deb_control_files:
- control
- md5sums
deb_fields:
Architecture: amd64
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0),
libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.4),
libgenome0 (>= 1.3.11+svn20110227.4616), libmems1 (>= 1.6.0+4725), libstdc++6
(>= 9)
Description: |-
multiple genome alignment algorithms
The mauveAligner and progressiveMauve alignment algorithms have been
implemented as command-line programs included with the downloadable Mauve
software. When run from the command-line, these programs provide options
not yet available in the graphical interface.
.
Mauve is a system for efficiently constructing multiple genome alignments
in the presence of large-scale evolutionary events such as rearrangement
and inversion. Multiple genome alignment provides a basis for research
into comparative genomics and the study of evolutionary dynamics. Aligning
whole genomes is a fundamentally different problem than aligning short
sequences.
.
Mauve has been developed with the idea that a multiple genome aligner
should require only modest computational resources. It employs algorithmic
techniques that scale well in the amount of sequence being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute,
while a group of 9 divergent Enterobacterial genomes can be aligned in
a few hours.
.
Mauve computes and interactively visualizes genome sequence comparisons.
Using FastA or GenBank sequence data, Mauve constructs multiple genome
alignments that identify large-scale rearrangement, gene gain, gene loss,
indels, and nucleotide substutition.
.
Mauve is developed at the University of Wisconsin.
Enhances: mauve-aligner
Homepage: https://darlinglab.org/mauve/user-guide/mauvealigner.html
Installed-Size: '5581'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: progressivemauve
Priority: optional
Section: science
Source: progressivemauve (1.2.0+4713+dfsg-5)
Version: 1.2.0+4713+dfsg-5+b1
srcpkg_name: progressivemauve
srcpkg_version: 1.2.0+4713+dfsg-5