deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), python3 (<<
3.13), python3 (>= 3.12~)
Description: |-
library for sequence alignment using edit distance (Python3 module)
A lightweight and super fast C/C++ library for sequence alignment using
edit distance.
.
Calculating edit distance of two strings is as simple as:
.
edlibAlign("hello", 5, "world!", 6,
edlibDefaultAlignConfig()).editDistance;
Features
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.
.
This package contains the Python3 module.
Homepage: https://github.com/Martinsos/edlib
Installed-Size: '192'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Multi-Arch: same
Package: python3-edlib
Priority: optional
Section: python
Source: libedlib (1.2.7-6)
Version: 1.2.7-6+b1
srcpkg_name: libedlib
srcpkg_version: 1.2.7-6