deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-thread1.83.0 (>= 1.83.0),
libc6 (>= 2.38), libexpat1 (>= 2.0.1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9),
libstdc++6 (>= 14), zlib1g (>= 1:1.2.6)
Description: |-
Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats. For expressed sequence tags (ESTs) transcripts, miraEST is
specialised on reconstructing pristine mRNA transcripts while
detecting and classifying single nucleotide polymorphisms (SNP)
occurring in different variations thereof.
.
The assembler is routinely used for such various tasks as mutation
detection in different cell types, similarity analysis of transcripts
between organisms, and pristine assembly of sequences from various
sources for oligo design in clinical microarray experiments.
.
The package provides the following executables:
Binaries provided:
* mira: for assembly of genome sequences
* miramem: estimating memory needed to assemble projects.
* mirabait: a "grep" like tool to select reads with kmers up to 256 bases.
* miraconvert: is a tool to convert, extract and sometimes recalculate all
kinds of data related to sequence assembly files.
Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/
Installed-Size: '7264'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: mira-assembler
Priority: optional
Recommends: mira-rfam-12s-rrna
Section: science
Source: mira (4.9.6-11)
Suggests: mira-doc
Version: 4.9.6-11+b1
srcpkg_name: mira
srcpkg_version: 4.9.6-11