Artifact conservation-code_20110309.0-8_arm64-2024-11-15T22:48:15Z

Metadata
bd_uninstallable: null
filename: conservation-code_20110309.0-8_arm64-2024-11-15T22:48:15Z.build
source: conservation-code
version: 20110309.0-8

File

conservation-code_20110309.0-8_arm64-2024-11-15T22:48:15Z.build 
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sbuild (Debian sbuild) 0.86.3~bpo12+1 (03 November 2024) on debusine-worker-arm64-demeter-09.freexian.com

+==============================================================================+
| conservation-code 20110309.0-8 (arm64)       Fri, 15 Nov 2024 22:48:15 +0000 |
+==============================================================================+

Package: conservation-code
Version: 20110309.0-8
Source Version: 20110309.0-8
Distribution: sid
Machine Architecture: arm64
Host Architecture: arm64
Build Architecture: arm64
Build Type: binary

I: No tarballs found in /var/lib/debusine/worker/.cache/sbuild
Unpacking /var/lib/debusine/worker/system-images/957781/system.tar.xz to /tmp/tmp.sbuild.cvFkJIixO9...
I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


rm -f /etc/resolv.conf
----------------------


I: Finished running 'rm -f /etc/resolv.conf'.

Finished processing commands.
--------------------------------------------------------------------------------
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/dpkg_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/dselect-dbgsym_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/dselect_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/libdpkg-dev_1.22.12~1.gbp82cafd_arm64.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/dpkg-dev_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
Copying /tmp/debusine-fetch-exec-upload-uwfj9mh8/libdpkg-perl_1.22.12~1.gbp82cafd_all.deb to /<<CHROOT>>...
I: NOTICE: Log filtering will replace 'build/conservation-code-TfDzhf/resolver-iloQW6' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ InRelease
Ign:1 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ InRelease
Get:2 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ Release [606 B]
Get:3 http://deb.debian.org/debian sid InRelease [202 kB]
Get:2 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ Release [606 B]
Get:4 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ Release.gpg
Ign:4 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ Release.gpg
Get:5 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ Packages [9246 B]
Get:6 http://deb.debian.org/debian sid/main arm64 Packages [9951 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 Components [4908 kB]
Fetched 15.1 MB in 2s (6410 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages will be upgraded:
  apt bsdextrautils bsdutils debianutils dpkg dpkg-dev libapt-pkg6.0t64
  libaudit-common libaudit1 libblkid1 libbrotli1 libcap-ng0 libdpkg-perl
  libglib2.0-0t64 libmarkdown2 libmount1 libpcre2-8-0 libseccomp2 libselinux1
  libsemanage2 libsmartcols1 libuuid1 libxml2 login mount util-linux
26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 7324 kB/10.8 MB of archives.
After this operation, 604 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main arm64 bsdutils arm64 1:2.40.2-11 [104 kB]
Get:2 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ dpkg 1.22.12~1.gbp82cafd [1513 kB]
Get:3 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ dpkg-dev 1.22.12~1.gbp82cafd [1337 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 debianutils arm64 5.21 [92.1 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 libapt-pkg6.0t64 arm64 2.9.11 [921 kB]
Get:6 file:/build/conservation-code-TfDzhf/resolver-qnyf9d/apt_archive ./ libdpkg-perl 1.22.12~1.gbp82cafd [647 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libblkid1 arm64 2.40.2-11 [162 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libmount1 arm64 2.40.2-11 [190 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libsmartcols1 arm64 2.40.2-11 [135 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 mount arm64 2.40.2-11 [153 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 libuuid1 arm64 2.40.2-11 [35.7 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 util-linux arm64 2.40.2-11 [1170 kB]
Get:14 http://deb.debian.org/debian sid/main arm64 libpcre2-8-0 arm64 10.44-4 [243 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 libselinux1 arm64 3.7-3+b1 [72.1 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 libseccomp2 arm64 2.5.5-1+b3 [46.8 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 apt arm64 2.9.11 [1287 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 libcap-ng0 arm64 0.8.5-3+b1 [17.0 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libaudit1 arm64 1:4.0.2-2 [54.2 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 login arm64 1:4.16.0-2+really2.40.2-11 [80.0 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libsemanage2 arm64 3.7-2+b1 [84.5 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
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Setting up login (1:4.16.0-2+really2.40.2-11) ...
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Processing triggers for man-db (2.13.0-1) ...
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+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/tmp/debusine-fetch-exec-upload-uwfj9mh8/conservation-code_20110309.0-8.dsc exists in /tmp/debusine-fetch-exec-upload-uwfj9mh8; copying to chroot
I: NOTICE: Log filtering will replace 'build/conservation-code-TfDzhf/conservation-code-20110309.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/conservation-code-TfDzhf' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), dh-python, python3, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 12), dh-python, python3, build-essential, fakeroot
dpkg-deb: warning: root directory has unusual owner or group 998:999.
Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [637 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [669 B]
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Reading package lists...
Get:1 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ Release [606 B]
Get:2 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ Release [606 B]
Get:3 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ Release.gpg
Ign:3 file:/<<BUILDDIR>>/resolver-qnyf9d/apt_archive ./ Release.gpg
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
  dh-python dh-strip-nondeterminism dwz fakeroot g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libc-dev-bin
  libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libelf1t64 libexpat1
  libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev libhwasan0
  libisl23 libitm1 liblsan0 libmpc3 libmpfr6 libncursesw6 libnsl2
  libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib
  libstdc++-14-dev libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  linux-libc-dev m4 media-types po-debconf python3 python3-autocommand
  python3-inflect python3-jaraco.context python3-jaraco.functools
  python3-jaraco.text python3-minimal python3-more-itertools
  python3-pkg-resources python3-setuptools python3-typeguard
  python3-typing-extensions python3-zipp python3.12 python3.12-minimal
  rpcsvc-proto
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
  cpp-14-doc dh-make flit python3-build python3-installer python3-wheel
  gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
  gdb-aarch64-linux-gnu libc-devtools glibc-doc libstdc++-14-doc libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-doc
  python3-tk python3-venv python-setuptools-doc python3.12-venv python3.12-doc
  binfmt-support
Recommended packages:
  manpages manpages-dev libarchive-cpio-perl libgpm2 libltdl-dev
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev build-essential cpp cpp-14
  cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu debhelper dh-autoreconf
  dh-python dh-strip-nondeterminism dwz fakeroot g++ g++-14
  g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
  gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libc-dev-bin
  libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libelf1t64 libexpat1
  libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev libhwasan0
  libisl23 libitm1 liblsan0 libmpc3 libmpfr6 libncursesw6 libnsl2
  libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib
  libstdc++-14-dev libtirpc-common libtirpc3t64 libtool libtsan2 libubsan1
  linux-libc-dev m4 media-types po-debconf python3 python3-autocommand
  python3-inflect python3-jaraco.context python3-jaraco.functools
  python3-jaraco.text python3-minimal python3-more-itertools
  python3-pkg-resources python3-setuptools python3-typeguard
  python3-typing-extensions python3-zipp python3.12 python3.12-minimal
  rpcsvc-proto sbuild-build-depends-main-dummy
0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded.
Need to get 68.0 MB of archives.
After this operation, 271 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [892 B]
Get:2 http://deb.debian.org/debian sid/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB]
Get:3 http://deb.debian.org/debian sid/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get:4 http://deb.debian.org/debian sid/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB]
Get:5 http://deb.debian.org/debian sid/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB]
Get:6 http://deb.debian.org/debian sid/main arm64 media-types all 10.1.0 [26.9 kB]
Get:7 http://deb.debian.org/debian sid/main arm64 libncursesw6 arm64 6.5-2+b1 [125 kB]
Get:8 http://deb.debian.org/debian sid/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:9 http://deb.debian.org/debian sid/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB]
Get:10 http://deb.debian.org/debian sid/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB]
Get:11 http://deb.debian.org/debian sid/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB]
Get:12 http://deb.debian.org/debian sid/main arm64 python3.12 arm64 3.12.7-3 [671 kB]
Get:13 http://deb.debian.org/debian sid/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B]
Get:14 http://deb.debian.org/debian sid/main arm64 python3 arm64 3.12.7-1 [27.8 kB]
Get:15 http://deb.debian.org/debian sid/main arm64 m4 arm64 1.4.19-4 [277 kB]
Get:16 http://deb.debian.org/debian sid/main arm64 autoconf all 2.72-3 [493 kB]
Get:17 http://deb.debian.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get:18 http://deb.debian.org/debian sid/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get:19 http://deb.debian.org/debian sid/main arm64 autopoint all 0.22.5-2 [723 kB]
Get:20 http://deb.debian.org/debian sid/main arm64 libc-dev-bin arm64 2.40-3 [50.9 kB]
Get:21 http://deb.debian.org/debian sid/main arm64 linux-libc-dev all 6.11.7-1 [2454 kB]
Get:22 http://deb.debian.org/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB]
Get:23 http://deb.debian.org/debian sid/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB]
Get:24 http://deb.debian.org/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB]
Get:25 http://deb.debian.org/debian sid/main arm64 libisl23 arm64 0.27-1 [601 kB]
Get:26 http://deb.debian.org/debian sid/main arm64 libmpfr6 arm64 4.2.1-1+b2 [680 kB]
Get:27 http://deb.debian.org/debian sid/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB]
Get:28 http://deb.debian.org/debian sid/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-8 [9166 kB]
Get:29 http://deb.debian.org/debian sid/main arm64 cpp-14 arm64 14.2.0-8 [1284 B]
Get:30 http://deb.debian.org/debian sid/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B]
Get:31 http://deb.debian.org/debian sid/main arm64 cpp arm64 4:14.2.0-1 [1568 B]
Get:32 http://deb.debian.org/debian sid/main arm64 libcc1-0 arm64 14.2.0-8 [42.2 kB]
Get:33 http://deb.debian.org/debian sid/main arm64 libitm1 arm64 14.2.0-8 [24.2 kB]
Get:34 http://deb.debian.org/debian sid/main arm64 libasan8 arm64 14.2.0-8 [2579 kB]
Get:35 http://deb.debian.org/debian sid/main arm64 liblsan0 arm64 14.2.0-8 [1161 kB]
Get:36 http://deb.debian.org/debian sid/main arm64 libtsan2 arm64 14.2.0-8 [2386 kB]
Get:37 http://deb.debian.org/debian sid/main arm64 libubsan1 arm64 14.2.0-8 [1039 kB]
Get:38 http://deb.debian.org/debian sid/main arm64 libhwasan0 arm64 14.2.0-8 [1442 kB]
Get:39 http://deb.debian.org/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-8 [2365 kB]
Get:40 http://deb.debian.org/debian sid/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-8 [17.7 MB]
Get:41 http://deb.debian.org/debian sid/main arm64 gcc-14 arm64 14.2.0-8 [519 kB]
Get:42 http://deb.debian.org/debian sid/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B]
Get:43 http://deb.debian.org/debian sid/main arm64 gcc arm64 4:14.2.0-1 [5136 B]
Get:44 http://deb.debian.org/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-8 [2267 kB]
Get:45 http://deb.debian.org/debian sid/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-8 [10.1 MB]
Get:46 http://deb.debian.org/debian sid/main arm64 g++-14 arm64 14.2.0-8 [20.2 kB]
Get:47 http://deb.debian.org/debian sid/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B]
Get:48 http://deb.debian.org/debian sid/main arm64 g++ arm64 4:14.2.0-1 [1332 B]
Get:49 http://deb.debian.org/debian sid/main arm64 build-essential arm64 12.12 [4624 B]
Get:50 http://deb.debian.org/debian sid/main arm64 libdebhelper-perl all 13.20 [89.7 kB]
Get:51 http://deb.debian.org/debian sid/main arm64 libtool all 2.4.7-8 [517 kB]
Get:52 http://deb.debian.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB]
Get:53 http://deb.debian.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:54 http://deb.debian.org/debian sid/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:55 http://deb.debian.org/debian sid/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get:56 http://deb.debian.org/debian sid/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get:57 http://deb.debian.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:58 http://deb.debian.org/debian sid/main arm64 debhelper all 13.20 [915 kB]
Get:59 http://deb.debian.org/debian sid/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:60 http://deb.debian.org/debian sid/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get:61 http://deb.debian.org/debian sid/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:62 http://deb.debian.org/debian sid/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get:63 http://deb.debian.org/debian sid/main arm64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:64 http://deb.debian.org/debian sid/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:65 http://deb.debian.org/debian sid/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:66 http://deb.debian.org/debian sid/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get:67 http://deb.debian.org/debian sid/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get:68 http://deb.debian.org/debian sid/main arm64 python3-zipp all 3.21.0-1 [10.6 kB]
Get:69 http://deb.debian.org/debian sid/main arm64 python3-setuptools all 75.2.0-1 [731 kB]
Get:70 http://deb.debian.org/debian sid/main arm64 dh-python all 6.20241024 [109 kB]
Get:71 http://deb.debian.org/debian sid/main arm64 libfakeroot arm64 1.36-1 [29.1 kB]
Get:72 http://deb.debian.org/debian sid/main arm64 fakeroot arm64 1.36-1 [74.4 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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Setting up libnsl2:arm64 (1.3.0-3+b3) ...
Setting up libc6-dev:arm64 (2.40-3) ...
Setting up libgcc-14-dev:arm64 (14.2.0-8) ...
Setting up libstdc++-14-dev:arm64 (14.2.0-8) ...
Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ...
Setting up python3.12 (3.12.7-3) ...
Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up cpp-14 (14.2.0-8) ...
Setting up cpp (4:14.2.0-1) ...
Setting up gcc-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up libpython3-stdlib:arm64 (3.12.7-1) ...
Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14-aarch64-linux-gnu (14.2.0-8) ...
Setting up python3 (3.12.7-1) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up gcc-14 (14.2.0-8) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14 (14.2.0-8) ...
Setting up python3-more-itertools (10.5.0-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up libtool (2.4.7-8) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up gcc (4:14.2.0-1) ...
Setting up dh-autoreconf (20) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up g++ (4:14.2.0-1) ...
update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
Setting up build-essential (12.12) ...
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up python3-setuptools (75.2.0-1) ...
Setting up debhelper (13.20) ...
Setting up dh-python (6.20241024) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for man-db (2.13.0-1) ...
Processing triggers for libc-bin (2.40-3) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (arm64 included in all)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) arm64 (aarch64)
Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.12~1.gbp82cafd g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++6_14.2.0-8 linux-libc-dev_6.11.7-1
Package versions: appstream_1.0.3-1+b1 apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-aarch64-linux-gnu_2.43.1-5 binutils-common_2.43.1-5 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-aarch64-linux-gnu_14.2.0-8 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-9+b1 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-python_6.20241024 dh-strip-nondeterminism_1.14.0-1 diffstat_1.66-1+b1 diffutils_1:3.10-1+b1 dpkg_1.22.12~1.gbp82cafd dpkg-dev_1.22.12~1.gbp82cafd dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-aarch64-linux-gnu_14.2.0-8 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 gcc-14-aarch64-linux-gnu_14.2.0-8 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passwd_1:4.16.0-4 patch_2.7.6-7+b1 patchutils_0.4.2-1+b1 perl_5.40.0-7 perl-base_5.40.0-7 perl-modules-5.40_5.40.0-7 perl-openssl-defaults_7+b2 plzip_1.11-2 po-debconf_1.0.21+nmu1 python3_3.12.7-1 python3-autocommand_2.2.2-3 python3-inflect_7.3.1-2 python3-jaraco.context_6.0.0-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.12.7-1 python3-more-itertools_10.5.0-1 python3-pkg-resources_75.2.0-1 python3-setuptools_75.2.0-1 python3-typeguard_4.4.1-1 python3-typing-extensions_4.12.2-2 python3-zipp_3.21.0-1 python3.12_3.12.7-3 python3.12-minimal_3.12.7-3 readline-common_8.2-5 rpcsvc-proto_1.4.3-1+b1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2+b1 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sysvinit-utils_3.11-1 t1utils_1.41-4+b1 tar_1.35+dfsg-3+b1 tzdata_2024b-3 ucf_3.0043+nmu1 unzip_6.0-28+b1 util-linux_2.40.2-11 xz-utils_5.6.3-1+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: conservation-code
Binary: conservation-code
Architecture: all
Version: 20110309.0-8
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Laszlo Kajan <lkajan@rostlab.org>, Andreas Tille <tille@debian.org>
Homepage: https://compbio.cs.princeton.edu/conservation/
Standards-Version: 4.4.1
Vcs-Browser: https://salsa.debian.org/med-team/conservation-code
Vcs-Git: https://salsa.debian.org/med-team/conservation-code.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 12), dh-python, python3
Package-List:
 conservation-code deb science optional arch=all
Checksums-Sha1:
 5252fa94c2390557c01932301ae0bb59c0c16fd6 19560 conservation-code_20110309.0.orig.tar.xz
 68980e389d3f9f011f32ff6db987a9a64a8e4206 14140 conservation-code_20110309.0-8.debian.tar.xz
Checksums-Sha256:
 caef16e54abe983d591721aef34fa5f0fc051d1f2fce9ac5637a3681be37a993 19560 conservation-code_20110309.0.orig.tar.xz
 0576bde4fc2db5f9392acbde9f025d8e225a3bda170a006d8c1d2818f438cf2c 14140 conservation-code_20110309.0-8.debian.tar.xz
Files:
 9a202bfba21616c53bb0ea52f7b8b791 19560 conservation-code_20110309.0.orig.tar.xz
 a7f04eb1844224976e0fa8ddaa66f32d 14140 conservation-code_20110309.0-8.debian.tar.xz

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gpgv: Signature made Sun Dec 15 15:28:34 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./conservation-code_20110309.0-8.dsc: no acceptable signature found
dpkg-source: info: extracting conservation-code in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking conservation-code_20110309.0.orig.tar.xz
dpkg-source: info: unpacking conservation-code_20110309.0-8.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying examples
dpkg-source: info: applying script_name
dpkg-source: info: applying numpy.numarray
dpkg-source: info: applying default_matrix_path
dpkg-source: info: applying optimize_loop
dpkg-source: info: applying stockholm_format
dpkg-source: info: applying Python3-prints
dpkg-source: info: applying usage
dpkg-source: info: applying fix_load_identity_matrix
dpkg-source: info: applying 2to3.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=debusine-worker
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SHELL=/bin/sh
USER=debusine-worker

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -b -rfakeroot
dpkg-buildpackage: info: source package conservation-code
dpkg-buildpackage: info: source version 20110309.0-8
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --with python3
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f debian/score_conservation.1 ChangeLog
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean
 debian/rules binary
dh binary --with python3
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
sed -e 's|__docdir__|/usr/share/doc/conservation-code|g;s|__pkgdatadir__|/usr/share/conservation-code|g;s|__VERSION__|20110309.0|g;' "debian/score_conservation.1.pod" | \
pod2man -c 'User Commands' -r "20110309.0" -name DEBIAN/SCORE_CONSERVATION > "debian/score_conservation.1"
dh override_dh_auto_build --with python3
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   dh_auto_install --destdir=debian/conservation-code/
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -X._
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Courtesy of Jakub Wilk:
sed -n -e '/# [0-9/]\{8\}/ { s/# // p }' < score_conservation.py > ChangeLog
dh_installchangelogs
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installexamples
   dh_installman
   dh_python3
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   dh_missing
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'conservation-code' in '../conservation-code_20110309.0-8_all.deb'.
 dpkg-genbuildinfo --build=binary -O../conservation-code_20110309.0-8_arm64.buildinfo
 dpkg-genchanges --build=binary -O../conservation-code_20110309.0-8_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-11-15T22:49:27Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


conservation-code_20110309.0-8_arm64.changes:
---------------------------------------------

Format: 1.8
Date: Sun, 15 Dec 2019 16:24:28 +0100
Source: conservation-code
Binary: conservation-code
Architecture: all
Version: 20110309.0-8
Distribution: sid
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 conservation-code - protein sequence conservation scoring tool
Closes: 942925
Changes:
 conservation-code (20110309.0-8) unstable; urgency=medium
 .
   * Rename test dir in autopktest from ADTTMP to AUTOPKGTEST_TMP
   * Use 2to3 to port from Python2 to Python3
     Closes: #942925
   * debhelper-compat 12
   * Standards-Version: 4.4.1
   * Remove trailing whitespace in debian/changelog
   * Do not parse d/changelog
   * Trim trailing whitespace.
   * Use secure URI in Homepage field.
   * Remove obsolete fields Contact, Name from debian/upstream/metadata.
   * Remove unnecessary get-orig-source-target.
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Checksums-Sha256:
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Files:
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 5cb35085406f7c3fea70340fb8b569df 5777 science optional conservation-code_20110309.0-8_arm64.buildinfo

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
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Binary: conservation-code
Architecture: all
Version: 20110309.0-8
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Build-Origin: Debian
Build-Architecture: arm64
Build-Date: Fri, 15 Nov 2024 22:49:26 +0000
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+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


conservation-code_20110309.0-8_all.deb
--------------------------------------

 new Debian package, version 2.0.
 size 22792 bytes: control archive=2180 bytes.
    1405 bytes,    37 lines      control
    2601 bytes,    31 lines      md5sums
     325 bytes,    12 lines   *  postinst             #!/bin/sh
     382 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: conservation-code
 Version: 20110309.0-8
 Architecture: all
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 113
 Depends: python3:any, python3-numpy
 Enhances: concavity
 Section: science
 Priority: optional
 Homepage: https://compbio.cs.princeton.edu/conservation/
 Description: protein sequence conservation scoring tool
  This package provides score_conservation(1), a tool to score protein sequence
  conservation.
  .
  The following conservation scoring methods are implemented:
   * sum of pairs
   * weighted sum of pairs
   * Shannon entropy
   * Shannon entropy with property groupings (Mirny and Shakhnovich 1995,
     Valdar and Thornton 2001)
   * relative entropy with property groupings (Williamson 1995)
   * von Neumann entropy (Caffrey et al 2004)
   * relative entropy (Samudrala and Wang 2006)
   * Jensen-Shannon divergence (Capra and Singh 2007)
  .
  A window-based extension that incorporates the estimated conservation of
  sequentially adjacent residues into the score for each column is also given.
  This window approach can be applied to any of the conservation scoring
  methods.
  .
  The program accepts alignments in the CLUSTAL and FASTA formats.
  .
  The sequence-specific output can be used as the conservation input for
  concavity.
  .
  Conservation is highly predictive in identifying catalytic sites and
  residues near bound ligands.

drwxr-xr-x root/root         0 2019-12-15 15:24 ./
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/bin/
lrwxrwxrwx root/root         0 2019-12-15 15:24 ./usr/bin/score_conservation -> ../share/conservation-code/score_conservation.py
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/conservation-code/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/conservation-code/distributions/
-rw-r--r-- root/root       325 2007-01-28 01:50 ./usr/share/conservation-code/distributions/blosum62.distribution
-rw-r--r-- root/root       324 2007-12-18 02:09 ./usr/share/conservation-code/distributions/pf.distribution
-rw-r--r-- root/root       292 2007-01-28 01:49 ./usr/share/conservation-code/distributions/swissprot.distribution
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/conservation-code/matrix/
-rw-r--r-- root/root      2074 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum100.bla
-rw-r--r-- root/root      1753 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum100.qij
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum30.qij
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum35.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum35.qij
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum40.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum40.qij
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum45.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum45.qij
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum50.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum50.qij
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum62.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum62.qij
-rw-r--r-- root/root      2074 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum62_3.bla
-rw-r--r-- root/root      2072 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum80.bla
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosum80.qij
-rw-r--r-- root/root      1752 2005-11-03 17:18 ./usr/share/conservation-code/matrix/blosumn.qij
-rwxr-xr-x root/root     31866 2019-12-15 15:24 ./usr/share/conservation-code/score_conservation.py
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/doc/conservation-code/
-rw-r--r-- root/root      1911 2009-06-22 05:07 ./usr/share/doc/conservation-code/README
-rw-r--r-- root/root      2232 2019-12-15 15:24 ./usr/share/doc/conservation-code/README.test
-rw-r--r-- root/root      1005 2019-12-15 15:24 ./usr/share/doc/conservation-code/changelog.Debian.gz
-rw-r--r-- root/root       358 2019-12-15 15:24 ./usr/share/doc/conservation-code/changelog.gz
-rw-r--r-- root/root      1286 2019-12-15 15:24 ./usr/share/doc/conservation-code/copyright
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/doc/conservation-code/examples/
-rw-r--r-- root/root      2532 2019-12-15 15:24 ./usr/share/doc/conservation-code/examples/2plc__hssp-filtered.aln
-rw-r--r-- root/root       570 2019-12-15 15:24 ./usr/share/doc/conservation-code/installation-test
-rw-r--r-- root/root       845 2019-12-15 15:24 ./usr/share/doc/conservation-code/non-default-params-test
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/man/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/man/man1/
-rw-r--r-- root/root      2638 2019-12-15 15:24 ./usr/share/man/man1/score_conservation.1.gz
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/python3/
drwxr-xr-x root/root         0 2019-12-15 15:24 ./usr/share/python3/runtime.d/
-rwxr-xr-x root/root       173 2019-12-15 15:24 ./usr/share/python3/runtime.d/conservation-code.rtupdate


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Hint: either pass --root-owner-group, see dpkg-build-api(7) or add an explicit 'Rules-Requires-Root: no' in debian/control.
dpkg-deb: warning: ignoring 1 warning about the control file(s)
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Running lintian...
W: conservation-code changes: distribution-and-changes-mismatch sid unstable

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+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: arm64
Build Type: binary
Build-Space: 992
Build-Time: 13
Distribution: sid
Host Architecture: arm64
Install-Time: 25
Job: /tmp/debusine-fetch-exec-upload-uwfj9mh8/conservation-code_20110309.0-8.dsc
Lintian: warn
Machine Architecture: arm64
Package: conservation-code
Package-Time: 72
Source-Version: 20110309.0-8
Space: 992
Status: successful
Version: 20110309.0-8
--------------------------------------------------------------------------------
Finished at 2024-11-15T22:49:27Z
Build needed 00:01:12, 992k disk space

Relations

Relation Direction Type Name
relates-to Source package conservation-code_20110309.0-8
relates-to Binary package dpkg-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect-dbgsym_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dselect_1.22.12~1.gbp82cafd_arm64
relates-to Binary package libdpkg-dev_1.22.12~1.gbp82cafd_arm64
relates-to Binary package dpkg-dev_1.22.12~1.gbp82cafd_all
relates-to Binary package libdpkg-perl_1.22.12~1.gbp82cafd_all
relates-to Binary package conservation-code_20110309.0-8_all
relates-to Binary packages conservation-code_20110309.0-8

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