deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: all
Depends: python3-click, python3-coloredlogs, python3-future, python3-jinja2, python3-lzstring,
python3-markdown, python3-matplotlib, python3-networkx, python3-numpy, python3-requests,
python3-rich, python3-rich-click, python3-simplejson, python3-spectra, python3-yaml,
python3:any, python3-distutils, python3-humanfriendly (>= 8.1-2), fonts-glyphicons-halflings,
libjs-bootstrap, libjs-jquery, libjs-jquery-tablesorter, libjs-jquery-ui
Description: |-
output integration for RNA sequencing across tools and samples
The sequencing of DNA or RNA with current high-throughput technologies
involves an array of tools and these are applied over a range of samples.
It is easy to loose oversight. And gathering the data and forwarding
them in a readable manner to the individuals who took the samples is
a challenge for a tool in itself. Well. Here it is.
MultiQC aggregates the output of multiple tools into a single report.
.
Reports are generated by scanning given directories for recognised log
files. These are parsed and a single HTML report is generated summarising
the statistics for all logs found. MultiQC reports can describe multiple
analysis steps and large numbers of samples within a single plot, and
multiple analysis tools making it ideal for routine fast quality control.
Enhances: adapterremoval, afterqc, bamtools, bbmap, bcftools, bcl2fastq, biobambam2,
biobloomtools, biscuit, bismark, bowtie, bowtie2, busco, clipandmerge, clusterflow,
conpair, cutadapt, damageprofiler, dedup, deeptools, disambiguate, dragen, fastp,
fastq-screen, fastqc, featurecounts, fgbio, flash, flexbar, gatk, goleft-indexcov,
happy, hicexplorer, hicpro, hicup, hisat2, homer, htseq, interop, ivar, jellyfish,
kaiju, kallisto, kat, kraken, leehom, longranger, macs2, malt, methylqa, minionqc,
mirtop, mirtrace, mosdepth, mtnucratio, multivcfanalyzer, peddy, phantompeakqualtools,
picard-tools, preseq, prokka, pycoqc, qorts, qualimap, quast, rna-seqc, rna-star,
rockhopper, rsem, rseqc, salmon, samblaster, samtools, sargasso, seqyclean, sexdeterrmine,
sickle, skewer, slamdunk, snpeff, snpsplit, somalier, sortmerna, stacks, supernova,
theta2, tophat, trimmomatic, varscan2, vcftools, verifybamid
Homepage: https://multiqc.info/
Installed-Size: '3235'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: multiqc
Priority: optional
Recommends: node-clipboard, libjs-filesaver, pandoc, texlive-xetex
Section: science
Version: 1.14+dfsg-1
srcpkg_name: multiqc
srcpkg_version: 1.14+dfsg-1