Artifact pilon_1.24-2_all

Metadata
deb_control_files:
- control
- md5sums
deb_fields:
  Architecture: all
  Conflicts: pilon-non-free
  Depends: default-jre, java-wrappers, libhtsjdk-java, libcommons-lang-java, scala-library
  Description: |-
    automated genome assembly improvement and variant detection tool
     Pilon is a software tool which can be used to:
      * Automatically improve draft assemblies
      * Find variation among strains, including large event detection
     Pilon requires as input a FASTA file of the genome along with one or more
     BAM files of reads aligned to the input FASTA file. Pilon uses read
     alignment analysis to identify inconsistencies between the input genome and
     the evidence in the reads. It then attempts to make improvements to the
     input genome, including:
      * Single base differences
      * Small indels
      * Larger indel or block substitution events
      * Gap filling
      * Identification of local misassemblies, including optional opening
        of new gaps
  Homepage: https://github.com/broadinstitute/pilon/wiki
  Installed-Size: '613'
  Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
  Package: pilon
  Priority: optional
  Replaces: pilon-non-free
  Section: science
  Version: 1.24-2
srcpkg_name: pilon
srcpkg_version: 1.24-2

File

pilon_1.24-2_all.deb
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Relations

Relation Direction Type Name
built-using Source package pilon_1.24-2

binary package System - - 5 months, 3 weeks ago 4 months, 3 weeks
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