= 2.43.1-5),
libctf0 (= 2.43.1-5),
libcurl3t64-gnutls (= 8.10.1-2),
libdb5.3t64 (= 5.3.28+dfsg2-9),
libdebconfclient0 (= 0.272),
libdebhelper-perl (= 13.20),
libdeflate0 (= 1.22-1),
libdpkg-perl (= 1.22.11),
libelf1t64 (= 0.192-4),
libexpat1 (= 2.6.3-1),
libexpat1-dev (= 2.6.3-1),
libffi8 (= 3.4.6-1),
libfile-stripnondeterminism-perl (= 1.14.0-1),
libfontconfig1 (= 2.15.0-1.1),
libfreetype6 (= 2.13.3+dfsg-1),
libfribidi0 (= 1.0.15-1),
libgcc-14-dev (= 14.2.0-7),
libgcc-s1 (= 14.2.0-7),
libgcrypt20 (= 1.11.0-6),
libgdbm-compat4t64 (= 1.24-2),
libgdbm6t64 (= 1.24-2),
libgfortran5 (= 14.2.0-7),
libglib2.0-0t64 (= 2.82.2-1),
libgmp10 (= 2:6.3.0+dfsg-2+b1),
libgnutls30t64 (= 3.8.6-2),
libgomp1 (= 14.2.0-7),
libgpg-error0 (= 1.50-4),
libgprofng0 (= 2.43.1-5),
libgraphite2-3 (= 1.3.14-2),
libgssapi-krb5-2 (= 1.21.3-3),
libharfbuzz0b (= 10.0.1-1),
libhogweed6t64 (= 3.10-1),
libhts3t64 (= 1.20+ds-1),
libhtscodecs2 (= 1.6.1-1),
libhwasan0 (= 14.2.0-7),
libicu72 (= 72.1-5),
libidn2-0 (= 2.3.7-2),
libimagequant0 (= 2.18.0-1+b1),
libisl23 (= 0.27-1),
libitm1 (= 14.2.0-7),
libjansson4 (= 2.14-2+b2),
libjbig0 (= 2.1-6.1+b1),
libjpeg62-turbo (= 1:2.1.5-3),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-jquery-ui (= 1.13.2+dfsg-1),
libjs-sphinxdoc (= 7.4.7-3),
libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
libk5crypto3 (= 1.21.3-3),
libkeyutils1 (= 1.6.3-4),
libkrb5-3 (= 1.21.3-3),
libkrb5support0 (= 1.21.3-3),
liblapack3 (= 3.12.0-3),
liblbfgsb0 (= 3.0+dfsg.4-1+b1),
liblcms2-2 (= 2.16-2),
libldap-2.5-0 (= 2.5.18+dfsg-3+b1),
liblerc4 (= 4.0.0+ds-4+b1),
liblsan0 (= 14.2.0-7),
liblz4-1 (= 1.9.4-3),
liblzma5 (= 5.6.2-2),
libmagic-mgc (= 1:5.45-3),
libmagic1t64 (= 1:5.45-3),
libmd0 (= 1.1.0-2),
libmount1 (= 2.40.2-9),
libmpc3 (= 1.3.1-1+b2),
libmpfr6 (= 4.2.1-1+b1),
libncursesw6 (= 6.5-2),
libnettle8t64 (= 3.10-1),
libnghttp2-14 (= 1.63.0-1),
libnghttp3-9 (= 1.4.0-1),
libngtcp2-16 (= 1.6.0-1),
libngtcp2-crypto-gnutls8 (= 1.6.0-1),
libnsl2 (= 1.3.0-3+b2),
libopenjp2-7 (= 2.5.0-2+b3),
libp11-kit0 (= 0.25.5-2),
libpam-modules (= 1.5.3-7),
libpam-modules-bin (= 1.5.3-7),
libpam-runtime (= 1.5.3-7),
libpam0g (= 1.5.3-7),
libpcre2-8-0 (= 10.42-4+b1),
libperl5.40 (= 5.40.0-6),
libpipeline1 (= 1.5.8-1),
libpng16-16t64 (= 1.6.44-2),
libpsl5t64 (= 0.21.2-1.1),
libpython3-all-dev (= 3.12.6-1+debusine1),
libpython3-dev (= 3.12.6-1+debusine1),
libpython3-stdlib (= 3.12.6-1+debusine1),
libpython3.12-dev (= 3.12.7-1),
libpython3.12-minimal (= 3.12.7-1),
libpython3.12-stdlib (= 3.12.7-1),
libpython3.12t64 (= 3.12.7-1),
libpython3.13 (= 3.13.0-1),
libpython3.13-dev (= 3.13.0-1),
libpython3.13-minimal (= 3.13.0-1),
libpython3.13-stdlib (= 3.13.0-1),
libqhull-r8.0 (= 2020.2-6+b1),
libraqm0 (= 0.10.1-1+b1),
libreadline8t64 (= 8.2-5),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4),
libsasl2-2 (= 2.1.28+dfsg1-8),
libsasl2-modules-db (= 2.1.28+dfsg1-8),
libseccomp2 (= 2.5.5-1+b1),
libselinux1 (= 3.7-3),
libsframe1 (= 2.43.1-5),
libsharpyuv0 (= 1.4.0-0.1),
libsmartcols1 (= 2.40.2-9),
libsqlite3-0 (= 3.46.1-1),
libssh2-1t64 (= 1.11.1-1),
libssl3t64 (= 3.3.2-1),
libstdc++-14-dev (= 14.2.0-7),
libstdc++6 (= 14.2.0-7),
libsystemd0 (= 256.7-2),
libtasn1-6 (= 4.19.0-3+b2),
libtcl8.6 (= 8.6.15+dfsg-2),
libtiff6 (= 4.5.1+git230720-5),
libtinfo6 (= 6.5-2),
libtirpc-common (= 1.3.4+ds-1.3),
libtirpc3t64 (= 1.3.4+ds-1.3),
libtk8.6 (= 8.6.15-1),
libtool (= 2.4.7-7),
libtsan2 (= 14.2.0-7),
libubsan1 (= 14.2.0-7),
libuchardet0 (= 0.0.8-1+b1),
libudev1 (= 256.7-2),
libunistring5 (= 1.2-1),
libuuid1 (= 2.40.2-9),
libwebp7 (= 1.4.0-0.1),
libwebpdemux2 (= 1.4.0-0.1),
libwebpmux3 (= 1.4.0-0.1),
libx11-6 (= 2:1.8.7-1+b1),
libx11-data (= 2:1.8.7-1),
libxau6 (= 1:1.0.9-1+b1),
libxcb1 (= 1.17.0-2),
libxdmcp6 (= 1:1.1.2-3+b1),
libxext6 (= 2:1.3.4-1+b2),
libxft2 (= 2.3.6-1+b1),
libxml2 (= 2.12.7+dfsg+really2.9.14-0.1),
libxrender1 (= 1:0.9.10-1.1+b1),
libxslt1.1 (= 1.1.35-1.1),
libxss1 (= 1:1.2.3-1+b1),
libxxhash0 (= 0.8.2-2+b1),
libzstd1 (= 1.5.6+dfsg-1),
linux-libc-dev (= 6.11.4-1),
m4 (= 1.4.19-4),
make (= 4.3-4.1),
man-db (= 2.13.0-1),
mawk (= 1.3.4.20240905-1),
media-types (= 10.1.0),
ncurses-base (= 6.5-2),
ncurses-bin (= 6.5-2),
netbase (= 6.4),
openssl-provider-legacy (= 3.3.2-1),
patch (= 2.7.6-7),
perl (= 5.40.0-6),
perl-base (= 5.40.0-6),
perl-modules-5.40 (= 5.40.0-6),
pigz (= 2.8-1),
po-debconf (= 1.0.21+nmu1),
python-matplotlib-data (= 3.8.3-3),
python3 (= 3.12.6-1+debusine1),
python3-all (= 3.12.6-1+debusine1),
python3-all-dev (= 3.12.6-1+debusine1),
python3-appdirs (= 1.4.4-4),
python3-attr (= 24.2.0-1),
python3-autocommand (= 2.2.2-3),
python3-brotli (= 1.1.0-2+b4),
python3-contourpy (= 1.3.0-2),
python3-cutadapt (= 4.7-2+bd1),
python3-cycler (= 0.12.1-1),
python3-dateutil (= 2.9.0-3),
python3-decorator (= 5.1.1-5),
python3-dev (= 3.12.6-1+debusine1),
python3-dnaio (= 1.2.2-1),
python3-fonttools (= 4.54.1-4),
python3-fs (= 2.4.16-4),
python3-inflect (= 7.3.1-2),
python3-iniconfig (= 1.1.1-2),
python3-jaraco.context (= 6.0.0-1),
python3-jaraco.functools (= 4.1.0-1),
python3-jaraco.text (= 4.0.0-1),
python3-kiwisolver (= 1.4.7-2),
python3-lxml (= 5.3.0-1),
python3-lz4 (= 4.0.2+dfsg-1+b4),
python3-matplotlib (= 3.8.3-3),
python3-minimal (= 3.12.6-1+debusine1),
python3-more-itertools (= 10.5.0-1),
python3-mpmath (= 1.3.0-1),
python3-numpy (= 1:1.26.4+ds-11),
python3-packaging (= 24.1-1),
python3-pandas (= 2.2.3+dfsg-4),
python3-pandas-lib (= 2.2.3+dfsg-4),
python3-pil (= 10.4.0-1),
python3-pil.imagetk (= 10.4.0-1),
python3-pkg-resources (= 75.2.0-1),
python3-pluggy (= 1.5.0-1),
python3-pyparsing (= 3.1.2-1),
python3-pysam (= 0.22.1+ds-2+debusine1),
python3-pytest (= 8.3.3-1),
python3-scipy (= 1.13.1-5),
python3-seaborn (= 0.13.2-4),
python3-setuptools (= 75.2.0-1),
python3-six (= 1.16.0-7),
python3-sympy (= 1.13.3-1),
python3-tk (= 3.12.6-1),
python3-typeguard (= 4.3.0-1),
python3-typing-extensions (= 4.12.2-2),
python3-tz (= 2024.1-2),
python3-ufolib2 (= 0.16.0+dfsg1-1),
python3-xopen (= 1.7.0-2),
python3-zipp (= 3.20.2-1),
python3.12 (= 3.12.7-1),
python3.12-dev (= 3.12.7-1),
python3.12-minimal (= 3.12.7-1),
python3.12-tk (= 3.12.7-1),
python3.13 (= 3.13.0-1),
python3.13-dev (= 3.13.0-1),
python3.13-minimal (= 3.13.0-1),
python3.13-tk (= 3.13.0-1),
readline-common (= 8.2-5),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-2),
sensible-utils (= 0.0.24),
sysvinit-utils (= 3.11-1),
tar (= 1.35+dfsg-3),
tk8.6-blt2.5 (= 2.5.3+dfsg-7),
tzdata (= 2024b-3),
unicode-data (= 15.1.0-1),
util-linux (= 2.40.2-9),
x11-common (= 1:7.7+23.1),
xz-utils (= 5.6.2-2),
zlib1g (= 1:1.3.dfsg+really1.3.1-1),
zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="C.UTF-8"
LC_COLLATE="C.UTF-8"
LC_CTYPE="C.UTF-8"
SOURCE_DATE_EPOCH="1729787741"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-sqt-dbgsym_0.8.0-8+bd1_arm64.deb
----------------------------------------
new Debian package, version 2.0.
size 786192 bytes: control archive=656 bytes.
444 bytes, 12 lines control
301 bytes, 3 lines md5sums
Package: python3-sqt-dbgsym
Source: python-sqt (0.8.0-8)
Version: 0.8.0-8+bd1
Auto-Built-Package: debug-symbols
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 843
Depends: python3-sqt (= 0.8.0-8+bd1)
Section: debug
Priority: optional
Description: debug symbols for python3-sqt
Build-Ids: 09f0c077255895624c930228ffb574ef13c93065 4a558d09e458df764ad624ce67b80ef117398210
drwxr-xr-x root/root 0 2024-10-24 16:35 ./
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/.build-id/09/
-rw-r--r-- root/root 420832 2024-10-24 16:35 ./usr/lib/debug/.build-id/09/f0c077255895624c930228ffb574ef13c93065.debug
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/.build-id/4a/
-rw-r--r-- root/root 413704 2024-10-24 16:35 ./usr/lib/debug/.build-id/4a/558d09e458df764ad624ce67b80ef117398210.debug
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root 13968 2024-10-24 16:35 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-sqt.debug
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/doc/
lrwxrwxrwx root/root 0 2024-10-24 16:35 ./usr/share/doc/python3-sqt-dbgsym -> python3-sqt
python3-sqt_0.8.0-8+bd1_arm64.deb
---------------------------------
new Debian package, version 2.0.
size 139168 bytes: control archive=3380 bytes.
2229 bytes, 46 lines control
5376 bytes, 63 lines md5sums
269 bytes, 12 lines * postinst #!/bin/sh
382 bytes, 12 lines * prerm #!/bin/sh
Package: python3-sqt
Source: python-sqt (0.8.0-8)
Version: 0.8.0-8+bd1
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 610
Depends: libc6 (>= 2.17), python3 (<< 3.14), python3 (>= 3.12~), python3-cutadapt, python3-matplotlib, python3-pysam, python3-seaborn, python3-xopen, python3:any
Recommends: fonts-noto-color-emoji
Section: python
Priority: optional
Homepage: https://bitbucket.org/marcelm/sqt
Description: SeQuencing Tools for biological DNA/RNA high-throughput data
sqt is a collection of command-line tools for working with
high-throughput sequencing data. Conceptionally not fixed to use any
particular language, many sqt subcommands are currently implemented
in Python. For them, a Python package is available with functions for
reading and writing FASTA/FASTQ files, computing alignments, quality
trimming, etc.
.
The following tools are offered:
* sqt-coverage -- Compute per-reference statistics such as coverage
and GC content
* sqt-fastqmod -- FASTQ modifications: shorten, subset, reverse
complement, quality trimming.
* sqt-fastastats -- Compute N50, min/max length, GC content etc. of
a FASTA file
* sqt-qualityguess -- Guess quality encoding of one or more FASTA files.
* sqt-globalalign -- Compute a global or semiglobal alignment of two strings.
* sqt-chars -- Count length of the first word given on the command line.
* sqt-sam-cscq -- Add the CS and CQ tags to a SAM file with colorspace reads.
* sqt-fastamutate -- Add substitutions and indels to sequences in a
FASTA file.
* sqt-fastaextract -- Efficiently extract one or more regions from an
indexed FASTA file.
* sqt-translate -- Replace characters in FASTA files (like the 'tr'
command).
* sqt-sam-fixn -- Replace all non-ACGT characters within reads in a
SAM file.
* sqt-sam-insertsize -- Mean and standard deviation of paired-end
insert sizes.
* sqt-sam-set-op -- Set operations (union, intersection, ...) on
SAM/BAM files.
* sqt-bam-eof -- Check for the End-Of-File marker in compressed
BAM files.
* sqt-checkfastqpe -- Check whether two FASTQ files contain correctly
paired paired-end data.
drwxr-xr-x root/root 0 2024-10-24 16:35 ./
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/bin/
-rwxr-xr-x root/root 938 2024-10-24 16:35 ./usr/bin/sqt
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/
-rw-r--r-- root/root 701 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/dependency_links.txt
-rw-r--r-- root/root 42 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/entry_points.txt
-rw-r--r-- root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt
-rw-r--r-- root/root 4 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/top_level.txt
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/
-rw-r--r-- root/root 360 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__init__.py
-rw-r--r-- root/root 1401 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/__main__.py
-rw-r--r-- root/root 855 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/_codons.py
-rw-r--r-- root/root 203704 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/_helpers.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root 203704 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/_helpers.cpython-313-aarch64-linux-gnu.so
-rw-r--r-- root/root 471 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/_version.py
-rw-r--r-- root/root 6070 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/align.py
-rw-r--r-- root/root 1980 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/ansicolor.py
-rw-r--r-- root/root 516 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/args.py
-rw-r--r-- root/root 11249 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/cigar.py
-rw-r--r-- root/root 1812 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/colorspace.py
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/commands/
-rw-r--r-- root/root 0 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/__init__.py
-rw-r--r-- root/root 2423 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/addadapt.py
-rw-r--r-- root/root 3535 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/align.py
-rw-r--r-- root/root 4560 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bam2fastq.py
-rw-r--r-- root/root 1389 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bameof.py
-rw-r--r-- root/root 7998 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/bamstats.py
-rw-r--r-- root/root 444 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/chars.py
-rw-r--r-- root/root 2183 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/checkfastqpe.py
-rw-r--r-- root/root 1261 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/checkvcfref.py
-rw-r--r-- root/root 4808 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/compare_sequences.py
-rw-r--r-- root/root 3411 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/coverage.py
-rw-r--r-- root/root 4408 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/cutvect.py
-rw-r--r-- root/root 3170 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastaextract.py
-rw-r--r-- root/root 2277 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastagrep.py
-rw-r--r-- root/root 6023 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastastats.py
-rw-r--r-- root/root 9378 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fastxmod.py
-rw-r--r-- root/root 871 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/fixbam64.py
-rw-r--r-- root/root 1399 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/histogram.py
-rw-r--r-- root/root 1229 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/mutate.py
-rw-r--r-- root/root 1055 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/qgramfreq.py
-rw-r--r-- root/root 1516 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/qualityguess.py
-rw-r--r-- root/root 787 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/randomseq.py
-rw-r--r-- root/root 1830 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/readcov.py
-rw-r--r-- root/root 3897 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/readlenhisto.py
-rw-r--r-- root/root 845 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/samfixn.py
-rw-r--r-- root/root 4892 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/samsetop.py
-rw-r--r-- root/root 2002 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/simreads.py
-rw-r--r-- root/root 1490 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/commands/translate.py
-rw-r--r-- root/root 554 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/compat.py
-rw-r--r-- root/root 3993 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/dna.py
-rw-r--r-- root/root 3914 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/intervaltree.py
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/lib/python3/dist-packages/sqt/io/
-rw-r--r-- root/root 0 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/io/__init__.py
-rw-r--r-- root/root 6573 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/io/bam.py
-rw-r--r-- root/root 25513 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/io/fasta.py
-rw-r--r-- root/root 1818 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/io/gtf.py
-rw-r--r-- root/root 10121 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/io/sff.py
-rw-r--r-- root/root 1550 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/math.py
-rw-r--r-- root/root 494 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/qualtrim.py
-rw-r--r-- root/root 4190 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/reads.py
-rw-r--r-- root/root 2524 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/region.py
-rw-r--r-- root/root 606 2016-12-01 16:12 ./usr/lib/python3/dist-packages/sqt/utils.py
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/doc/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/doc/python3-sqt/
-rw-r--r-- root/root 204 2023-12-05 14:43 ./usr/share/doc/python3-sqt/README.Debian
-rw-r--r-- root/root 223 2024-10-24 16:35 ./usr/share/doc/python3-sqt/changelog.Debian.arm64.gz
-rw-r--r-- root/root 914 2024-10-24 16:35 ./usr/share/doc/python3-sqt/changelog.Debian.gz
-rw-r--r-- root/root 1651 2023-12-05 14:43 ./usr/share/doc/python3-sqt/copyright
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/man/
drwxr-xr-x root/root 0 2024-10-24 16:35 ./usr/share/man/man1/
-rw-r--r-- root/root 887 2024-10-24 16:35 ./usr/share/man/man1/sqt.1.gz
lintian
-------
Setup apt archive
-----------------
Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1420 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1420 B]
Fetched 3455 B in 0s (312 kB/s)
Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:2 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release [609 B]
Get:3 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-F3OjNx/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...
Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-lintian-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-lintian-dummy.
(Reading database ... 35790 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ...
Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: any
Build-Space: 12848
Build-Time: 45
Distribution: sid
Host Architecture: arm64
Install-Time: 93
Job: /tmp/debusine-fetch-exec-upload-qkgtcj1w/python-sqt_0.8.0-8.dsc
Lintian: pass
Machine Architecture: arm64
Package: python-sqt
Package-Time: 178
Source-Version: 0.8.0-8
Space: 12848
Status: successful
Version: 0.8.0-8+bd1
--------------------------------------------------------------------------------
Finished at 2024-10-24T16:36:26Z
Build needed 00:02:58, 12848k disk space