deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: arm64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libmuscle1 (>= 3.7+4565),
libstdc++6 (>= 11), python3:any, python3-biopython, python3-numpy, fasttree, harvest-tools,
mummer, phipack, python3, raxml
Description: |-
rapid core genome multi-alignment
Parsnp was designed to align the core genome of hundreds to thousands of
bacterial genomes within a few minutes to few hours. Input can be both
draft assemblies and finished genomes, and output includes variant (SNP)
calls, core genome phylogeny and multi-alignments. Parsnp leverages
contextual information provided by multi-alignments surrounding SNP
sites for filtration/cleaning, in addition to existing tools for
recombination detection/filtration and phylogenetic reconstruction.
Homepage: https://harvest.readthedocs.org/en/latest/content/parsnp.html
Installed-Size: '1920'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: parsnp
Priority: optional
Recommends: python3-dendropy
Section: science
Version: 1.7.4+dfsg-2
srcpkg_name: parsnp
srcpkg_version: 1.7.4+dfsg-2