Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises

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Documentation for package ‘SDMTools’ version 1.1-221.2

Help Pages

accuracy Measures of Model Accuracy
as.asc Raster conversion functions for adehabitat, raster and sp packages
asc.from.raster Raster conversion functions for adehabitat, raster and sp packages
asc.from.sp Raster conversion functions for adehabitat, raster and sp packages
asc2dataframe Ascii Grid Files to Dataframe and Dataframe to Ascii Grid Files
aspect Slope and aspect calculations
auc Area Under the Curve of the Reciever Operating Curve
circular.averaging Circular Averaging based on Vector Averaging
ClassStat Landscape Class Statistics
COGravity Centre of Gravity or Mass calculations for spatial data
compare.matrix Biplot Comparison of Matrices
confusion.matrix Confusion Matrix
ConnCompLabel Connected Components Labelling - Unique Patch Labelling
dataframe2asc Ascii Grid Files to Dataframe and Dataframe to Ascii Grid Files
destination Vincenty Direct Calculation of a Destination
distance Vincenty Direct Calculation of Distance and Direction
extract.data Spatial Join of Points with Raster Grids
getXYcoords Computes the X and Y Coordinates of the Pixels of a Raster Map
grid.area Create a Grid of Cell Areas or Perimeters
grid.info Grid Information from Geographic (lat lon) Projections
grid.perimeter Create a Grid of Cell Areas or Perimeters
image.asc ESRI ASCII Raster File Import And Export
ImageDiff Identify Regions of Significant Differences
Istat I Similarity Statistic for Quantifying Niche Overlap
Kappa Kappa Statistic
lcmw Least Cost Moving Windows Calculation
legend.gradient Legend Gradient
omission Measures of Accuracy
optim.thresh Estimation of Optimal Threshold Values
PatchStat Landscape Patch Statistics
pnt.in.poly Point in Polygon
print.asc ESRI ASCII Raster File Import And Export
prop.correct Measures of Accuracy
put.data Spatial Join of Points with Raster Grids - replace data
quick.map Quick Map
raster.from.asc Raster conversion functions for adehabitat, raster and sp packages
read.asc ESRI ASCII Raster File Import And Export
read.asc.gz ESRI ASCII Raster File Import And Export
Scalebar Scalebar for Projected Maps
sensitivity Measures of Accuracy
SigDiff Identify Regions of Significant Differences
slope Slope and aspect calculations
sp.from.asc Raster conversion functions for adehabitat, raster and sp packages
specificity Measures of Accuracy
vector.averaging Circular Averaging based on Vector Averaging
write.asc ESRI ASCII Raster File Import And Export
write.asc.gz ESRI ASCII Raster File Import And Export
write.asc2 ESRI ASCII Raster File Import And Export
write.asc2.gz ESRI ASCII Raster File Import And Export
wt.mean Weighted mean, variance and standard deviation calculations
wt.sd Weighted mean, variance and standard deviation calculations
wt.var Weighted mean, variance and standard deviation calculations
ZonalStat Landscape Zonal Statistics