deb_control_files:
- control
- md5sums
- postinst
- prerm
deb_fields:
Architecture: all
Depends: python3-numpy, python3-pandas, python3:any, python3-deprecated
Description: |-
simple math function for other Oxford Nanopore processing scripts
This Python3 module provides a few simple math and statistics functions for
other scripts processing Oxford Nanopore sequencing data.
.
* Calculate read N50 from a set of lengths get_N50(readlenghts)
* Remove extreme length outliers from a dataset
remove_length_outliers(dataframe, columname)
* Calculate the average Phred quality of a read ave_qual(qualscores)
* Write out the statistics report after calling readstats function
write_stats(dataframe, outputname)
* Compute a number of statistics, return a dictionary
calc_read_stats(dataframe)
Homepage: https://github.com/wdecoster/nanomath
Installed-Size: '38'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: python3-nanomath
Priority: optional
Section: python
Source: python-nanomath
Version: 1.2.1+ds-1
srcpkg_name: python-nanomath
srcpkg_version: 1.2.1+ds-1