deb_control_files:
- control
- md5sums
deb_fields:
Architecture: arm64
Depends: libbifrost0 (>= 1.3.1), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6
(>= 13.1), zlib1g (>= 1:1.1.4)
Description: |-
parallel construction, indexing and querying of de Bruijn graphs
Bifrost is a command-line tool for sequencing that features a broad
range of functions, such as indexing, editing, and querying the graph,
and includes a graph coloring method that maps each k-mer of the graph
to the genomes it occurs in.
.
* Build, index, color and query the compacted de Bruijn graph
* No need to build the uncompacted de Bruijn graph
* Reads or assembled genomes as input
* Output graph in GFA (can be visualized with Bandage), FASTA or binary
* Graph cleaning: short tip clipping, etc.
* Multi-threaded
* No parameters to estimate with other tools
* Exact or approximate k-mer search of queries
Homepage: https://github.com/pmelsted/bifrost
Installed-Size: '1173'
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Package: bifrost
Priority: optional
Section: python
Version: 1.3.1-1
srcpkg_name: bifrost
srcpkg_version: 1.3.1-1