deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: libc6 (>= 2.34), libgd3 (>= 2.1.0~alpha~)
Description: |-
transmembrane topology prediction
Toppred is a program to determine the topology of a transmembrane
protein based on G. von Heijne algorithm.
.
Each sequence from seq data in fasta format is processed, and toppred
generate the Hydrophobycity profile of the sequence, and the
corresponding hydrophobycities values in the file sequence-ID.hydro.
.
Furthermore, the predicted topologies are represented as png images.
Each topology is stored in file sequence-ID-number.png
.
The hydrophobicity profile is computed using a window formed by a core
rectangular window of size n, flanked by 2 triangular windows of size q.
NB rectangular and triangular mean that the ponderation values inside
those windows are respectively constant and variable.
.
This program is a new implementation of the original toppred program,
based on G. von Heijne algorithm
Homepage: https://github.com/bioinfo-center-pasteur-fr/toppred
Installed-Size: '230'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: toppred
Priority: optional
Section: science
Source: toppred (1.10-10)
Version: 1.10-10+b1
srcpkg_name: toppred
srcpkg_version: 1.10-10