sbuild (Debian sbuild) 0.85.11~bpo12+1 (31 August 2024) on debusine-worker-arm64-demeter-06.freexian.com
+==============================================================================+
| pyfastx 2.1.0-2+bd1 (arm64) Fri, 25 Oct 2024 19:21:45 +0000 |
+==============================================================================+
Package: pyfastx
Version: 2.1.0-2+bd1
Source Version: 2.1.0-2
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: any
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I: NOTICE: Log filtering will replace 'build/pyfastx-ecOQzM/resolver-lPouzG' with '<<RESOLVERDIR>>'
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The following packages will be upgraded:
apt base-passwd coreutils libapt-pkg6.0t64 libhtml-form-perl libkeyutils1
liblz1 liblzma5 libnet-ssleay-perl sysvinit-utils xz-utils
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Local sources
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/tmp/debusine-fetch-exec-upload-mjzdv3lg/pyfastx_2.1.0-2.dsc exists in /tmp/debusine-fetch-exec-upload-mjzdv3lg; copying to chroot
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| Install package build dependencies |
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Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, libsqlite3-dev, zlib1g-dev, python3-all-dev, python3-indexed-gzip, python3-pyfaidx, python3-setuptools, build-essential, fakeroot, dumb-init
Filtered Build-Depends: debhelper-compat (= 13), dh-python, libsqlite3-dev, zlib1g-dev, python3-all-dev, python3-indexed-gzip, python3-pyfaidx, python3-setuptools, build-essential, fakeroot, dumb-init
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
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Install main build dependencies (apt-based resolver)
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Installing build dependencies
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The following additional packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libelf1t64
libexpat1 libexpat1-dev libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libgfortran5 libhwasan0 libisl23 libitm1 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6
libncursesw6 libnsl2 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal
libpython3.13-stdlib libsqlite3-dev libstdc++-14-dev libtirpc-common
libtirpc3t64 libtool libtsan2 libubsan1 linux-libc-dev m4 media-types
po-debconf python3 python3-all python3-all-dev python3-autocommand
python3-dev python3-importlib-metadata python3-indexed-gzip python3-inflect
python3-jaraco.context python3-jaraco.functools python3-jaraco.text
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pkg-resources python3-pyfaidx python3-setuptools python3-typeguard
python3-typing-extensions python3-zipp python3.12 python3.12-dev
python3.12-minimal python3.13 python3.13-dev python3.13-minimal rpcsvc-proto
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc dh-make flit python3-build python3-installer python3-wheel
gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
gdb-aarch64-linux-gnu libc-devtools glibc-doc sqlite3-doc libstdc++-14-doc
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl
python3-doc python3-tk python3-venv gfortran python-numpy-doc python3-pytest
python-setuptools-doc python3.12-venv python3.12-doc binfmt-support
python3.13-venv python3.13-doc
Recommended packages:
manpages manpages-dev libarchive-cpio-perl javascript-common libgpm2
libltdl-dev libmail-sendmail-perl python3-biopython
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-python dh-strip-nondeterminism dumb-init dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libblas3
libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libelf1t64
libexpat1 libexpat1-dev libfakeroot libfile-stripnondeterminism-perl
libgcc-14-dev libgfortran5 libhwasan0 libisl23 libitm1 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6
libncursesw6 libnsl2 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal
libpython3.13-stdlib libsqlite3-dev libstdc++-14-dev libtirpc-common
libtirpc3t64 libtool libtsan2 libubsan1 linux-libc-dev m4 media-types
po-debconf python3 python3-all python3-all-dev python3-autocommand
python3-dev python3-importlib-metadata python3-indexed-gzip python3-inflect
python3-jaraco.context python3-jaraco.functools python3-jaraco.text
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pkg-resources python3-pyfaidx python3-setuptools python3-typeguard
python3-typing-extensions python3-zipp python3.12 python3.12-dev
python3.12-minimal python3.13 python3.13-dev python3.13-minimal rpcsvc-proto
sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded.
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Get:26 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.4-1 [2440 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1 [59.7 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b1 [674 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b2 [50.2 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-7 [9164 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-7 [1280 B]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:39 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:40 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-7 [42.2 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-7 [24.2 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-7 [2578 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-7 [1162 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-7 [2386 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-7 [1040 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-7 [1442 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-7 [2365 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-7 [17.7 MB]
Get:49 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-7 [517 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:51 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:52 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-7 [2265 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-7 [10.1 MB]
Get:54 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-7 [20.0 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:56 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:57 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:58 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-7 [517 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:63 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 python3-importlib-metadata all 8.5.0-1 [21.0 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.3.0-1 [36.5 kB]
Get:73 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:75 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20241024 [109 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 dumb-init arm64 1.2.5-3 [13.4 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-1 [142 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-7 [361 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-3 [158 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libsqlite3-dev arm64 3.46.1-1 [1058 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 python3-packaging all 24.1-1 [45.8 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 python3-pyfaidx all 0.8.1.3-1 [29.1 kB]
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-7 gcc-14_14.2.0-7 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-7 libstdc++6_14.2.0-7 linux-libc-dev_6.11.4-1
Package versions: appstream_1.0.3-1 apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1 cpp_4:14.2.0-1 cpp-14_14.2.0-7 cpp-14-aarch64-linux-gnu_14.2.0-7 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-python_6.20241024 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dumb-init_1.2.5-3 dwz_0.15-1+b1 e2fsprogs_1.47.1-1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-7 g++-14-aarch64-linux-gnu_14.2.0-7 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-7 gcc-14-aarch64-linux-gnu_14.2.0-7 gcc-14-base_14.2.0-7 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python3-pyfaidx_0.8.1.3-1 python3-setuptools_75.2.0-1 python3-typeguard_4.3.0-1 python3-typing-extensions_4.12.2-2 python3-zipp_3.20.2-1 python3.12_3.12.7-1 python3.12-dev_3.12.7-1 python3.12-minimal_3.12.7-1 python3.13_3.13.0-1 python3.13-dev_3.13.0-1 python3.13-minimal_3.13.0-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4 tar_1.35+dfsg-3 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28 util-linux_2.40.2-9 xz-utils_5.6.3-1 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
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Hash: SHA512
Format: 3.0 (quilt)
Source: pyfastx
Binary: pyfastx, python3-pyfastx
Architecture: any
Version: 2.1.0-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Étienne Mollier <emollier@debian.org>
Homepage: https://github.com/lmdu/pyfastx
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/pyfastx
Vcs-Git: https://salsa.debian.org/med-team/pyfastx.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all
Build-Depends: debhelper-compat (= 13), dh-python, libsqlite3-dev, zlib1g-dev, python3-all-dev, python3-indexed-gzip, python3-pyfaidx <!nocheck>, python3-setuptools
Package-List:
pyfastx deb science optional arch=any
python3-pyfastx deb python optional arch=any
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7bd60ea3fa2936412a8e16c887ba986f 7412 pyfastx_2.1.0-2.debian.tar.xz
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gpgv: Signature made Fri Aug 30 18:49:12 2024 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./pyfastx_2.1.0-2.dsc: no acceptable signature found
dpkg-source: info: extracting pyfastx in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking pyfastx_2.1.0.orig.tar.xz
dpkg-source: info: unpacking pyfastx_2.1.0-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0001-t-test_sequence.py.patch
dpkg-source: info: applying use_debian_packaged_indexed-gzip.patch
dpkg-source: info: applying use_debian_packaged_zlib.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.1.0-2+bd1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
OLDPWD=/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mDebusine Rebuild <debusine@example.net> -B -rfakeroot
dpkg-buildpackage: info: source package pyfastx
dpkg-buildpackage: info: source version 2.1.0-2+bd1
dpkg-buildpackage: info: source distribution sid
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
debian/rules clean
dh clean --buildsystem pybuild --with python3
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py clean
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
I: pybuild base:311: python3.12 setup.py clean
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build' (and everything under it)
'build/bdist.linux-aarch64' does not exist -- can't clean it
'build/scripts-3.12' does not exist -- can't clean it
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --buildsystem pybuild --with python3
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running config
I: pybuild base:311: python3.12 setup.py config
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running config
debian/rules execute_before_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Upstream originally vendored these files straight in src/, but
# stopped for some reason. We're pulling them instead from the
# package python3-indexed-gzip.
cp --update=none /usr/lib/python3/dist-packages/indexed_gzip/zran.c src/
cp --update=none /usr/lib/python3/dist-packages/indexed_gzip/zran.h src/
cp --update=none /usr/lib/python3/dist-packages/indexed_gzip/zran_file_util.c src/
cp --update=none /usr/lib/python3/dist-packages/indexed_gzip/zran_file_util.h src/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py build
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running build
running build_py
copying pyfastxcli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build
running build_ext
building 'pyfastx' extension
creating build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/fakeys.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fakeys.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/fasta.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fasta.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/fasta.c: In function ‘pyfastx_fasta_fetch’:
/<<PKGBUILDDIR>>/src/fasta.c:443:34: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
443 | if (strlen(name) >= self->index->cache_name.m) {
| ^~
/<<PKGBUILDDIR>>/src/fasta.c: In function ‘pyfastx_fasta_composition’:
/<<PKGBUILDDIR>>/src/fasta.c:1058:13: warning: unused variable ‘i’ [-Wunused-variable]
1058 | int i;
| ^
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/fastq.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fastq.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/fastx.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fastx.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/fqkeys.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fqkeys.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/index.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/index.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/kseq.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/kseq.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/module.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/module.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/module.c: In function ‘pyfastx_reverse_complement’:
/<<PKGBUILDDIR>>/src/module.c:57:32: warning: passing argument 1 of ‘reverse_complement_seq’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
57 | reverse_complement_seq(s);
| ^
In file included from /<<PKGBUILDDIR>>/src/fastq.h:8,
from /<<PKGBUILDDIR>>/src/module.c:3:
/<<PKGBUILDDIR>>/src/util.h:16:35: note: expected ‘char *’ but argument is of type ‘const char *’
16 | void reverse_complement_seq(char *seq);
| ~~~~~~^~~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/read.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/read.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/sequence.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/sequence.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/sequence.c: In function ‘pyfastx_sequence_get_fullseq’:
/<<PKGBUILDDIR>>/src/sequence.c:90:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
90 | if (strlen(self->name) >= self->index->cache_name.m) {
| ^~
/<<PKGBUILDDIR>>/src/sequence.c: In function ‘pyfastx_sequence_subscript’:
/<<PKGBUILDDIR>>/src/sequence.c:431:20: warning: variable ‘slice_len’ set but not used [-Wunused-but-set-variable]
431 | Py_ssize_t slice_len;
| ^~~~~~~~~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/util.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/util.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/zran.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/zran.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c /<<PKGBUILDDIR>>/src/zran_file_util.c -o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/zran_file_util.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fakeys.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fasta.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fastq.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fastx.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/fqkeys.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/index.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/kseq.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/module.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/read.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/sequence.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/util.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/zran.o build/temp.linux-aarch64-cpython-313/<<PKGBUILDDIR>>/src/zran_file_util.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/pyfastx.cpython-313-aarch64-linux-gnu.so -lsqlite3
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running build
running build_py
copying pyfastxcli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build
running build_ext
building 'pyfastx' extension
creating build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/fakeys.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fakeys.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/fasta.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fasta.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/fasta.c: In function ‘pyfastx_fasta_fetch’:
/<<PKGBUILDDIR>>/src/fasta.c:443:34: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
443 | if (strlen(name) >= self->index->cache_name.m) {
| ^~
/<<PKGBUILDDIR>>/src/fasta.c: In function ‘pyfastx_fasta_composition’:
/<<PKGBUILDDIR>>/src/fasta.c:1058:13: warning: unused variable ‘i’ [-Wunused-variable]
1058 | int i;
| ^
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/fastq.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fastq.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/fastx.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fastx.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/fqkeys.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fqkeys.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/index.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/index.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/kseq.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/kseq.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/module.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/module.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/module.c: In function ‘pyfastx_reverse_complement’:
/<<PKGBUILDDIR>>/src/module.c:57:32: warning: passing argument 1 of ‘reverse_complement_seq’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
57 | reverse_complement_seq(s);
| ^
In file included from /<<PKGBUILDDIR>>/src/fastq.h:8,
from /<<PKGBUILDDIR>>/src/module.c:3:
/<<PKGBUILDDIR>>/src/util.h:16:35: note: expected ‘char *’ but argument is of type ‘const char *’
16 | void reverse_complement_seq(char *seq);
| ~~~~~~^~~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/read.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/read.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/sequence.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/sequence.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
/<<PKGBUILDDIR>>/src/sequence.c: In function ‘pyfastx_sequence_get_fullseq’:
/<<PKGBUILDDIR>>/src/sequence.c:90:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
90 | if (strlen(self->name) >= self->index->cache_name.m) {
| ^~
/<<PKGBUILDDIR>>/src/sequence.c: In function ‘pyfastx_sequence_subscript’:
/<<PKGBUILDDIR>>/src/sequence.c:431:20: warning: variable ‘slice_len’ set but not used [-Wunused-but-set-variable]
431 | Py_ssize_t slice_len;
| ^~~~~~~~~
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/util.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/util.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/zran.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/zran.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c /<<PKGBUILDDIR>>/src/zran_file_util.c -o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/zran_file_util.o -Wno-unused-result -D_FILE_OFFSET_BITS=64 -D_LFS64_LARGEFILE -D_LARGEFILE64_SOURCE
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fakeys.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fasta.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fastq.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fastx.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/fqkeys.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/index.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/kseq.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/module.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/read.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/sequence.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/util.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/zran.o build/temp.linux-aarch64-cpython-312/<<PKGBUILDDIR>>/src/zran_file_util.o -L/usr/lib/aarch64-linux-gnu -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/pyfastx.cpython-312-aarch64-linux-gnu.so -lsqlite3
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild pybuild:308: mkdir -pv /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src && cp -v src/version.h /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src
mkdir: created directory '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src'
'src/version.h' -> '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src/version.h'
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build; python3.13 -m unittest discover -v
test_id_exception (tests.test_fakeys.IdentifierTest.test_id_exception) ... ok
test_key_identifier (tests.test_fakeys.IdentifierTest.test_key_identifier) ... ok
test_key_repr (tests.test_fakeys.IdentifierTest.test_key_repr) ... ok
test_key_slice (tests.test_fakeys.IdentifierTest.test_key_slice) ... ok
test_keys_filter (tests.test_fakeys.IdentifierTest.test_keys_filter) ... ok
test_keys_sort (tests.test_fakeys.IdentifierTest.test_keys_sort) ... ok
test_build (tests.test_fasta.FastaTest.test_build) ... ok
test_exception (tests.test_fasta.FastaTest.test_exception) ... ok
test_fasta (tests.test_fasta.FastaTest.test_fasta) ... ok
test_iter_full_name (tests.test_fasta.FastaTest.test_iter_full_name) ... ok
test_iter_object (tests.test_fasta.FastaTest.test_iter_object) ... ok
test_iter_tuple (tests.test_fasta.FastaTest.test_iter_tuple) ... ok
test_iter_upper (tests.test_fasta.FastaTest.test_iter_upper) ... ok
test_iter_upper_full_name (tests.test_fasta.FastaTest.test_iter_upper_full_name) ... ok
test_key_func (tests.test_fasta.FastaTest.test_key_func) ... ok
test_module (tests.test_fasta.FastaTest.test_module) ... ok
test_no_upper (tests.test_fasta.FastaTest.test_no_upper) ... ok
test_repr (tests.test_fasta.FastaTest.test_repr) ... ok
test_seq_fetch (tests.test_fasta.FastaTest.test_seq_fetch) ... ok
test_seq_flank (tests.test_fasta.FastaTest.test_seq_flank) ... ok
test_seq_type (tests.test_fasta.FastaTest.test_seq_type) ... ok
test_statistics (tests.test_fasta.FastaTest.test_statistics) ... ok
test_build (tests.test_fastq.FastqTest.test_build) ... ok
test_exception (tests.test_fastq.FastqTest.test_exception) ... ok
test_fastq (tests.test_fastq.FastqTest.test_fastq) ... ok
test_full_name (tests.test_fastq.FastqTest.test_full_name) ... ok
test_iter_object (tests.test_fastq.FastqTest.test_iter_object) ... ok
test_iter_tuple (tests.test_fastq.FastqTest.test_iter_tuple) ... ok
test_negative (tests.test_fastq.FastqTest.test_negative) ... ok
test_platform (tests.test_fastq.FastqTest.test_platform) ... ok
test_read_len (tests.test_fastq.FastqTest.test_read_len) ... ok
test_repr (tests.test_fastq.FastqTest.test_repr) ... ok
test_exception (tests.test_fastx.FastxTest.test_exception) ... ok
test_fasta_iter (tests.test_fastx.FastxTest.test_fasta_iter) ... ok
test_fasta_upper (tests.test_fastx.FastxTest.test_fasta_upper) ... ok
test_fastq_iter (tests.test_fastx.FastxTest.test_fastq_iter) ... ok
test_fastx_repr (tests.test_fastx.FastxTest.test_fastx_repr) ... ok
test_exception (tests.test_fqkeys.FastxTest.test_exception) ... ok
test_fastq_key (tests.test_fqkeys.FastxTest.test_fastq_key) ... ok
test_read (tests.test_read.ReadTest.test_read) ... ok
test_read_description (tests.test_read.ReadTest.test_read_description) ... ok
test_read_raw (tests.test_read.ReadTest.test_read_raw) ... ok
test_read_seq (tests.test_read.ReadTest.test_read_seq) ... ok
test_repr (tests.test_read.ReadTest.test_repr) ... ok
test_full_compo (tests.test_sequence.SequenceTest.test_full_compo) ... ok
test_seq_by_index (tests.test_sequence.SequenceTest.test_seq_by_index) ... ok
test_seq_by_key (tests.test_sequence.SequenceTest.test_seq_by_key) ... ok
test_seq_content (tests.test_sequence.SequenceTest.test_seq_content) ... ok
test_seq_exception (tests.test_sequence.SequenceTest.test_seq_exception) ... ok
test_seq_iter (tests.test_sequence.SequenceTest.test_seq_iter) ... ok
test_seq_raw (tests.test_sequence.SequenceTest.test_seq_raw) ... ok
test_seq_repr (tests.test_sequence.SequenceTest.test_seq_repr) ... ok
test_seq_reverse_complement (tests.test_sequence.SequenceTest.test_seq_reverse_complement) ... ok
test_seq_slice (tests.test_sequence.SequenceTest.test_seq_slice) ... ok
test_seq_by_index (tests.test_sequence_error.SequenceErrorTest.test_seq_by_index) ... ok
test_seq_by_key (tests.test_sequence_error.SequenceErrorTest.test_seq_by_key) ... ok
----------------------------------------------------------------------
Ran 56 tests in 2.955s
OK
pyfastx: 2.1.0; zlib: 1.3.1; sqlite: 3.46.1; zran: 1.7.0
I: pybuild pybuild:334: rm -rvf /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/non.fa
removed '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src/version.h'
removed directory '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/src'
removed '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/non.fa'
I: pybuild pybuild:308: mkdir -pv /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src && cp -v src/version.h /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src
mkdir: created directory '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src'
'src/version.h' -> '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src/version.h'
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build; python3.12 -m unittest discover -v
test_id_exception (tests.test_fakeys.IdentifierTest.test_id_exception) ... ok
test_key_identifier (tests.test_fakeys.IdentifierTest.test_key_identifier) ... ok
test_key_repr (tests.test_fakeys.IdentifierTest.test_key_repr) ... ok
test_key_slice (tests.test_fakeys.IdentifierTest.test_key_slice) ... ok
test_keys_filter (tests.test_fakeys.IdentifierTest.test_keys_filter) ... ok
test_keys_sort (tests.test_fakeys.IdentifierTest.test_keys_sort) ... ok
test_build (tests.test_fasta.FastaTest.test_build) ... ok
test_exception (tests.test_fasta.FastaTest.test_exception) ... ok
test_fasta (tests.test_fasta.FastaTest.test_fasta) ... ok
test_iter_full_name (tests.test_fasta.FastaTest.test_iter_full_name) ... ok
test_iter_object (tests.test_fasta.FastaTest.test_iter_object) ... ok
test_iter_tuple (tests.test_fasta.FastaTest.test_iter_tuple) ... ok
test_iter_upper (tests.test_fasta.FastaTest.test_iter_upper) ... ok
test_iter_upper_full_name (tests.test_fasta.FastaTest.test_iter_upper_full_name) ... ok
test_key_func (tests.test_fasta.FastaTest.test_key_func) ... ok
test_module (tests.test_fasta.FastaTest.test_module) ... ok
test_no_upper (tests.test_fasta.FastaTest.test_no_upper) ... ok
test_repr (tests.test_fasta.FastaTest.test_repr) ... ok
test_seq_fetch (tests.test_fasta.FastaTest.test_seq_fetch) ... ok
test_seq_flank (tests.test_fasta.FastaTest.test_seq_flank) ... ok
test_seq_type (tests.test_fasta.FastaTest.test_seq_type) ... ok
test_statistics (tests.test_fasta.FastaTest.test_statistics) ... ok
test_build (tests.test_fastq.FastqTest.test_build) ... ok
test_exception (tests.test_fastq.FastqTest.test_exception) ... ok
test_fastq (tests.test_fastq.FastqTest.test_fastq) ... ok
test_full_name (tests.test_fastq.FastqTest.test_full_name) ... ok
test_iter_object (tests.test_fastq.FastqTest.test_iter_object) ... ok
test_iter_tuple (tests.test_fastq.FastqTest.test_iter_tuple) ... ok
test_negative (tests.test_fastq.FastqTest.test_negative) ... ok
test_platform (tests.test_fastq.FastqTest.test_platform) ... ok
test_read_len (tests.test_fastq.FastqTest.test_read_len) ... ok
test_repr (tests.test_fastq.FastqTest.test_repr) ... ok
test_exception (tests.test_fastx.FastxTest.test_exception) ... ok
test_fasta_iter (tests.test_fastx.FastxTest.test_fasta_iter) ... ok
test_fasta_upper (tests.test_fastx.FastxTest.test_fasta_upper) ... ok
test_fastq_iter (tests.test_fastx.FastxTest.test_fastq_iter) ... ok
test_fastx_repr (tests.test_fastx.FastxTest.test_fastx_repr) ... ok
test_exception (tests.test_fqkeys.FastxTest.test_exception) ... ok
test_fastq_key (tests.test_fqkeys.FastxTest.test_fastq_key) ... ok
test_read (tests.test_read.ReadTest.test_read) ... ok
test_read_description (tests.test_read.ReadTest.test_read_description) ... ok
test_read_raw (tests.test_read.ReadTest.test_read_raw) ... ok
test_read_seq (tests.test_read.ReadTest.test_read_seq) ... ok
test_repr (tests.test_read.ReadTest.test_repr) ... ok
test_full_compo (tests.test_sequence.SequenceTest.test_full_compo) ... ok
test_seq_by_index (tests.test_sequence.SequenceTest.test_seq_by_index) ... ok
test_seq_by_key (tests.test_sequence.SequenceTest.test_seq_by_key) ... ok
test_seq_content (tests.test_sequence.SequenceTest.test_seq_content) ... ok
test_seq_exception (tests.test_sequence.SequenceTest.test_seq_exception) ... ok
test_seq_iter (tests.test_sequence.SequenceTest.test_seq_iter) ... ok
test_seq_raw (tests.test_sequence.SequenceTest.test_seq_raw) ... ok
test_seq_repr (tests.test_sequence.SequenceTest.test_seq_repr) ... ok
test_seq_reverse_complement (tests.test_sequence.SequenceTest.test_seq_reverse_complement) ... ok
test_seq_slice (tests.test_sequence.SequenceTest.test_seq_slice) ... ok
test_seq_by_index (tests.test_sequence_error.SequenceErrorTest.test_seq_by_index) ... ok
test_seq_by_key (tests.test_sequence_error.SequenceErrorTest.test_seq_by_key) ... ok
----------------------------------------------------------------------
Ran 56 tests in 2.903s
OK
pyfastx: 2.1.0; zlib: 1.3.1; sqlite: 3.46.1; zran: 1.7.0
I: pybuild pybuild:334: rm -rvf /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/non.fa
removed '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src/version.h'
removed directory '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/src'
removed '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/non.fa'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /<<PKGBUILDDIR>>/debian/tmp
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.13/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/pyfastxcli.py -> /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.13/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/pyfastx.cpython-313-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.13/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.13/dist-packages/pyfastxcli.py to pyfastxcli.cpython-313.pyc
running install_egg_info
running egg_info
creating pyfastx.egg-info
writing pyfastx.egg-info/PKG-INFO
writing dependency_links to pyfastx.egg-info/dependency_links.txt
writing entry points to pyfastx.egg-info/entry_points.txt
writing top-level names to pyfastx.egg-info/top_level.txt
writing manifest file 'pyfastx.egg-info/SOURCES.txt'
reading manifest file 'pyfastx.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'pyfastx.egg-info/SOURCES.txt'
Copying pyfastx.egg-info to /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.13/dist-packages/pyfastx-2.1.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing pyfastx script to /<<PKGBUILDDIR>>/debian/tmp/usr/bin
I: pybuild base:311: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/tmp
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'test_suite'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.12/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/pyfastxcli.py -> /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.12/dist-packages
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/pyfastx.cpython-312-aarch64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.12/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.12/dist-packages/pyfastxcli.py to pyfastxcli.cpython-312.pyc
running install_egg_info
running egg_info
writing pyfastx.egg-info/PKG-INFO
writing dependency_links to pyfastx.egg-info/dependency_links.txt
writing entry points to pyfastx.egg-info/entry_points.txt
writing top-level names to pyfastx.egg-info/top_level.txt
reading manifest file 'pyfastx.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'pyfastx.egg-info/SOURCES.txt'
Copying pyfastx.egg-info to /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.12/dist-packages/pyfastx-2.1.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing pyfastx script to /<<PKGBUILDDIR>>/debian/tmp/usr/bin
dh_install -a -O--buildsystem=pybuild
dh_installdocs -a -O--buildsystem=pybuild
debian/rules execute_after_dh_installdocs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Deduplicate changelog entries flagged by lintian.
rm debian/pyfastx/usr/share/doc/pyfastx/docs/changelog.rst*
cd debian/pyfastx/usr/share/doc/pyfastx/docs \
&& ln -s ../changelog.gz changelog.rst.gz
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installexamples -a -O--buildsystem=pybuild
debian/rules execute_after_dh_installexamples
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Remove duplicate uncompressed files caused by the nature of the test;
# we can get them back during the CLI test.
rm debian/pyfastx/usr/share/doc/pyfastx/examples/test.fa
rm debian/pyfastx/usr/share/doc/pyfastx/examples/test.fq
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: Depends field of package pyfastx: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package python3-pyfastx: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package python3-pyfastx: substitution variable ${python3:Depends} unused, but is defined
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'pyfastx' in '../pyfastx_2.1.0-2+bd1_arm64.deb'.
dpkg-deb: building package 'python3-pyfastx' in '../python3-pyfastx_2.1.0-2+bd1_arm64.deb'.
dpkg-deb: building package 'python3-pyfastx-dbgsym' in '../python3-pyfastx-dbgsym_2.1.0-2+bd1_arm64.deb'.
dpkg-genbuildinfo --build=any -O../pyfastx_2.1.0-2+bd1_arm64.buildinfo
dpkg-genchanges --build=any -mDebusine Rebuild <debusine@example.net> -O../pyfastx_2.1.0-2+bd1_arm64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-10-25T19:23:34Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
pyfastx_2.1.0-2+bd1_arm64.changes:
----------------------------------
Format: 1.8
Date: Fri, 25 Oct 2024 19:23:02 +0000
Source: pyfastx (2.1.0-2)
Binary: pyfastx python3-pyfastx python3-pyfastx-dbgsym
Binary-Only: yes
Architecture: arm64
Version: 2.1.0-2+bd1
Distribution: sid
Urgency: low
Maintainer: Debusine Rebuild <debusine@example.net>
Changed-By: Debusine Rebuild <debusine@example.net>
Description:
pyfastx - fast random access to sequences from FASTA/Q file - command
python3-pyfastx - fast random access to sequences from FASTA/Q file - python3 modul
Changes:
pyfastx (2.1.0-2+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
Checksums-Sha1:
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Checksums-Sha256:
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Files:
319837816c215561125f01a48e9d61b7 7540 science optional pyfastx_2.1.0-2+bd1_arm64.buildinfo
b50e537336121c3e050e1936bf85f988 127440 science optional pyfastx_2.1.0-2+bd1_arm64.deb
d7ab50b714cb8f4fb8041dfc31eabc27 235432 debug optional python3-pyfastx-dbgsym_2.1.0-2+bd1_arm64.deb
dcb232805b4571d3d9f53e319ea1cd9d 61272 python optional python3-pyfastx_2.1.0-2+bd1_arm64.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: pyfastx (2.1.0-2)
Binary: pyfastx python3-pyfastx python3-pyfastx-dbgsym
Architecture: arm64
Version: 2.1.0-2+bd1
Binary-Only-Changes:
pyfastx (2.1.0-2+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
.
-- Debusine Rebuild <debusine@example.net> Fri, 25 Oct 2024 19:23:02 +0000
Checksums-Md5:
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Fri, 25 Oct 2024 19:23:34 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
autoconf (= 2.72-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.22.5-2),
autotools-dev (= 20220109.1),
base-files (= 13.5),
base-passwd (= 3.6.5),
bash (= 5.2.32-1+b2),
binutils (= 2.43.1-5),
binutils-aarch64-linux-gnu (= 2.43.1-5),
binutils-common (= 2.43.1-5),
bsdextrautils (= 2.40.2-9),
bsdutils (= 1:2.40.2-9),
build-essential (= 12.12),
bzip2 (= 1.0.8-6),
coreutils (= 9.5-1),
cpp (= 4:14.2.0-1),
cpp-14 (= 14.2.0-7),
cpp-14-aarch64-linux-gnu (= 14.2.0-7),
cpp-aarch64-linux-gnu (= 4:14.2.0-1),
dash (= 0.5.12-9),
debconf (= 1.5.87),
debhelper (= 13.20),
debianutils (= 5.20),
dh-autoreconf (= 20),
dh-python (= 6.20241024),
dh-strip-nondeterminism (= 1.14.0-1),
diffutils (= 1:3.10-1),
dpkg (= 1.22.11),
dpkg-dev (= 1.22.11),
dwz (= 0.15-1+b1),
file (= 1:5.45-3),
findutils (= 4.10.0-3),
g++ (= 4:14.2.0-1),
g++-14 (= 14.2.0-7),
g++-14-aarch64-linux-gnu (= 14.2.0-7),
g++-aarch64-linux-gnu (= 4:14.2.0-1),
gcc (= 4:14.2.0-1),
gcc-14 (= 14.2.0-7),
gcc-14-aarch64-linux-gnu (= 14.2.0-7),
gcc-14-base (= 14.2.0-7),
gcc-aarch64-linux-gnu (= 4:14.2.0-1),
gettext (= 0.22.5-2),
gettext-base (= 0.22.5-2),
grep (= 3.11-4),
groff-base (= 1.23.0-5),
gzip (= 1.12-1.1),
hostname (= 3.25),
init-system-helpers (= 1.67),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.2-2),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 14.2.0-7),
libatomic1 (= 14.2.0-7),
libattr1 (= 1:2.5.2-2),
libaudit-common (= 1:4.0.1-1),
libaudit1 (= 1:4.0.1-1),
libbinutils (= 2.43.1-5),
libblas3 (= 3.12.0-3),
libblkid1 (= 2.40.2-9),
libbz2-1.0 (= 1.0.8-6),
libc-bin (= 2.40-3),
libc-dev-bin (= 2.40-3),
libc6 (= 2.40-3),
libc6-dev (= 2.40-3),
libcap-ng0 (= 0.8.5-3),
libcap2 (= 1:2.66-5),
libcc1-0 (= 14.2.0-7),
libcom-err2 (= 1.47.1-1),
libcrypt-dev (= 1:4.4.36-5),
libcrypt1 (= 1:4.4.36-5),
libctf-nobfd0 (= 2.43.1-5),
libctf0 (= 2.43.1-5),
libdb5.3t64 (= 5.3.28+dfsg2-9),
libdebconfclient0 (= 0.272),
libdebhelper-perl (= 13.20),
libdpkg-perl (= 1.22.11),
libelf1t64 (= 0.192-4),
libexpat1 (= 2.6.3-1),
libexpat1-dev (= 2.6.3-1),
libffi8 (= 3.4.6-1),
libfile-stripnondeterminism-perl (= 1.14.0-1),
libgcc-14-dev (= 14.2.0-7),
libgcc-s1 (= 14.2.0-7),
libgdbm-compat4t64 (= 1.24-2),
libgdbm6t64 (= 1.24-2),
libgfortran5 (= 14.2.0-7),
libgmp10 (= 2:6.3.0+dfsg-2+b1),
libgomp1 (= 14.2.0-7),
libgprofng0 (= 2.43.1-5),
libgssapi-krb5-2 (= 1.21.3-3),
libhwasan0 (= 14.2.0-7),
libicu72 (= 72.1-5),
libisl23 (= 0.27-1),
libitm1 (= 14.2.0-7),
libjansson4 (= 2.14-2+b2),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-sphinxdoc (= 7.4.7-3),
libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
libk5crypto3 (= 1.21.3-3),
libkeyutils1 (= 1.6.3-4),
libkrb5-3 (= 1.21.3-3),
libkrb5support0 (= 1.21.3-3),
liblapack3 (= 3.12.0-3),
liblsan0 (= 14.2.0-7),
liblzma5 (= 5.6.3-1),
libmagic-mgc (= 1:5.45-3),
libmagic1t64 (= 1:5.45-3),
libmd0 (= 1.1.0-2),
libmount1 (= 2.40.2-9),
libmpc3 (= 1.3.1-1+b2),
libmpfr6 (= 4.2.1-1+b1),
libncursesw6 (= 6.5-2),
libnsl2 (= 1.3.0-3+b2),
libpam-modules (= 1.5.3-7),
libpam-modules-bin (= 1.5.3-7),
libpam-runtime (= 1.5.3-7),
libpam0g (= 1.5.3-7),
libpcre2-8-0 (= 10.42-4+b1),
libperl5.40 (= 5.40.0-6),
libpipeline1 (= 1.5.8-1),
libpython3-all-dev (= 3.12.6-1+debusine1),
libpython3-dev (= 3.12.6-1+debusine1),
libpython3-stdlib (= 3.12.6-1+debusine1),
libpython3.12-dev (= 3.12.7-1),
libpython3.12-minimal (= 3.12.7-1),
libpython3.12-stdlib (= 3.12.7-1),
libpython3.12t64 (= 3.12.7-1),
libpython3.13 (= 3.13.0-1),
libpython3.13-dev (= 3.13.0-1),
libpython3.13-minimal (= 3.13.0-1),
libpython3.13-stdlib (= 3.13.0-1),
libreadline8t64 (= 8.2-5),
libseccomp2 (= 2.5.5-1+b1),
libselinux1 (= 3.7-3),
libsframe1 (= 2.43.1-5),
libsmartcols1 (= 2.40.2-9),
libsqlite3-0 (= 3.46.1-1),
libsqlite3-dev (= 3.46.1-1),
libssl3t64 (= 3.3.2-1),
libstdc++-14-dev (= 14.2.0-7),
libstdc++6 (= 14.2.0-7),
libsystemd0 (= 256.7-2),
libtinfo6 (= 6.5-2),
libtirpc-common (= 1.3.4+ds-1.3),
libtirpc3t64 (= 1.3.4+ds-1.3),
libtool (= 2.4.7-7),
libtsan2 (= 14.2.0-7),
libubsan1 (= 14.2.0-7),
libuchardet0 (= 0.0.8-1+b1),
libudev1 (= 256.7-2),
libunistring5 (= 1.2-1),
libuuid1 (= 2.40.2-9),
libxml2 (= 2.12.7+dfsg+really2.9.14-0.1),
libzstd1 (= 1.5.6+dfsg-1),
linux-libc-dev (= 6.11.4-1),
m4 (= 1.4.19-4),
make (= 4.3-4.1),
man-db (= 2.13.0-1),
mawk (= 1.3.4.20240905-1),
media-types (= 10.1.0),
ncurses-base (= 6.5-2),
ncurses-bin (= 6.5-2),
netbase (= 6.4),
openssl-provider-legacy (= 3.3.2-1),
patch (= 2.7.6-7),
perl (= 5.40.0-6),
perl-base (= 5.40.0-6),
perl-modules-5.40 (= 5.40.0-6),
po-debconf (= 1.0.21+nmu1),
python3 (= 3.12.6-1+debusine1),
python3-all (= 3.12.6-1+debusine1),
python3-all-dev (= 3.12.6-1+debusine1),
python3-autocommand (= 2.2.2-3),
python3-dev (= 3.12.6-1+debusine1),
python3-importlib-metadata (= 8.5.0-1),
python3-indexed-gzip (= 1.8.7-3+bd1),
python3-inflect (= 7.3.1-2),
python3-jaraco.context (= 6.0.0-1),
python3-jaraco.functools (= 4.1.0-1),
python3-jaraco.text (= 4.0.0-1),
python3-minimal (= 3.12.6-1+debusine1),
python3-more-itertools (= 10.5.0-1),
python3-numpy (= 1:1.26.4+ds-11),
python3-packaging (= 24.1-1),
python3-pkg-resources (= 75.2.0-1),
python3-pyfaidx (= 0.8.1.3-1),
python3-setuptools (= 75.2.0-1),
python3-typeguard (= 4.3.0-1),
python3-typing-extensions (= 4.12.2-2),
python3-zipp (= 3.20.2-1),
python3.12 (= 3.12.7-1),
python3.12-dev (= 3.12.7-1),
python3.12-minimal (= 3.12.7-1),
python3.13 (= 3.13.0-1),
python3.13-dev (= 3.13.0-1),
python3.13-minimal (= 3.13.0-1),
readline-common (= 8.2-5),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-2),
sensible-utils (= 0.0.24),
sysvinit-utils (= 3.11-1),
tar (= 1.35+dfsg-3),
tzdata (= 2024b-3),
util-linux (= 2.40.2-9),
xz-utils (= 5.6.3-1),
zlib1g (= 1:1.3.dfsg+really1.3.1-1),
zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
DEB_BUILD_OPTIONS="parallel=8"
LANG="C.UTF-8"
LC_COLLATE="C.UTF-8"
LC_CTYPE="C.UTF-8"
SOURCE_DATE_EPOCH="1729884182"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
pyfastx_2.1.0-2+bd1_arm64.deb
-----------------------------
new Debian package, version 2.0.
size 127440 bytes: control archive=1812 bytes.
1620 bytes, 34 lines control
1892 bytes, 26 lines md5sums
Package: pyfastx
Source: pyfastx (2.1.0-2)
Version: 2.1.0-2+bd1
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 169
Depends: python3, python3-pyfastx
Section: science
Priority: optional
Homepage: https://github.com/lmdu/pyfastx
Description: fast random access to sequences from FASTA/Q file - command
The pyfastx is a lightweight Python C extension that enables users to randomly
access to sequences from plain and gzipped FASTA/Q files. This module aims to
provide simple APIs for users to extract sequence from FASTA and reads from
FASTQ by identifier and index number. The pyfastx will build indexes stored in
a sqlite3 database file for random access to avoid consuming excessive amount
of memory. In addition, the pyfastx can parse standard (sequence is spread
into multiple lines with same length) and nonstandard (sequence is spread into
one or more lines with different length) FASTA format.
.
It features:
.
* a single file for the Python extension;
* lightweight, memory efficient FASTA/Q file parsing;
* fast random access to sequences from gzipped FASTA/Q file;
* sequences reading from FASTA file line by line;
* N50 and L50 calculation of sequences in FASTA file;
* GC content and nucleotides composition calculation;
* reverse, complement and antisense sequences extraction;
* excellent compatibility: support for parsing nonstandard FASTA file;
* support for FASTQ quality score conversion;
* a command line interface for splitting FASTA/Q file.
.
This package provides the command line interface.
drwxr-xr-x root/root 0 2024-10-25 19:23 ./
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/bin/
-rwxr-xr-x root/root 958 2024-10-25 19:23 ./usr/bin/pyfastx
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/python3/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/python3/dist-packages/
-rw-r--r-- root/root 13741 2024-02-28 11:39 ./usr/lib/python3/dist-packages/pyfastxcli.py
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/pyfastx/
-rw-r--r-- root/root 7421 2024-02-28 11:39 ./usr/share/doc/pyfastx/README.rst.gz
-rw-r--r-- root/root 273 2024-08-30 18:31 ./usr/share/doc/pyfastx/README.test
-rw-r--r-- root/root 221 2024-10-25 19:23 ./usr/share/doc/pyfastx/changelog.Debian.arm64.gz
-rw-r--r-- root/root 997 2024-10-25 19:23 ./usr/share/doc/pyfastx/changelog.Debian.gz
-rw-r--r-- root/root 3849 2024-02-28 11:39 ./usr/share/doc/pyfastx/changelog.gz
-rw-r--r-- root/root 1433 2024-08-30 18:31 ./usr/share/doc/pyfastx/copyright
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/pyfastx/docs/
-rw-r--r-- root/root 634 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/Makefile
-rw-r--r-- root/root 408 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/acknowledgements.rst
-rw-r--r-- root/root 1338 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/advance.rst
-rw-r--r-- root/root 3184 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/api_reference.rst.gz
lrwxrwxrwx root/root 0 2024-10-25 19:23 ./usr/share/doc/pyfastx/docs/changelog.rst.gz -> ../changelog.gz
-rw-r--r-- root/root 1771 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/commandline.rst.gz
-rw-r--r-- root/root 1152 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/conf.py
-rw-r--r-- root/root 774 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/drawbacks.rst
-rw-r--r-- root/root 3934 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/index.rst
-rw-r--r-- root/root 1207 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/installation.rst
-rw-r--r-- root/root 765 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/make.bat
-rw-r--r-- root/root 37 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/requirements.txt
-rw-r--r-- root/root 4807 2024-02-28 11:39 ./usr/share/doc/pyfastx/docs/usage.rst.gz
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/pyfastx/examples/
-rw-r--r-- root/root 2804 2024-02-28 11:39 ./usr/share/doc/pyfastx/examples/protein.fa
-rw-r--r-- root/root 764 2024-02-28 11:39 ./usr/share/doc/pyfastx/examples/rna.fa
-rw-r--r-- root/root 29757 2024-10-25 19:23 ./usr/share/doc/pyfastx/examples/test.fa.gz
-rw-r--r-- root/root 59145 2024-10-25 19:23 ./usr/share/doc/pyfastx/examples/test.fq.gz
-rw-r--r-- root/root 2770 2024-08-30 18:31 ./usr/share/doc/pyfastx/test-cli
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/man/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/man/man1/
-rw-r--r-- root/root 704 2024-10-25 19:23 ./usr/share/man/man1/pyfastx.1.gz
python3-pyfastx-dbgsym_2.1.0-2+bd1_arm64.deb
--------------------------------------------
new Debian package, version 2.0.
size 235432 bytes: control archive=656 bytes.
453 bytes, 12 lines control
305 bytes, 3 lines md5sums
Package: python3-pyfastx-dbgsym
Source: pyfastx (2.1.0-2)
Version: 2.1.0-2+bd1
Auto-Built-Package: debug-symbols
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 288
Depends: python3-pyfastx (= 2.1.0-2+bd1)
Section: debug
Priority: optional
Description: debug symbols for python3-pyfastx
Build-Ids: 5acb5de46f2acc63c38432d8ab446a3df2f610bb f9c1247972a5ee1721ca983200edbfeadaac5e45
drwxr-xr-x root/root 0 2024-10-25 19:23 ./
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/.build-id/5a/
-rw-r--r-- root/root 135288 2024-10-25 19:23 ./usr/lib/debug/.build-id/5a/cb5de46f2acc63c38432d8ab446a3df2f610bb.debug
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/.build-id/f9/
-rw-r--r-- root/root 135528 2024-10-25 19:23 ./usr/lib/debug/.build-id/f9/c1247972a5ee1721ca983200edbfeadaac5e45.debug
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root 9016 2024-10-25 19:23 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-pyfastx.debug
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/
lrwxrwxrwx root/root 0 2024-10-25 19:23 ./usr/share/doc/python3-pyfastx-dbgsym -> python3-pyfastx
python3-pyfastx_2.1.0-2+bd1_arm64.deb
-------------------------------------
new Debian package, version 2.0.
size 61272 bytes: control archive=1440 bytes.
1668 bytes, 34 lines control
944 bytes, 10 lines md5sums
Package: python3-pyfastx
Source: pyfastx (2.1.0-2)
Version: 2.1.0-2+bd1
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 327
Depends: libc6 (>= 2.28), libsqlite3-0 (>= 3.5.9), python3, python3-pyfaidx
Section: python
Priority: optional
Homepage: https://github.com/lmdu/pyfastx
Description: fast random access to sequences from FASTA/Q file - python3 module
The pyfastx is a lightweight Python C extension that enables users to randomly
access to sequences from plain and gzipped FASTA/Q files. This module aims to
provide simple APIs for users to extract sequence from FASTA and reads from
FASTQ by identifier and index number. The pyfastx will build indexes stored in
a sqlite3 database file for random access to avoid consuming excessive amount
of memory. In addition, the pyfastx can parse standard (sequence is spread
into multiple lines with same length) and nonstandard (sequence is spread into
one or more lines with different length) FASTA format.
.
It features:
.
* a single file for the Python extension;
* lightweight, memory efficient FASTA/Q file parsing;
* fast random access to sequences from gzipped FASTA/Q file;
* sequences reading from FASTA file line by line;
* N50 and L50 calculation of sequences in FASTA file;
* GC content and nucleotides composition calculation;
* reverse, complement and antisense sequences extraction;
* excellent compatibility: support for parsing nonstandard FASTA file;
* support for FASTQ quality score conversion;
* a command line interface for splitting FASTA/Q file.
.
This package provides the python3 module.
drwxr-xr-x root/root 0 2024-10-25 19:23 ./
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/python3/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx-2.1.0.egg-info/
-rw-r--r-- root/root 30402 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx-2.1.0.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx-2.1.0.egg-info/dependency_links.txt
-rw-r--r-- root/root 44 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx-2.1.0.egg-info/entry_points.txt
-rw-r--r-- root/root 19 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx-2.1.0.egg-info/top_level.txt
-rw-r--r-- root/root 141264 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root 141264 2024-10-25 19:23 ./usr/lib/python3/dist-packages/pyfastx.cpython-313-aarch64-linux-gnu.so
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/
drwxr-xr-x root/root 0 2024-10-25 19:23 ./usr/share/doc/python3-pyfastx/
-rw-r--r-- root/root 221 2024-10-25 19:23 ./usr/share/doc/python3-pyfastx/changelog.Debian.arm64.gz
-rw-r--r-- root/root 997 2024-10-25 19:23 ./usr/share/doc/python3-pyfastx/changelog.Debian.gz
-rw-r--r-- root/root 3849 2024-02-28 11:39 ./usr/share/doc/python3-pyfastx/changelog.gz
-rw-r--r-- root/root 1433 2024-08-30 18:31 ./usr/share/doc/python3-pyfastx/copyright
lintian
-------
Setup apt archive
-----------------
Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
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-------------------------------------------------------
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Reading package lists...
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sbuild-build-depends-lintian-dummy
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Setting up sbuild-build-depends-lintian-dummy (0.invalid.0) ...
Running lintian...
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
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Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: any
Build-Space: 7180
Build-Time: 31
Distribution: sid
Host Architecture: arm64
Install-Time: 40
Job: /tmp/debusine-fetch-exec-upload-mjzdv3lg/pyfastx_2.1.0-2.dsc
Lintian: pass
Machine Architecture: arm64
Package: pyfastx
Package-Time: 109
Source-Version: 2.1.0-2
Space: 7180
Status: successful
Version: 2.1.0-2+bd1
--------------------------------------------------------------------------------
Finished at 2024-10-25T19:23:34Z
Build needed 00:01:49, 7180k disk space