sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-06.freexian.com
+==============================================================================+
| pybigwig 0.3.23+dfsg-1+bd1 (arm64) Mon, 04 Nov 2024 14:48:45 +0000 |
+==============================================================================+
Package: pybigwig
Version: 0.3.23+dfsg-1+bd1
Source Version: 0.3.23+dfsg-1
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: any
I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/942323/system.tar.xz to /tmp/tmp.sbuild.uUwi9oCUDl...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'
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| Chroot Setup Commands |
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Copying /tmp/debusine-fetch-exec-upload-w90wy5lb/python3-numpy-dbgsym_1.26.4+ds-11+bd1_arm64.deb to /<<CHROOT>>...
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I: NOTICE: Log filtering will replace 'build/pybigwig-FcWfch/resolver-UCnEmF' with '<<RESOLVERDIR>>'
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Get:1 file:/build/pybigwig-FcWfch/resolver-qbsof6/apt_archive ./ InRelease
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The following packages will be upgraded:
bsdextrautils bsdutils libblkid1 libmount1 libsmartcols1 libuuid1 login
mount util-linux
9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
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Get:7 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-10 [35.5 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-10 [1173 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-10 [79.8 kB]
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Local sources
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/tmp/debusine-fetch-exec-upload-w90wy5lb/pybigwig_0.3.23+dfsg-1.dsc exists in /tmp/debusine-fetch-exec-upload-w90wy5lb; copying to chroot
I: NOTICE: Log filtering will replace 'build/pybigwig-FcWfch/pybigwig-0.3.23+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/pybigwig-FcWfch' with '<<BUILDDIR>>'
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| Install package build dependencies |
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Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libcurl4-gnutls-dev, zlib1g-dev, libbigwig-dev, python3-all, python3-all-dev, python3-numpy, python3-setuptools, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libcurl4-gnutls-dev, zlib1g-dev, libbigwig-dev, python3-all, python3-all-dev, python3-numpy, python3-setuptools, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
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Reading package lists...
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Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-python dh-strip-nondeterminism dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libbigwig-dev
libbigwig0t64 libblas3 libbrotli-dev libc-dev-bin libc6-dev libcc1-0
libcrypt-dev libcurl4-gnutls-dev libdebhelper-perl libelf1t64
libevent-2.1-7t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgmp-dev
libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev
libhwasan0 libidn2-dev libisl23 libitm1 libjs-jquery libjs-sphinxdoc
libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6 libncursesw6
libnghttp2-dev libnghttp3-dev libngtcp2-crypto-gnutls-dev libngtcp2-dev
libnsl2 libp11-kit-dev libpkgconf3 libpsl-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib librtmp-dev libssh2-1-dev
libssl-dev libstdc++-14-dev libtasn1-6-dev libtirpc-common libtirpc3t64
libtool libtsan2 libubsan1 libunbound8 libzstd-dev linux-libc-dev m4
media-types nettle-dev pkgconf pkgconf-bin po-debconf
pybuild-plugin-pyproject python3 python3-all python3-all-dev
python3-autocommand python3-build python3-dev python3-inflect
python3-installer python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-minimal python3-more-itertools python3-numpy
python3-packaging python3-pkg-resources python3-pyproject-hooks
python3-setuptools python3-toml python3-typeguard python3-typing-extensions
python3-wheel python3-zipp python3.12 python3.12-dev python3.12-minimal
python3.13 python3.13-dev python3.13-minimal rpcsvc-proto zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
cpp-14-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex bison gdb
gcc-doc gdb-aarch64-linux-gnu libc-devtools glibc-doc libcurl4-doc
libidn-dev libkrb5-dev libldap2-dev gmp-doc libgmp10-doc libmpfr-dev
dns-root-data gnutls-bin gnutls-doc libnghttp2-doc p11-kit-doc libssl-doc
libstdc++-14-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
libmail-box-perl python3-doc python3-tk python3-venv python3-pip
python-build-doc python-installer-doc gfortran python-numpy-doc
python3-pytest python-setuptools-doc python3.12-venv python3.12-doc
binfmt-support python3.13-venv python3.13-doc
Recommended packages:
curl manpages manpages-dev libarchive-cpio-perl javascript-common libgpm2
libtasn1-doc libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev build-essential cpp cpp-14
cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
dh-python dh-strip-nondeterminism dwz fakeroot g++ g++-14
g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libbigwig-dev
libbigwig0t64 libblas3 libbrotli-dev libc-dev-bin libc6-dev libcc1-0
libcrypt-dev libcurl4-gnutls-dev libdebhelper-perl libelf1t64
libevent-2.1-7t64 libexpat1 libexpat1-dev libfakeroot
libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgmp-dev
libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev
libhwasan0 libidn2-dev libisl23 libitm1 libjs-jquery libjs-sphinxdoc
libjs-underscore liblapack3 liblsan0 libmpc3 libmpfr6 libncursesw6
libnghttp2-dev libnghttp3-dev libngtcp2-crypto-gnutls-dev libngtcp2-dev
libnsl2 libp11-kit-dev libpkgconf3 libpsl-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal
libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev
libpython3.13-minimal libpython3.13-stdlib librtmp-dev libssh2-1-dev
libssl-dev libstdc++-14-dev libtasn1-6-dev libtirpc-common libtirpc3t64
libtool libtsan2 libubsan1 libunbound8 libzstd-dev linux-libc-dev m4
media-types nettle-dev pkgconf pkgconf-bin po-debconf
pybuild-plugin-pyproject python3 python3-all python3-all-dev
python3-autocommand python3-build python3-dev python3-inflect
python3-installer python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-minimal python3-more-itertools python3-numpy
python3-packaging python3-pkg-resources python3-pyproject-hooks
python3-setuptools python3-toml python3-typeguard python3-typing-extensions
python3-wheel python3-zipp python3.12 python3.12-dev python3.12-minimal
python3.13 python3.13-dev python3.13-minimal rpcsvc-proto
sbuild-build-depends-main-dummy zlib1g-dev
0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded.
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Get:23 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.5-1 [2443 kB]
Get:30 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:31 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:32 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:38 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:39 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:40 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:41 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:43 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:44 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:46 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:48 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:49 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:50 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:51 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:52 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:54 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:55 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:56 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:57 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:58 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:63 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:65 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.4.0-1 [36.9 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:73 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:74 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get:75 http://deb.debian.org/debian sid/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get:76 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.20.2-1 [10.3 kB]
Get:77 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get:78 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20241024 [109 kB]
Get:79 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:80 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
Get:81 http://deb.debian.org/debian sid/main arm64 libbigwig0t64 arm64 0.4.7+dfsg-3.1+b2 [26.9 kB]
Get:82 http://deb.debian.org/debian sid/main arm64 libbigwig-dev arm64 0.4.7+dfsg-3.1+b2 [37.1 kB]
Get:83 http://deb.debian.org/debian sid/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB]
Get:84 http://deb.debian.org/debian sid/main arm64 libbrotli-dev arm64 1.1.0-2+b5 [308 kB]
Get:85 http://deb.debian.org/debian sid/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB]
Get:86 http://deb.debian.org/debian sid/main arm64 libunbound8 arm64 1.22.0-1 [553 kB]
Get:87 http://deb.debian.org/debian sid/main arm64 libgnutls-dane0t64 arm64 3.8.6-2+b1 [437 kB]
Get:88 http://deb.debian.org/debian sid/main arm64 libgnutls-openssl27t64 arm64 3.8.6-2+b1 [437 kB]
Get:89 http://deb.debian.org/debian sid/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB]
Get:90 http://deb.debian.org/debian sid/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB]
Get:91 http://deb.debian.org/debian sid/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB]
Get:92 http://deb.debian.org/debian sid/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB]
Get:93 http://deb.debian.org/debian sid/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB]
Get:94 http://deb.debian.org/debian sid/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB]
Get:95 http://deb.debian.org/debian sid/main arm64 libgnutls28-dev arm64 3.8.6-2+b1 [1398 kB]
Get:96 http://deb.debian.org/debian sid/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB]
Get:97 http://deb.debian.org/debian sid/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB]
Get:98 http://deb.debian.org/debian sid/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB]
Get:99 http://deb.debian.org/debian sid/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB]
Get:100 http://deb.debian.org/debian sid/main arm64 libnghttp3-dev arm64 1.4.0-1+b1 [85.2 kB]
Get:101 http://deb.debian.org/debian sid/main arm64 libngtcp2-crypto-gnutls-dev arm64 1.6.0-1 [23.7 kB]
Get:102 http://deb.debian.org/debian sid/main arm64 libngtcp2-dev arm64 1.6.0-1 [165 kB]
Get:103 http://deb.debian.org/debian sid/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB]
Get:104 http://deb.debian.org/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB]
Get:105 http://deb.debian.org/debian sid/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB]
Get:106 http://deb.debian.org/debian sid/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB]
Get:107 http://deb.debian.org/debian sid/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB]
Get:108 http://deb.debian.org/debian sid/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB]
Get:109 http://deb.debian.org/debian sid/main arm64 libcurl4-gnutls-dev arm64 8.10.1-2 [456 kB]
Get:110 http://deb.debian.org/debian sid/main arm64 libexpat1-dev arm64 2.6.3-2 [142 kB]
Get:111 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB]
Get:112 http://deb.debian.org/debian sid/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:113 http://deb.debian.org/debian sid/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:114 http://deb.debian.org/debian sid/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
Get:115 http://deb.debian.org/debian sid/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB]
Get:116 http://deb.debian.org/debian sid/main arm64 libpython3.12t64 arm64 3.12.7-1 [1982 kB]
Get:117 http://deb.debian.org/debian sid/main arm64 libpython3.12-dev arm64 3.12.7-1 [4793 kB]
Get:118 http://deb.debian.org/debian sid/main arm64 libpython3.13-stdlib arm64 3.13.0-1 [1920 kB]
Get:119 http://deb.debian.org/debian sid/main arm64 libpython3.13 arm64 3.13.0-1 [1960 kB]
Get:120 http://deb.debian.org/debian sid/main arm64 libpython3.13-dev arm64 3.13.0-1 [4668 kB]
Get:121 http://deb.debian.org/debian sid/main arm64 python3-packaging all 24.1-1 [45.8 kB]
Get:122 http://deb.debian.org/debian sid/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB]
Get:123 http://deb.debian.org/debian sid/main arm64 python3-toml all 0.10.2-1 [16.2 kB]
Get:124 http://deb.debian.org/debian sid/main arm64 python3-wheel all 0.44.0-2 [53.4 kB]
Get:125 http://deb.debian.org/debian sid/main arm64 python3-build all 1.2.2-1 [36.0 kB]
Get:126 http://deb.debian.org/debian sid/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB]
Get:127 http://deb.debian.org/debian sid/main arm64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB]
Get:128 http://deb.debian.org/debian sid/main arm64 python3.13 arm64 3.13.0-1 [730 kB]
Get:129 http://deb.debian.org/debian sid/main arm64 python3.12-dev arm64 3.12.7-1 [505 kB]
Get:130 http://deb.debian.org/debian sid/main arm64 python3.13-dev arm64 3.13.0-1 [504 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Setting up python3-minimal (3.12.6-1+debusine1) ...
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Setting up python3-build (1.2.2-1) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up libpython3-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libtool (2.4.7-8) ...
Setting up python3.13-dev (3.13.0-1) ...
Setting up python3-typeguard (4.4.0-1) ...
Setting up python3-all (3.12.6-1+debusine1) ...
Setting up libcurl4-gnutls-dev:arm64 (8.10.1-2) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up libpython3-all-dev:arm64 (3.12.6-1+debusine1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.12.6-1+debusine1) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up python3-all-dev (3.12.6-1+debusine1) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up debhelper (13.20) ...
Setting up python3-numpy (1:1.26.4+ds-11+bd1) ...
Setting up dh-python (6.20241024) ...
Setting up pybuild-plugin-pyproject (6.20241024) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (arm64 included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.5-1
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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: pybigwig
Binary: python3-pybigwig
Architecture: any
Version: 0.3.23+dfsg-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Diane Trout <diane@ghic.org>
Homepage: https://github.com/dpryan79/pyBigWig
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/pybigwig
Vcs-Git: https://salsa.debian.org/med-team/pybigwig.git
Testsuite: autopkgtest
Testsuite-Triggers: python3-all
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libcurl4-gnutls-dev, zlib1g-dev, libbigwig-dev, python3-all, python3-all-dev, python3-numpy, python3-setuptools
Package-List:
python3-pybigwig deb science optional arch=any
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Checksums-Sha256:
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Files:
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Dgit: fb3082b3df88aa36fd96bfe08ac9eec89b07ecc1 debian archive/debian/0.3.23+dfsg-1 https://git.dgit.debian.org/pybigwig
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gpgv: Signature made Sun Nov 3 16:14:37 2024 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./pybigwig_0.3.23+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting pybigwig in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking pybigwig_0.3.23+dfsg.orig.tar.gz
dpkg-source: info: unpacking pybigwig_0.3.23+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying prepareForExternalLibBigWig.patch
dpkg-source: info: applying gcc-14.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 0.3.23+dfsg-1+bd1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mDebusine Rebuild <debusine@example.net> -B -rfakeroot
dpkg-buildpackage: info: source package pybigwig
dpkg-buildpackage: info: source version 0.3.23+dfsg-1+bd1
dpkg-buildpackage: info: source distribution sid
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
dpkg-source: info: using options from pybigwig-0.3.23+dfsg/debian/source/options: --extend-diff-ignore=^(.*\.egg-info/)
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module
I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_pybigwig
* Building wheel...
running bdist_wheel
running build
running build_py
creating build/lib.linux-aarch64-cpython-313/pyBigWigTest
copying pyBigWigTest/__init__.py -> build/lib.linux-aarch64-cpython-313/pyBigWigTest
copying pyBigWigTest/test.py -> build/lib.linux-aarch64-cpython-313/pyBigWigTest
running egg_info
creating pyBigWig.egg-info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '**/*.h'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
running build_ext
building 'pyBigWig' extension
creating build/temp.linux-aarch64-cpython-313
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DWITHNUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -IlibBigWig -I/usr/include/python3.13 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.13 -c pyBigWig.c -o build/temp.linux-aarch64-cpython-313/pyBigWig.o
pyBigWig.c: In function ‘PyString_AsString’:
pyBigWig.c:773:12: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
773 | return PyUnicode_AsUTF8(obj);
| ^~~~~~~~~~~~~~~~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/pyBigWig.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/python3.13/config-3.13-aarch64-linux-gnu -L/usr/lib/python3/dist-packages/numpy/core/include/../lib -L/usr/lib/aarch64-linux-gnu -lBigWig -lm -lz -lpython3.13 -lcurl -lnpymath -o build/lib.linux-aarch64-cpython-313/pyBigWig.cpython-313-aarch64-linux-gnu.so
installing to build/bdist.linux-aarch64/wheel
running install
running install_lib
creating build/bdist.linux-aarch64/wheel
creating build/bdist.linux-aarch64/wheel/pyBigWigTest
copying build/lib.linux-aarch64-cpython-313/pyBigWigTest/__init__.py -> build/bdist.linux-aarch64/wheel/./pyBigWigTest
copying build/lib.linux-aarch64-cpython-313/pyBigWigTest/test.py -> build/bdist.linux-aarch64/wheel/./pyBigWigTest
copying build/lib.linux-aarch64-cpython-313/pyBigWig.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/.
running install_egg_info
Copying pyBigWig.egg-info to build/bdist.linux-aarch64/wheel/./pyBigWig-0.3.23.egg-info
running install_scripts
creating build/bdist.linux-aarch64/wheel/pyBigWig-0.3.23.dist-info/WHEEL
creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_pybigwig/.tmp-z6iti1_u/pyBigWig-0.3.23-cp313-cp313-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it
adding 'pyBigWig.cpython-313-aarch64-linux-gnu.so'
adding 'pyBigWigTest/__init__.py'
adding 'pyBigWigTest/test.py'
adding 'pyBigWig-0.3.23.dist-info/LICENSE.txt'
adding 'pyBigWig-0.3.23.dist-info/METADATA'
adding 'pyBigWig-0.3.23.dist-info/WHEEL'
adding 'pyBigWig-0.3.23.dist-info/top_level.txt'
adding 'pyBigWig-0.3.23.dist-info/RECORD'
removing build/bdist.linux-aarch64/wheel
Successfully built pyBigWig-0.3.23-cp313-cp313-linux_aarch64.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pybigwig
* Building wheel...
running bdist_wheel
running build
running build_py
creating build/lib.linux-aarch64-cpython-312/pyBigWigTest
copying pyBigWigTest/__init__.py -> build/lib.linux-aarch64-cpython-312/pyBigWigTest
copying pyBigWigTest/test.py -> build/lib.linux-aarch64-cpython-312/pyBigWigTest
running egg_info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '**/*.h'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
running build_ext
building 'pyBigWig' extension
creating build/temp.linux-aarch64-cpython-312
aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DWITHNUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -IlibBigWig -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c pyBigWig.c -o build/temp.linux-aarch64-cpython-312/pyBigWig.o
pyBigWig.c: In function ‘PyString_AsString’:
pyBigWig.c:773:12: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
773 | return PyUnicode_AsUTF8(obj);
| ^~~~~~~~~~~~~~~~~~~~~
aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/pyBigWig.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/python3.12/config-3.12-aarch64-linux-gnu -L/usr/lib/python3/dist-packages/numpy/core/include/../lib -L/usr/lib/aarch64-linux-gnu -lBigWig -lm -lz -lpython3.12 -lcurl -lnpymath -o build/lib.linux-aarch64-cpython-312/pyBigWig.cpython-312-aarch64-linux-gnu.so
installing to build/bdist.linux-aarch64/wheel
running install
running install_lib
creating build/bdist.linux-aarch64/wheel
creating build/bdist.linux-aarch64/wheel/pyBigWigTest
copying build/lib.linux-aarch64-cpython-312/pyBigWigTest/__init__.py -> build/bdist.linux-aarch64/wheel/./pyBigWigTest
copying build/lib.linux-aarch64-cpython-312/pyBigWigTest/test.py -> build/bdist.linux-aarch64/wheel/./pyBigWigTest
copying build/lib.linux-aarch64-cpython-312/pyBigWig.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/.
running install_egg_info
Copying pyBigWig.egg-info to build/bdist.linux-aarch64/wheel/./pyBigWig-0.3.23.egg-info
running install_scripts
creating build/bdist.linux-aarch64/wheel/pyBigWig-0.3.23.dist-info/WHEEL
creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pybigwig/.tmp-dcoam4sy/pyBigWig-0.3.23-cp312-cp312-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it
adding 'pyBigWig.cpython-312-aarch64-linux-gnu.so'
adding 'pyBigWigTest/__init__.py'
adding 'pyBigWigTest/test.py'
adding 'pyBigWig-0.3.23.dist-info/LICENSE.txt'
adding 'pyBigWig-0.3.23.dist-info/METADATA'
adding 'pyBigWig-0.3.23.dist-info/WHEEL'
adding 'pyBigWig-0.3.23.dist-info/top_level.txt'
adding 'pyBigWig-0.3.23.dist-info/RECORD'
removing build/bdist.linux-aarch64/wheel
Successfully built pyBigWig-0.3.23-cp312-cp312-linux_aarch64.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_pybigwig/build; python3.13 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
NO TESTS RAN
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_pybigwig/build; python3.12 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
NO TESTS RAN
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir
I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir
dh_numpy3
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 from: /lib/ld-linux-aarch64.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-pybigwig' in '../python3-pybigwig_0.3.23+dfsg-1+bd1_arm64.deb'.
dpkg-deb: building package 'python3-pybigwig-dbgsym' in '../python3-pybigwig-dbgsym_0.3.23+dfsg-1+bd1_arm64.deb'.
dpkg-genbuildinfo --build=any -O../pybigwig_0.3.23+dfsg-1+bd1_arm64.buildinfo
dpkg-genchanges --build=any -mDebusine Rebuild <debusine@example.net> -O../pybigwig_0.3.23+dfsg-1+bd1_arm64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from pybigwig-0.3.23+dfsg/debian/source/options: --extend-diff-ignore=^(.*\.egg-info/)
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-04T14:50:28Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
pybigwig_0.3.23+dfsg-1+bd1_arm64.changes:
-----------------------------------------
Format: 1.8
Date: Mon, 04 Nov 2024 14:50:10 +0000
Source: pybigwig (0.3.23+dfsg-1)
Binary: python3-pybigwig python3-pybigwig-dbgsym
Binary-Only: yes
Architecture: arm64
Version: 0.3.23+dfsg-1+bd1
Distribution: sid
Urgency: low
Maintainer: Debusine Rebuild <debusine@example.net>
Changed-By: Debusine Rebuild <debusine@example.net>
Description:
python3-pybigwig - Python 3 module for quick access to bigBed and bigWig files
Changes:
pybigwig (0.3.23+dfsg-1+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
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Checksums-Sha256:
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Files:
c4381dcb8f8b2005a2925b3364d4ccb4 8994 science optional pybigwig_0.3.23+dfsg-1+bd1_arm64.buildinfo
a15066c34e7e0e0ea43ba2db8d34b1f0 80364 debug optional python3-pybigwig-dbgsym_0.3.23+dfsg-1+bd1_arm64.deb
7b6aa6f995a0da9c39b28e9d15ee1dbe 44244 science optional python3-pybigwig_0.3.23+dfsg-1+bd1_arm64.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: pybigwig (0.3.23+dfsg-1)
Binary: python3-pybigwig python3-pybigwig-dbgsym
Architecture: arm64
Version: 0.3.23+dfsg-1+bd1
Binary-Only-Changes:
pybigwig (0.3.23+dfsg-1+bd1) sid; urgency=low, binary-only=yes
.
* Append +bd1 to version number; no source changes
* Binary-only non-maintainer upload for arm64; no source changes.
* Rebuild for python3.13
.
-- Debusine Rebuild <debusine@example.net> Mon, 04 Nov 2024 14:50:10 +0000
Checksums-Md5:
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Mon, 04 Nov 2024 14:50:27 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
autoconf (= 2.72-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.22.5-2),
autotools-dev (= 20220109.1),
base-files (= 13.5),
base-passwd (= 3.6.5),
bash (= 5.2.32-1+b2),
binutils (= 2.43.1-5),
binutils-aarch64-linux-gnu (= 2.43.1-5),
binutils-common (= 2.43.1-5),
bsdextrautils (= 2.40.2-10),
bsdutils (= 1:2.40.2-10),
build-essential (= 12.12),
bzip2 (= 1.0.8-6),
coreutils (= 9.5-1+b1),
cpp (= 4:14.2.0-1),
cpp-14 (= 14.2.0-8),
cpp-14-aarch64-linux-gnu (= 14.2.0-8),
cpp-aarch64-linux-gnu (= 4:14.2.0-1),
dash (= 0.5.12-9+b1),
debconf (= 1.5.87),
debhelper (= 13.20),
debianutils (= 5.20+b1),
dh-autoreconf (= 20),
dh-python (= 6.20241024),
dh-strip-nondeterminism (= 1.14.0-1),
diffutils (= 1:3.10-1+b1),
dpkg (= 1.22.11),
dpkg-dev (= 1.22.11),
dwz (= 0.15-1+b1),
file (= 1:5.45-3+b1),
findutils (= 4.10.0-3),
g++ (= 4:14.2.0-1),
g++-14 (= 14.2.0-8),
g++-14-aarch64-linux-gnu (= 14.2.0-8),
g++-aarch64-linux-gnu (= 4:14.2.0-1),
gcc (= 4:14.2.0-1),
gcc-14 (= 14.2.0-8),
gcc-14-aarch64-linux-gnu (= 14.2.0-8),
gcc-14-base (= 14.2.0-8),
gcc-aarch64-linux-gnu (= 4:14.2.0-1),
gettext (= 0.22.5-2),
gettext-base (= 0.22.5-2),
grep (= 3.11-4+b1),
groff-base (= 1.23.0-5),
gzip (= 1.12-1.1+b1),
hostname (= 3.25),
init-system-helpers (= 1.67),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.2-2+b1),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 14.2.0-8),
libatomic1 (= 14.2.0-8),
libattr1 (= 1:2.5.2-2),
libaudit-common (= 1:4.0.1-2),
libaudit1 (= 1:4.0.1-2),
libbigwig-dev (= 0.4.7+dfsg-3.1+b2),
libbigwig0t64 (= 0.4.7+dfsg-3.1+b2),
libbinutils (= 2.43.1-5),
libblas3 (= 3.12.0-3+b1),
libblkid1 (= 2.40.2-10),
libbrotli-dev (= 1.1.0-2+b5),
libbrotli1 (= 1.1.0-2+b5),
libbz2-1.0 (= 1.0.8-6),
libc-bin (= 2.40-3),
libc-dev-bin (= 2.40-3),
libc6 (= 2.40-3),
libc6-dev (= 2.40-3),
libcap-ng0 (= 0.8.5-3),
libcap2 (= 1:2.66-5+b1),
libcc1-0 (= 14.2.0-8),
libcom-err2 (= 1.47.1-1+b1),
libcrypt-dev (= 1:4.4.36-5),
libcrypt1 (= 1:4.4.36-5),
libctf-nobfd0 (= 2.43.1-5),
libctf0 (= 2.43.1-5),
libcurl3t64-gnutls (= 8.10.1-2),
libcurl4-gnutls-dev (= 8.10.1-2),
libdb5.3t64 (= 5.3.28+dfsg2-9),
libdebconfclient0 (= 0.273),
libdebhelper-perl (= 13.20),
libdpkg-perl (= 1.22.11),
libelf1t64 (= 0.192-4),
libevent-2.1-7t64 (= 2.1.12-stable-10+b1),
libexpat1 (= 2.6.3-2),
libexpat1-dev (= 2.6.3-2),
libffi8 (= 3.4.6-1),
libfile-stripnondeterminism-perl (= 1.14.0-1),
libgcc-14-dev (= 14.2.0-8),
libgcc-s1 (= 14.2.0-8),
libgdbm-compat4t64 (= 1.24-2),
libgdbm6t64 (= 1.24-2),
libgfortran5 (= 14.2.0-8),
libgmp-dev (= 2:6.3.0+dfsg-2+b2),
libgmp10 (= 2:6.3.0+dfsg-2+b2),
libgmpxx4ldbl (= 2:6.3.0+dfsg-2+b2),
libgnutls-dane0t64 (= 3.8.6-2+b1),
libgnutls-openssl27t64 (= 3.8.6-2+b1),
libgnutls28-dev (= 3.8.6-2+b1),
libgnutls30t64 (= 3.8.6-2+b1),
libgomp1 (= 14.2.0-8),
libgprofng0 (= 2.43.1-5),
libgssapi-krb5-2 (= 1.21.3-3),
libhogweed6t64 (= 3.10-1+b1),
libhwasan0 (= 14.2.0-8),
libicu72 (= 72.1-5+b1),
libidn2-0 (= 2.3.7-2+b1),
libidn2-dev (= 2.3.7-2+b1),
libisl23 (= 0.27-1),
libitm1 (= 14.2.0-8),
libjansson4 (= 2.14-2+b3),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-sphinxdoc (= 7.4.7-4),
libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
libk5crypto3 (= 1.21.3-3),
libkeyutils1 (= 1.6.3-4),
libkrb5-3 (= 1.21.3-3),
libkrb5support0 (= 1.21.3-3),
liblapack3 (= 3.12.0-3+b1),
libldap-2.5-0 (= 2.5.18+dfsg-3+b1),
liblsan0 (= 14.2.0-8),
liblzma5 (= 5.6.3-1+b1),
libmagic-mgc (= 1:5.45-3+b1),
libmagic1t64 (= 1:5.45-3+b1),
libmd0 (= 1.1.0-2+b1),
libmount1 (= 2.40.2-10),
libmpc3 (= 1.3.1-1+b3),
libmpfr6 (= 4.2.1-1+b2),
libncursesw6 (= 6.5-2+b1),
libnettle8t64 (= 3.10-1+b1),
libnghttp2-14 (= 1.64.0-1),
libnghttp2-dev (= 1.64.0-1),
libnghttp3-9 (= 1.4.0-1+b1),
libnghttp3-dev (= 1.4.0-1+b1),
libngtcp2-16 (= 1.6.0-1),
libngtcp2-crypto-gnutls-dev (= 1.6.0-1),
libngtcp2-crypto-gnutls8 (= 1.6.0-1),
libngtcp2-dev (= 1.6.0-1),
libnsl2 (= 1.3.0-3+b3),
libp11-kit-dev (= 0.25.5-2+b1),
libp11-kit0 (= 0.25.5-2+b1),
libpam-modules (= 1.5.3-7+b1),
libpam-modules-bin (= 1.5.3-7+b1),
libpam-runtime (= 1.5.3-7),
libpam0g (= 1.5.3-7+b1),
libpcre2-8-0 (= 10.42-4+b2),
libperl5.40 (= 5.40.0-6),
libpipeline1 (= 1.5.8-1),
libpkgconf3 (= 1.8.1-4),
libpsl-dev (= 0.21.2-1.1+b1),
libpsl5t64 (= 0.21.2-1.1+b1),
libpython3-all-dev (= 3.12.6-1+debusine1),
libpython3-dev (= 3.12.6-1+debusine1),
libpython3-stdlib (= 3.12.6-1+debusine1),
libpython3.12-dev (= 3.12.7-1),
libpython3.12-minimal (= 3.12.7-1),
libpython3.12-stdlib (= 3.12.7-1),
libpython3.12t64 (= 3.12.7-1),
libpython3.13 (= 3.13.0-1),
libpython3.13-dev (= 3.13.0-1),
libpython3.13-minimal (= 3.13.0-1),
libpython3.13-stdlib (= 3.13.0-1),
libreadline8t64 (= 8.2-5),
librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5),
libsasl2-2 (= 2.1.28+dfsg1-8),
libsasl2-modules-db (= 2.1.28+dfsg1-8),
libseccomp2 (= 2.5.5-1+b2),
libselinux1 (= 3.7-3),
libsframe1 (= 2.43.1-5),
libsmartcols1 (= 2.40.2-10),
libsqlite3-0 (= 3.46.1-1),
libssh2-1-dev (= 1.11.1-1),
libssh2-1t64 (= 1.11.1-1),
libssl-dev (= 3.3.2-2),
libssl3t64 (= 3.3.2-2),
libstdc++-14-dev (= 14.2.0-8),
libstdc++6 (= 14.2.0-8),
libsystemd0 (= 256.7-3),
libtasn1-6 (= 4.19.0-3+b3),
libtasn1-6-dev (= 4.19.0-3+b3),
libtinfo6 (= 6.5-2+b1),
libtirpc-common (= 1.3.4+ds-1.3),
libtirpc3t64 (= 1.3.4+ds-1.3+b1),
libtool (= 2.4.7-8),
libtsan2 (= 14.2.0-8),
libubsan1 (= 14.2.0-8),
libuchardet0 (= 0.0.8-1+b2),
libudev1 (= 256.7-3),
libunbound8 (= 1.22.0-1),
libunistring5 (= 1.2-1+b1),
libuuid1 (= 2.40.2-10),
libxml2 (= 2.12.7+dfsg+really2.9.14-0.1),
libzstd-dev (= 1.5.6+dfsg-1+b1),
libzstd1 (= 1.5.6+dfsg-1+b1),
linux-libc-dev (= 6.11.5-1),
m4 (= 1.4.19-4),
make (= 4.3-4.1+b1),
man-db (= 2.13.0-1),
mawk (= 1.3.4.20240905-1),
media-types (= 10.1.0),
ncurses-base (= 6.5-2),
ncurses-bin (= 6.5-2+b1),
netbase (= 6.4),
nettle-dev (= 3.10-1+b1),
openssl-provider-legacy (= 3.3.2-2),
patch (= 2.7.6-7+b1),
perl (= 5.40.0-6),
perl-base (= 5.40.0-6),
perl-modules-5.40 (= 5.40.0-6),
pkgconf (= 1.8.1-4),
pkgconf-bin (= 1.8.1-4),
po-debconf (= 1.0.21+nmu1),
pybuild-plugin-pyproject (= 6.20241024),
python3 (= 3.12.6-1+debusine1),
python3-all (= 3.12.6-1+debusine1),
python3-all-dev (= 3.12.6-1+debusine1),
python3-autocommand (= 2.2.2-3),
python3-build (= 1.2.2-1),
python3-dev (= 3.12.6-1+debusine1),
python3-inflect (= 7.3.1-2),
python3-installer (= 0.7.0+dfsg1-3),
python3-jaraco.context (= 6.0.0-1),
python3-jaraco.functools (= 4.1.0-1),
python3-jaraco.text (= 4.0.0-1),
python3-minimal (= 3.12.6-1+debusine1),
python3-more-itertools (= 10.5.0-1),
python3-numpy (= 1:1.26.4+ds-11+bd1),
python3-packaging (= 24.1-1),
python3-pkg-resources (= 75.2.0-1),
python3-pyproject-hooks (= 1.2.0-1),
python3-setuptools (= 75.2.0-1),
python3-toml (= 0.10.2-1),
python3-typeguard (= 4.4.0-1),
python3-typing-extensions (= 4.12.2-2),
python3-wheel (= 0.44.0-2),
python3-zipp (= 3.20.2-1),
python3.12 (= 3.12.7-1),
python3.12-dev (= 3.12.7-1),
python3.12-minimal (= 3.12.7-1),
python3.13 (= 3.13.0-1),
python3.13-dev (= 3.13.0-1),
python3.13-minimal (= 3.13.0-1),
readline-common (= 8.2-5),
rpcsvc-proto (= 1.4.3-1+b1),
sed (= 4.9-2+b1),
sensible-utils (= 0.0.24),
sysvinit-utils (= 3.11-1),
tar (= 1.35+dfsg-3+b1),
tzdata (= 2024b-3),
util-linux (= 2.40.2-10),
xz-utils (= 5.6.3-1+b1),
zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1),
zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
DEB_BUILD_OPTIONS="parallel=8"
LANG="C.UTF-8"
LC_COLLATE="C.UTF-8"
LC_CTYPE="C.UTF-8"
SOURCE_DATE_EPOCH="1730731810"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-pybigwig-dbgsym_0.3.23+dfsg-1+bd1_arm64.deb
---------------------------------------------------
new Debian package, version 2.0.
size 80364 bytes: control archive=656 bytes.
475 bytes, 12 lines control
306 bytes, 3 lines md5sums
Package: python3-pybigwig-dbgsym
Source: pybigwig (0.3.23+dfsg-1)
Version: 0.3.23+dfsg-1+bd1
Auto-Built-Package: debug-symbols
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 136
Depends: python3-pybigwig (= 0.3.23+dfsg-1+bd1)
Section: debug
Priority: optional
Description: debug symbols for python3-pybigwig
Build-Ids: 11c5ac903265f624b89d98fcb542dc62ec36e750 efd7f9e5d95648b4dfb3bc2d465ff77a5bf876b9
drwxr-xr-x root/root 0 2024-11-04 14:50 ./
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drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/.build-id/11/
-rw-r--r-- root/root 57856 2024-11-04 14:50 ./usr/lib/debug/.build-id/11/c5ac903265f624b89d98fcb542dc62ec36e750.debug
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/.build-id/ef/
-rw-r--r-- root/root 57856 2024-11-04 14:50 ./usr/lib/debug/.build-id/ef/d7f9e5d95648b4dfb3bc2d465ff77a5bf876b9.debug
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/debug/.dwz/aarch64-linux-gnu/
-rw-r--r-- root/root 8632 2024-11-04 14:50 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-pybigwig.debug
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/share/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/share/doc/
lrwxrwxrwx root/root 0 2024-11-04 14:50 ./usr/share/doc/python3-pybigwig-dbgsym -> python3-pybigwig
python3-pybigwig_0.3.23+dfsg-1+bd1_arm64.deb
--------------------------------------------
new Debian package, version 2.0.
size 44244 bytes: control archive=1908 bytes.
1853 bytes, 31 lines control
1036 bytes, 11 lines md5sums
279 bytes, 12 lines * postinst #!/bin/sh
392 bytes, 12 lines * prerm #!/bin/sh
Package: python3-pybigwig
Source: pybigwig (0.3.23+dfsg-1)
Version: 0.3.23+dfsg-1+bd1
Architecture: arm64
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 317
Depends: python3-numpy (>= 1:1.25.0), python3-numpy-abi9, python3 (<< 3.14), python3 (>= 3.12~), python3:any, libbigwig0t64 (>= 0.4.6), libc6 (>= 2.17), libpython3.12t64 (>= 3.12.1), libpython3.13 (>= 3.13.0~rc3)
Section: science
Priority: optional
Homepage: https://github.com/dpryan79/pyBigWig
Description: Python 3 module for quick access to bigBed and bigWig files
This is a Python extension, written in C, for quick access to bigBed files,
and access to and creation of bigWig files.
.
The bigWig format was originally created in the context of genome
browsers. There, computing exact summary statistics for a given interval
is less important than quickly being able to compute an approximate
statistic. Because of this, bigWig files contain not only interval-value
associations, but also `sum of values`/`sum of squared values`/`minimum
value`/`maximum value`/`number of bases covered` for equally sized
bins of various sizes. These different sizes are referred to as "zoom
levels". The smallest zoom level has bins that are 16 times the mean
interval size in the file and each subsequent zoom level has bins 4 times
larger than the previous. This methodology is used in Kent's tools and,
therefore, likely used in almost every currently existing bigWig file.
.
When a bigWig file is queried for a summary statistic, the size of the
interval is used to determine whether to use a zoom level and, if so,
which one. The optimal zoom level is that which has the largest bins no
more than half the width of the desired interval. If no such zoom level
exists, the original intervals are instead used for the calculation.
drwxr-xr-x root/root 0 2024-11-04 14:50 ./
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/python3/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig-0.3.23.dist-info/
-rw-r--r-- root/root 7 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig-0.3.23.dist-info/INSTALLER
-rw-r--r-- root/root 19746 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig-0.3.23.dist-info/METADATA
-rw-r--r-- root/root 105 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig-0.3.23.dist-info/WHEEL
-rw-r--r-- root/root 22 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig-0.3.23.dist-info/top_level.txt
-rw-r--r-- root/root 134496 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig.cpython-312-aarch64-linux-gnu.so
-rw-r--r-- root/root 134496 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWig.cpython-313-aarch64-linux-gnu.so
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWigTest/
-rw-r--r-- root/root 0 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWigTest/__init__.py
-rw-r--r-- root/root 13185 2024-11-04 14:50 ./usr/lib/python3/dist-packages/pyBigWigTest/test.py
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/share/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/share/doc/
drwxr-xr-x root/root 0 2024-11-04 14:50 ./usr/share/doc/python3-pybigwig/
-rw-r--r-- root/root 225 2024-11-04 14:50 ./usr/share/doc/python3-pybigwig/changelog.Debian.arm64.gz
-rw-r--r-- root/root 836 2024-11-04 14:50 ./usr/share/doc/python3-pybigwig/changelog.Debian.gz
-rw-r--r-- root/root 1461 2024-11-03 15:55 ./usr/share/doc/python3-pybigwig/copyright
lintian
-------
Setup apt archive
-----------------
Merged Build-Depends: lintian
Filtered Build-Depends: lintian
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
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Reading package lists...
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Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
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Unpacking sbuild-build-depends-lintian-dummy (0.invalid.0) ...
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Running lintian...
I: Lintian run was successful.
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: arm64
Build Type: any
Build-Space: 3140
Build-Time: 17
Distribution: sid
Host Architecture: arm64
Install-Time: 46
Job: /tmp/debusine-fetch-exec-upload-w90wy5lb/pybigwig_0.3.23+dfsg-1.dsc
Lintian: pass
Machine Architecture: arm64
Package: pybigwig
Package-Time: 103
Source-Version: 0.3.23+dfsg-1
Space: 3140
Status: successful
Version: 0.3.23+dfsg-1+bd1
--------------------------------------------------------------------------------
Finished at 2024-11-04T14:50:28Z
Build needed 00:01:43, 3140k disk space