Uses of Class
org.forester.archaeopteryx.tools.PhylogeneticInferenceOptions
Packages that use PhylogeneticInferenceOptions
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Uses of PhylogeneticInferenceOptions in org.forester.archaeopteryx.tools
Methods in org.forester.archaeopteryx.tools that return PhylogeneticInferenceOptionsModifier and TypeMethodDescriptionPhylogeneticInferenceOptions.copy()
static PhylogeneticInferenceOptions
PhylogeneticInferenceOptions.createInstance
(Configuration configuration) PhyloInferenceDialog.getPhylogeneticInferenceOptions()
Constructors in org.forester.archaeopteryx.tools with parameters of type PhylogeneticInferenceOptionsModifierConstructorDescriptionPhylogeneticInferrer
(List<MolecularSequence> seqs, PhylogeneticInferenceOptions options, MainFrameApplication mf) PhylogeneticInferrer
(Msa msa, PhylogeneticInferenceOptions options, MainFrameApplication mf) PhyloInferenceDialog
(MainFrameApplication frame, PhylogeneticInferenceOptions options, boolean from_unaligned_seqs)